Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04185 and AO356_04190 are separated by 936 nucleotides AO356_04190 and AO356_04195 are separated by 324 nucleotides
AO356_04185: AO356_04185 - transposase, at 938,197 to 938,898
_04185
AO356_04190: AO356_04190 - hypothetical protein, at 939,835 to 940,104
_04190
AO356_04195: AO356_04195 - adhesin, at 940,429 to 953,463
_04195
Position (kb) 939
940
941 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 938.852 kb on - strand at 938.852 kb on - strand at 938.880 kb on + strand at 938.880 kb on + strand at 938.881 kb on - strand at 938.898 kb on + strand at 938.899 kb on - strand at 938.932 kb on - strand at 939.027 kb on + strand at 939.084 kb on - strand at 939.110 kb on - strand at 939.111 kb on + strand at 939.186 kb on - strand at 939.186 kb on - strand at 939.399 kb on - strand at 939.561 kb on + strand at 939.562 kb on - strand at 939.562 kb on - strand at 939.562 kb on - strand at 939.626 kb on + strand at 939.650 kb on - strand at 939.674 kb on + strand at 939.683 kb on - strand at 939.774 kb on - strand at 940.122 kb on - strand at 940.290 kb on + strand at 940.365 kb on - strand at 940.369 kb on + strand at 940.406 kb on + strand at 940.432 kb on + strand at 940.432 kb on + strand at 940.471 kb on + strand at 940.471 kb on + strand at 940.472 kb on - strand at 940.530 kb on + strand at 940.534 kb on + strand at 940.534 kb on + strand at 940.535 kb on - strand at 940.535 kb on - strand at 940.535 kb on - strand at 940.546 kb on + strand at 940.546 kb on + strand at 940.546 kb on + strand at 940.547 kb on - strand at 940.549 kb on + strand at 940.596 kb on + strand at 940.597 kb on - strand at 940.597 kb on - strand at 940.623 kb on + strand at 940.623 kb on + strand at 940.623 kb on + strand at 940.624 kb on - strand at 940.624 kb on - strand at 940.624 kb on - strand at 940.624 kb on - strand at 940.624 kb on - strand at 940.624 kb on - strand at 940.624 kb on - strand at 940.694 kb on + strand at 940.695 kb on - strand at 940.779 kb on + strand at 940.780 kb on - strand at 941.041 kb on + strand at 941.041 kb on + strand at 941.041 kb on + strand at 941.041 kb on + strand at 941.042 kb on - strand at 941.042 kb on - strand at 941.042 kb on - strand at 941.042 kb on - strand at 941.042 kb on - strand at 941.042 kb on - strand at 941.042 kb on - strand at 941.042 kb on - strand at 941.042 kb on - strand at 941.058 kb on + strand at 941.058 kb on + strand at 941.058 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 938,852 - +0.6 938,852 - -0.7 938,880 + -0.1 938,880 + -0.1 938,881 - +0.7 938,898 + +0.9 938,899 - +1.7 938,932 - +0.6 939,027 + -2.8 939,084 - +0.5 939,110 - +0.9 939,111 + +0.1 939,186 - +1.8 939,186 - +0.1 939,399 - +0.2 939,561 + +0.1 939,562 - -0.1 939,562 - +0.4 939,562 - +0.7 939,626 + +0.3 939,650 - -0.2 939,674 + +0.1 939,683 - +1.3 939,774 - -0.6 940,122 - -1.5 940,290 + +0.4 940,365 - -0.1 940,369 + +0.2 940,406 + +0.2 940,432 + +0.1 940,432 + +0.1 940,471 + +0.3 940,471 + +0.1 940,472 - +1.2 940,530 + -0.3 940,534 + -0.9 940,534 + -1.2 940,535 - -0.5 940,535 - +0.2 940,535 - +0.8 940,546 + -0.1 940,546 + +0.7 940,546 + +0.8 940,547 - +0.9 940,549 + +1.0 940,596 + -0.3 940,597 - +1.0 940,597 - -1.5 940,623 + -0.6 940,623 + +0.5 940,623 + +0.2 940,624 - -0.5 940,624 - +0.3 940,624 - +0.8 940,624 - +0.7 940,624 - +0.6 940,624 - -1.4 940,624 - +0.6 940,694 + +0.1 940,695 - +0.5 940,779 + +1.3 940,780 - +0.5 941,041 + -1.1 941,041 + +0.3 941,041 + -0.7 941,041 + -0.4 941,042 - -1.8 941,042 - -0.2 941,042 - +1.7 941,042 - -0.1 941,042 - -1.2 941,042 - -0.7 941,042 - +0.1 941,042 - +1.4 941,042 - -0.2 941,058 + +0.2 941,058 + +0.4 941,058 + +0.5
Or see this region's nucleotide sequence