Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04165 and AO356_04170 are separated by 206 nucleotides AO356_04170 and AO356_04175 are separated by 501 nucleotides AO356_04175 and AO356_04180 are separated by 256 nucleotides AO356_04180 and AO356_04185 are separated by 68 nucleotides
AO356_04165: AO356_04165 - hypothetical protein, at 935,414 to 935,974
_04165
AO356_04170: AO356_04170 - hypothetical protein, at 936,181 to 936,360
_04170
AO356_04175: AO356_04175 - hypothetical protein, at 936,862 to 937,338
_04175
AO356_04180: AO356_04180 - hypothetical protein, at 937,595 to 938,128
_04180
AO356_04185: AO356_04185 - transposase, at 938,197 to 938,898
_04185
Position (kb)
936
937
938 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 935.884 kb on - strand, within AO356_04165 at 935.886 kb on + strand, within AO356_04165 at 935.886 kb on + strand, within AO356_04165 at 935.887 kb on - strand, within AO356_04165 at 935.887 kb on - strand, within AO356_04165 at 936.262 kb on - strand, within AO356_04170 at 936.927 kb on + strand, within AO356_04175 at 936.928 kb on - strand, within AO356_04175 at 936.968 kb on - strand, within AO356_04175 at 937.023 kb on + strand, within AO356_04175 at 937.050 kb on + strand, within AO356_04175 at 937.181 kb on + strand, within AO356_04175 at 937.181 kb on + strand, within AO356_04175 at 937.181 kb on + strand, within AO356_04175 at 937.182 kb on - strand, within AO356_04175 at 937.182 kb on - strand, within AO356_04175 at 937.182 kb on - strand, within AO356_04175 at 937.272 kb on + strand, within AO356_04175 at 937.311 kb on + strand at 937.312 kb on - strand at 937.363 kb on - strand at 937.379 kb on - strand at 937.388 kb on + strand at 937.388 kb on + strand at 937.406 kb on + strand at 937.526 kb on + strand at 937.527 kb on - strand at 937.540 kb on - strand at 937.561 kb on + strand at 937.737 kb on - strand, within AO356_04180 at 937.974 kb on - strand, within AO356_04180 at 937.974 kb on - strand, within AO356_04180 at 938.140 kb on + strand at 938.141 kb on - strand at 938.145 kb on + strand at 938.145 kb on + strand at 938.146 kb on - strand at 938.149 kb on - strand at 938.149 kb on - strand at 938.242 kb on + strand at 938.275 kb on + strand, within AO356_04185 at 938.275 kb on + strand, within AO356_04185 at 938.276 kb on - strand, within AO356_04185 at 938.276 kb on - strand, within AO356_04185 at 938.290 kb on - strand, within AO356_04185
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 935,884 - AO356_04165 0.84 -0.2 935,886 + AO356_04165 0.84 -0.4 935,886 + AO356_04165 0.84 -0.5 935,887 - AO356_04165 0.84 -1.5 935,887 - AO356_04165 0.84 -2.3 936,262 - AO356_04170 0.45 -0.6 936,927 + AO356_04175 0.14 -0.2 936,928 - AO356_04175 0.14 +0.7 936,968 - AO356_04175 0.22 +0.2 937,023 + AO356_04175 0.34 -1.0 937,050 + AO356_04175 0.39 +0.7 937,181 + AO356_04175 0.67 +0.2 937,181 + AO356_04175 0.67 -0.9 937,181 + AO356_04175 0.67 +0.1 937,182 - AO356_04175 0.67 +1.3 937,182 - AO356_04175 0.67 +1.1 937,182 - AO356_04175 0.67 +0.2 937,272 + AO356_04175 0.86 -0.8 937,311 + -0.8 937,312 - -1.1 937,363 - +0.6 937,379 - +0.4 937,388 + -0.4 937,388 + +0.2 937,406 + -0.0 937,526 + +0.9 937,527 - +1.2 937,540 - +2.7 937,561 + -0.8 937,737 - AO356_04180 0.27 +0.3 937,974 - AO356_04180 0.71 +0.7 937,974 - AO356_04180 0.71 +1.3 938,140 + -0.9 938,141 - -0.3 938,145 + +0.8 938,145 + -0.9 938,146 - +1.2 938,149 - +1.0 938,149 - -0.3 938,242 + -1.0 938,275 + AO356_04185 0.11 -0.6 938,275 + AO356_04185 0.11 +1.1 938,276 - AO356_04185 0.11 +0.5 938,276 - AO356_04185 0.11 -0.1 938,290 - AO356_04185 0.13 -0.4
Or see this region's nucleotide sequence