Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_03485

Experiment: Benzalkonium Chloride 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_03480 and AO356_03485 are separated by 106 nucleotidesAO356_03485 and AO356_03490 are separated by 61 nucleotidesAO356_03490 and AO356_03495 are separated by 4 nucleotides AO356_03480: AO356_03480 - methylthioribose-1-phosphate isomerase, at 776,696 to 777,772 _03480 AO356_03485: AO356_03485 - N-ethylammeline chlorohydrolase, at 777,879 to 779,210 _03485 AO356_03490: AO356_03490 - 3-demethylubiquinone-9 3-methyltransferase, at 779,272 to 779,970 _03490 AO356_03495: AO356_03495 - phosphoglycolate phosphatase, at 779,975 to 780,646 _03495 Position (kb) 777 778 779 780Strain fitness (log2 ratio) -2 -1 0 1 2 3at 776.991 kb on + strand, within AO356_03480at 776.991 kb on + strand, within AO356_03480at 776.991 kb on + strand, within AO356_03480at 776.991 kb on + strand, within AO356_03480at 776.991 kb on + strand, within AO356_03480at 776.991 kb on + strand, within AO356_03480at 776.991 kb on + strand, within AO356_03480at 776.991 kb on + strand, within AO356_03480at 777.079 kb on + strand, within AO356_03480at 777.079 kb on + strand, within AO356_03480at 777.080 kb on - strand, within AO356_03480at 777.211 kb on + strand, within AO356_03480at 777.213 kb on + strand, within AO356_03480at 777.213 kb on + strand, within AO356_03480at 777.213 kb on + strand, within AO356_03480at 777.213 kb on + strand, within AO356_03480at 777.213 kb on + strand, within AO356_03480at 777.213 kb on + strand, within AO356_03480at 777.213 kb on + strand, within AO356_03480at 777.213 kb on + strand, within AO356_03480at 777.213 kb on + strand, within AO356_03480at 777.214 kb on - strand, within AO356_03480at 777.214 kb on - strand, within AO356_03480at 777.214 kb on - strand, within AO356_03480at 777.214 kb on - strand, within AO356_03480at 777.214 kb on - strand, within AO356_03480at 777.214 kb on - strand, within AO356_03480at 777.226 kb on + strand, within AO356_03480at 777.332 kb on + strand, within AO356_03480at 777.579 kb on + strand, within AO356_03480at 777.580 kb on - strand, within AO356_03480at 777.580 kb on - strand, within AO356_03480at 777.691 kb on + strandat 777.691 kb on + strandat 777.691 kb on + strandat 777.691 kb on + strandat 777.691 kb on + strandat 777.691 kb on + strandat 777.692 kb on - strandat 777.692 kb on - strandat 777.692 kb on - strandat 777.692 kb on - strandat 777.692 kb on - strandat 777.692 kb on - strandat 777.692 kb on - strandat 777.692 kb on - strandat 777.692 kb on - strandat 777.692 kb on - strandat 777.692 kb on - strandat 777.708 kb on + strandat 777.708 kb on + strandat 777.708 kb on + strandat 777.709 kb on - strandat 777.709 kb on - strandat 777.709 kb on - strandat 777.758 kb on + strandat 777.759 kb on - strandat 777.808 kb on + strandat 777.809 kb on - strandat 777.811 kb on - strandat 777.811 kb on - strandat 777.811 kb on - strandat 777.811 kb on - strandat 777.811 kb on - strandat 777.839 kb on - strandat 777.840 kb on + strandat 777.840 kb on + strandat 777.840 kb on + strandat 777.840 kb on + strandat 777.855 kb on + strandat 777.855 kb on + strandat 777.855 kb on + strandat 777.855 kb on + strandat 777.855 kb on + strandat 777.907 kb on + strandat 777.907 kb on + strandat 777.907 kb on + strandat 777.907 kb on + strandat 777.907 kb on + strandat 777.907 kb on + strandat 777.907 kb on + strandat 777.907 kb on + strandat 777.908 kb on - strandat 777.910 kb on + strandat 777.910 kb on + strandat 777.952 kb on + strandat 777.952 kb on + strandat 777.952 kb on + strandat 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.275 kb on + strand, within AO356_03485at 778.467 kb on + strand, within AO356_03485at 778.469 kb on + strand, within AO356_03485at 778.469 kb on + strand, within AO356_03485at 778.469 kb on + strand, within AO356_03485at 778.469 kb on + strand, within AO356_03485at 778.469 kb on + strand, within AO356_03485at 778.469 kb on + strand, within AO356_03485at 778.535 kb on + strand, within AO356_03485at 778.535 kb on + strand, within AO356_03485at 778.535 kb on + strand, within AO356_03485at 778.535 kb on + strand, within AO356_03485at 778.535 kb on + strand, within AO356_03485at 778.535 kb on + strand, within AO356_03485at 778.536 kb on - strand, within AO356_03485at 778.536 kb on - strand, within AO356_03485at 778.691 kb on - strand, within AO356_03485at 779.040 kb on + strand, within AO356_03485at 779.040 kb on + strand, within AO356_03485at 779.040 kb on + strand, within AO356_03485at 779.041 kb on - strand, within AO356_03485at 779.065 kb on - strand, within AO356_03485at 779.968 kb on + strandat 779.968 kb on + strandat 779.968 kb on + strandat 779.968 kb on + strandat 779.968 kb on + strandat 780.207 kb on - strand, within AO356_03495

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Per-strain Table

Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml
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776,991 + AO356_03480 0.27 -2.3
776,991 + AO356_03480 0.27 -1.1
776,991 + AO356_03480 0.27 -0.8
776,991 + AO356_03480 0.27 +0.5
776,991 + AO356_03480 0.27 +3.1
776,991 + AO356_03480 0.27 +0.4
776,991 + AO356_03480 0.27 +0.4
776,991 + AO356_03480 0.27 +0.4
777,079 + AO356_03480 0.36 -2.5
777,079 + AO356_03480 0.36 +0.6
777,080 - AO356_03480 0.36 -0.6
777,211 + AO356_03480 0.48 -0.7
777,213 + AO356_03480 0.48 +0.5
777,213 + AO356_03480 0.48 -0.4
777,213 + AO356_03480 0.48 +1.8
777,213 + AO356_03480 0.48 +0.3
777,213 + AO356_03480 0.48 +0.6
777,213 + AO356_03480 0.48 -2.5
777,213 + AO356_03480 0.48 -0.4
777,213 + AO356_03480 0.48 -0.1
777,213 + AO356_03480 0.48 -1.0
777,214 - AO356_03480 0.48 +1.1
777,214 - AO356_03480 0.48 +0.4
777,214 - AO356_03480 0.48 -1.7
777,214 - AO356_03480 0.48 +0.7
777,214 - AO356_03480 0.48 +0.7
777,214 - AO356_03480 0.48 -0.2
777,226 + AO356_03480 0.49 +1.9
777,332 + AO356_03480 0.59 +0.4
777,579 + AO356_03480 0.82 -1.1
777,580 - AO356_03480 0.82 +0.2
777,580 - AO356_03480 0.82 -2.6
777,691 + -0.4
777,691 + -1.0
777,691 + -0.1
777,691 + +0.8
777,691 + -0.0
777,691 + -0.5
777,692 - -0.0
777,692 - -0.1
777,692 - +0.1
777,692 - -0.4
777,692 - -0.4
777,692 - +0.3
777,692 - +0.1
777,692 - -0.8
777,692 - -0.9
777,692 - +0.4
777,692 - +0.4
777,708 + -1.1
777,708 + -0.3
777,708 + -0.6
777,709 - +0.9
777,709 - -0.3
777,709 - +0.6
777,758 + -0.8
777,759 - +0.4
777,808 + -0.0
777,809 - +1.3
777,811 - +2.6
777,811 - +0.8
777,811 - +1.8
777,811 - +1.6
777,811 - +2.3
777,839 - +0.4
777,840 + -1.2
777,840 + +0.4
777,840 + -1.0
777,840 + -0.2
777,855 + -0.3
777,855 + -0.6
777,855 + -1.9
777,855 + +0.9
777,855 + -0.6
777,907 + +0.7
777,907 + +0.5
777,907 + +1.0
777,907 + +0.7
777,907 + +0.3
777,907 + -0.3
777,907 + +0.4
777,907 + +2.7
777,908 - +0.2
777,910 + +0.6
777,910 + +0.4
777,952 + -0.2
777,952 + -1.5
777,952 + -1.5
778,275 + AO356_03485 0.30 +0.6
778,275 + AO356_03485 0.30 +0.8
778,275 + AO356_03485 0.30 +0.2
778,275 + AO356_03485 0.30 -0.3
778,275 + AO356_03485 0.30 +0.1
778,275 + AO356_03485 0.30 +1.0
778,275 + AO356_03485 0.30 +0.2
778,275 + AO356_03485 0.30 +0.7
778,275 + AO356_03485 0.30 +0.3
778,275 + AO356_03485 0.30 -0.1
778,275 + AO356_03485 0.30 -0.1
778,275 + AO356_03485 0.30 +0.6
778,275 + AO356_03485 0.30 -0.3
778,275 + AO356_03485 0.30 +0.4
778,275 + AO356_03485 0.30 +0.3
778,275 + AO356_03485 0.30 +0.7
778,275 + AO356_03485 0.30 +0.3
778,275 + AO356_03485 0.30 -0.7
778,467 + AO356_03485 0.44 +1.2
778,469 + AO356_03485 0.44 +0.3
778,469 + AO356_03485 0.44 +0.6
778,469 + AO356_03485 0.44 +0.6
778,469 + AO356_03485 0.44 +0.6
778,469 + AO356_03485 0.44 +0.8
778,469 + AO356_03485 0.44 +0.4
778,535 + AO356_03485 0.49 +0.2
778,535 + AO356_03485 0.49 +1.2
778,535 + AO356_03485 0.49 +0.9
778,535 + AO356_03485 0.49 +0.4
778,535 + AO356_03485 0.49 -1.1
778,535 + AO356_03485 0.49 -0.5
778,536 - AO356_03485 0.49 +2.4
778,536 - AO356_03485 0.49 +0.4
778,691 - AO356_03485 0.61 +2.1
779,040 + AO356_03485 0.87 +0.4
779,040 + AO356_03485 0.87 +0.6
779,040 + AO356_03485 0.87 -1.2
779,041 - AO356_03485 0.87 +1.9
779,065 - AO356_03485 0.89 +1.8
779,968 + -0.2
779,968 + +0.9
779,968 + -0.3
779,968 + +1.4
779,968 + +0.4
780,207 - AO356_03495 0.35 +1.6

Or see this region's nucleotide sequence