Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03280 and AO356_03285 are separated by 105 nucleotides AO356_03285 and AO356_03290 are separated by 207 nucleotides
AO356_03280: AO356_03280 - metal-chelation protein CHAD, at 727,141 to 727,902
_03280
AO356_03285: AO356_03285 - hypothetical protein, at 728,008 to 728,298
_03285
AO356_03290: AO356_03290 - alpha/beta hydrolase, at 728,506 to 729,543
_03290
Position (kb) 728
729 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 727.064 kb on + strand at 727.064 kb on + strand at 727.064 kb on + strand at 727.064 kb on + strand at 727.065 kb on - strand at 727.065 kb on - strand at 727.079 kb on - strand at 727.079 kb on - strand at 727.079 kb on - strand at 727.131 kb on + strand at 727.131 kb on + strand at 727.131 kb on + strand at 727.131 kb on + strand at 727.131 kb on + strand at 727.132 kb on - strand at 727.365 kb on - strand, within AO356_03280 at 727.365 kb on - strand, within AO356_03280 at 727.615 kb on + strand, within AO356_03280 at 727.615 kb on + strand, within AO356_03280 at 727.615 kb on + strand, within AO356_03280 at 727.616 kb on - strand, within AO356_03280 at 727.616 kb on - strand, within AO356_03280 at 727.616 kb on - strand, within AO356_03280 at 727.661 kb on + strand, within AO356_03280 at 727.661 kb on + strand, within AO356_03280 at 727.661 kb on + strand, within AO356_03280 at 727.661 kb on + strand, within AO356_03280 at 727.662 kb on - strand, within AO356_03280 at 727.662 kb on - strand, within AO356_03280 at 727.662 kb on - strand, within AO356_03280 at 727.908 kb on + strand at 727.908 kb on + strand at 727.908 kb on + strand at 727.908 kb on + strand at 727.908 kb on + strand at 727.908 kb on + strand at 727.909 kb on - strand at 727.909 kb on - strand at 727.909 kb on - strand at 727.909 kb on - strand at 727.909 kb on - strand at 727.909 kb on - strand at 727.915 kb on + strand at 727.916 kb on - strand at 727.944 kb on + strand at 727.945 kb on - strand at 727.945 kb on - strand at 727.978 kb on + strand at 727.978 kb on + strand at 727.978 kb on + strand at 727.979 kb on - strand at 727.979 kb on - strand at 728.036 kb on + strand at 728.036 kb on + strand at 728.036 kb on + strand at 728.132 kb on + strand, within AO356_03285 at 728.212 kb on - strand, within AO356_03285 at 728.302 kb on + strand at 728.335 kb on + strand at 728.335 kb on + strand at 728.335 kb on + strand at 728.335 kb on + strand at 728.398 kb on + strand at 728.398 kb on + strand at 728.528 kb on + strand at 728.529 kb on - strand at 728.554 kb on + strand at 728.562 kb on + strand at 728.596 kb on + strand at 728.650 kb on + strand, within AO356_03290 at 728.651 kb on - strand, within AO356_03290 at 728.651 kb on - strand, within AO356_03290 at 728.651 kb on - strand, within AO356_03290 at 728.701 kb on + strand, within AO356_03290 at 728.701 kb on + strand, within AO356_03290 at 728.701 kb on + strand, within AO356_03290 at 728.701 kb on + strand, within AO356_03290 at 728.702 kb on - strand, within AO356_03290 at 728.824 kb on + strand, within AO356_03290 at 728.824 kb on + strand, within AO356_03290 at 728.824 kb on + strand, within AO356_03290
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 727,064 + +0.6 727,064 + -0.3 727,064 + +1.6 727,064 + -0.4 727,065 - +0.5 727,065 - -0.7 727,079 - -1.9 727,079 - -0.6 727,079 - +0.6 727,131 + -0.9 727,131 + +0.3 727,131 + -0.5 727,131 + +0.7 727,131 + +0.2 727,132 - +0.1 727,365 - AO356_03280 0.29 -0.5 727,365 - AO356_03280 0.29 +0.1 727,615 + AO356_03280 0.62 +0.6 727,615 + AO356_03280 0.62 -0.3 727,615 + AO356_03280 0.62 +0.0 727,616 - AO356_03280 0.62 +0.9 727,616 - AO356_03280 0.62 +0.3 727,616 - AO356_03280 0.62 -0.2 727,661 + AO356_03280 0.68 -1.0 727,661 + AO356_03280 0.68 +1.1 727,661 + AO356_03280 0.68 +0.8 727,661 + AO356_03280 0.68 +1.3 727,662 - AO356_03280 0.68 +1.2 727,662 - AO356_03280 0.68 -0.6 727,662 - AO356_03280 0.68 +0.5 727,908 + +0.9 727,908 + -0.2 727,908 + +1.6 727,908 + -1.0 727,908 + +0.3 727,908 + -0.3 727,909 - +0.2 727,909 - -0.9 727,909 - -0.8 727,909 - -1.5 727,909 - +0.8 727,909 - -1.4 727,915 + +1.1 727,916 - +1.0 727,944 + +0.5 727,945 - +0.7 727,945 - +0.0 727,978 + +0.7 727,978 + -1.2 727,978 + +1.2 727,979 - +0.7 727,979 - -0.6 728,036 + +0.3 728,036 + -0.2 728,036 + -0.7 728,132 + AO356_03285 0.43 +0.2 728,212 - AO356_03285 0.70 +1.0 728,302 + -0.4 728,335 + -0.7 728,335 + +0.2 728,335 + +0.6 728,335 + +0.3 728,398 + -0.1 728,398 + -0.2 728,528 + -1.1 728,529 - -0.6 728,554 + -1.2 728,562 + -0.9 728,596 + +0.2 728,650 + AO356_03290 0.14 +0.4 728,651 - AO356_03290 0.14 -0.5 728,651 - AO356_03290 0.14 -0.4 728,651 - AO356_03290 0.14 -3.0 728,701 + AO356_03290 0.19 +0.1 728,701 + AO356_03290 0.19 -0.7 728,701 + AO356_03290 0.19 -1.5 728,701 + AO356_03290 0.19 +0.6 728,702 - AO356_03290 0.19 -3.1 728,824 + AO356_03290 0.31 -0.3 728,824 + AO356_03290 0.31 -0.2 728,824 + AO356_03290 0.31 +1.1
Or see this region's nucleotide sequence