Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01760 and AO356_01765 are separated by 58 nucleotides AO356_01765 and AO356_01770 are separated by 41 nucleotides AO356_01770 and AO356_01775 are separated by 281 nucleotides AO356_01775 and AO356_01780 are separated by 331 nucleotides
AO356_01760: AO356_01760 - tRNA-Leu, at 398,235 to 398,319
_01760
AO356_01765: AO356_01765 - tRNA-His, at 398,378 to 398,453
_01765
AO356_01770: AO356_01770 - tRNA-Arg, at 398,495 to 398,571
_01770
AO356_01775: AO356_01775 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase, at 398,853 to 399,707
_01775
AO356_01780: AO356_01780 - D-alanyl-D-alanine endopeptidase, at 400,039 to 400,977
_01780
Position (kb)
398
399
400 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 397.878 kb on + strand at 397.878 kb on + strand at 397.878 kb on + strand at 397.879 kb on - strand at 397.879 kb on - strand at 397.879 kb on - strand at 397.879 kb on - strand at 397.879 kb on - strand at 397.881 kb on + strand at 397.881 kb on + strand at 397.882 kb on - strand at 397.906 kb on - strand at 397.906 kb on - strand at 397.978 kb on + strand at 398.016 kb on + strand at 398.016 kb on + strand at 398.016 kb on + strand at 398.016 kb on + strand at 398.016 kb on + strand at 398.016 kb on + strand at 398.016 kb on + strand at 398.016 kb on + strand at 398.017 kb on - strand at 398.017 kb on - strand at 398.017 kb on - strand at 398.017 kb on - strand at 398.017 kb on - strand at 398.018 kb on + strand at 398.018 kb on + strand at 398.018 kb on + strand at 398.018 kb on + strand at 398.018 kb on + strand at 398.018 kb on + strand at 398.018 kb on + strand at 398.018 kb on + strand at 398.019 kb on - strand at 398.019 kb on - strand at 398.019 kb on - strand at 398.019 kb on - strand at 398.020 kb on + strand at 398.020 kb on + strand at 398.020 kb on + strand at 398.020 kb on + strand at 398.020 kb on + strand at 398.021 kb on - strand at 398.021 kb on - strand at 398.021 kb on - strand at 398.021 kb on - strand at 398.021 kb on - strand at 398.021 kb on - strand at 398.021 kb on - strand at 398.021 kb on - strand at 398.021 kb on - strand at 398.021 kb on - strand at 398.022 kb on + strand at 398.022 kb on + strand at 398.022 kb on + strand at 398.022 kb on + strand at 398.022 kb on + strand at 398.022 kb on + strand at 398.023 kb on - strand at 398.023 kb on - strand at 398.023 kb on - strand at 398.023 kb on - strand at 398.023 kb on - strand at 398.023 kb on - strand at 398.023 kb on - strand at 398.023 kb on - strand at 398.023 kb on - strand at 398.078 kb on + strand at 398.078 kb on + strand at 398.197 kb on + strand at 398.220 kb on - strand at 398.233 kb on + strand at 398.233 kb on + strand at 398.233 kb on + strand at 398.234 kb on - strand at 398.234 kb on - strand at 398.234 kb on - strand at 398.234 kb on - strand at 398.234 kb on - strand at 398.355 kb on - strand at 398.355 kb on - strand at 398.372 kb on - strand at 398.473 kb on - strand at 398.606 kb on - strand at 399.701 kb on + strand at 399.701 kb on + strand at 399.701 kb on + strand at 399.702 kb on - strand at 399.868 kb on - strand at 399.868 kb on - strand at 399.908 kb on + strand at 399.915 kb on + strand at 399.915 kb on + strand at 399.916 kb on - strand at 399.920 kb on - strand at 399.920 kb on - strand at 399.920 kb on - strand at 399.938 kb on + strand at 399.946 kb on + strand at 399.946 kb on + strand at 399.946 kb on + strand at 399.946 kb on + strand at 399.946 kb on + strand at 399.946 kb on + strand at 399.946 kb on + strand at 399.946 kb on + strand at 399.947 kb on - strand at 399.947 kb on - strand at 399.947 kb on - strand at 399.948 kb on + strand at 399.948 kb on + strand at 399.949 kb on - strand at 399.949 kb on - strand at 399.966 kb on + strand at 399.967 kb on - strand at 399.967 kb on - strand at 399.967 kb on - strand at 399.972 kb on + strand at 399.972 kb on + strand at 399.972 kb on + strand at 399.973 kb on - strand at 399.973 kb on - strand at 399.991 kb on + strand at 400.032 kb on + strand at 400.197 kb on + strand, within AO356_01780 at 400.303 kb on + strand, within AO356_01780 at 400.303 kb on + strand, within AO356_01780 at 400.303 kb on + strand, within AO356_01780 at 400.304 kb on - strand, within AO356_01780 at 400.304 kb on - strand, within AO356_01780 at 400.391 kb on + strand, within AO356_01780 at 400.391 kb on + strand, within AO356_01780 at 400.392 kb on - strand, within AO356_01780 at 400.392 kb on - strand, within AO356_01780 at 400.392 kb on - strand, within AO356_01780 at 400.392 kb on - strand, within AO356_01780 at 400.525 kb on + strand, within AO356_01780 at 400.525 kb on + strand, within AO356_01780 at 400.526 kb on - strand, within AO356_01780 at 400.606 kb on + strand, within AO356_01780 at 400.606 kb on + strand, within AO356_01780 at 400.630 kb on - strand, within AO356_01780 at 400.669 kb on + strand, within AO356_01780 at 400.669 kb on + strand, within AO356_01780 at 400.670 kb on - strand, within AO356_01780 at 400.670 kb on - strand, within AO356_01780
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 397,878 + +1.9 397,878 + -0.7 397,878 + -1.6 397,879 - -0.5 397,879 - -0.6 397,879 - -3.0 397,879 - +0.1 397,879 - -0.2 397,881 + -2.0 397,881 + -1.7 397,882 - -0.0 397,906 - -0.5 397,906 - -1.3 397,978 + -2.7 398,016 + -0.4 398,016 + -3.4 398,016 + -0.9 398,016 + -0.7 398,016 + -0.2 398,016 + -0.6 398,016 + -1.2 398,016 + -0.5 398,017 - -0.1 398,017 - -0.9 398,017 - -1.0 398,017 - +2.2 398,017 - -2.7 398,018 + -0.0 398,018 + -0.1 398,018 + -1.9 398,018 + +0.5 398,018 + -1.4 398,018 + -1.1 398,018 + -1.7 398,018 + -2.3 398,019 - +0.5 398,019 - +0.4 398,019 - +0.4 398,019 - +0.1 398,020 + -1.8 398,020 + +0.3 398,020 + -0.2 398,020 + -0.5 398,020 + -1.8 398,021 - +1.2 398,021 - +0.4 398,021 - -0.0 398,021 - +1.1 398,021 - -1.2 398,021 - +0.0 398,021 - +0.4 398,021 - -1.1 398,021 - +1.9 398,021 - -1.5 398,022 + -0.1 398,022 + -0.6 398,022 + -1.8 398,022 + +0.0 398,022 + -1.2 398,022 + -0.1 398,023 - +0.3 398,023 - -0.1 398,023 - +0.3 398,023 - -1.6 398,023 - +0.7 398,023 - -1.9 398,023 - -0.4 398,023 - -2.1 398,023 - +1.5 398,078 + -0.9 398,078 + -1.6 398,197 + -0.4 398,220 - -0.3 398,233 + -1.1 398,233 + -1.1 398,233 + -0.9 398,234 - -0.2 398,234 - -0.2 398,234 - +0.2 398,234 - -1.0 398,234 - +0.1 398,355 - -0.4 398,355 - -0.7 398,372 - +0.6 398,473 - -1.9 398,606 - +0.2 399,701 + +0.4 399,701 + -1.6 399,701 + +1.1 399,702 - +0.1 399,868 - -0.4 399,868 - -0.1 399,908 + -0.6 399,915 + -2.4 399,915 + -1.1 399,916 - +0.7 399,920 - -1.2 399,920 - -2.9 399,920 - +0.1 399,938 + -0.5 399,946 + -0.1 399,946 + -0.1 399,946 + +0.7 399,946 + -1.2 399,946 + +1.3 399,946 + +0.2 399,946 + +0.0 399,946 + +0.5 399,947 - -0.9 399,947 - -2.1 399,947 - -0.0 399,948 + -1.3 399,948 + +1.0 399,949 - -1.7 399,949 - -0.4 399,966 + -1.0 399,967 - -0.2 399,967 - +0.0 399,967 - +0.2 399,972 + -0.0 399,972 + +0.3 399,972 + +0.9 399,973 - -0.5 399,973 - -0.5 399,991 + -1.7 400,032 + +0.9 400,197 + AO356_01780 0.17 -0.7 400,303 + AO356_01780 0.28 -2.7 400,303 + AO356_01780 0.28 +0.1 400,303 + AO356_01780 0.28 -0.6 400,304 - AO356_01780 0.28 -0.6 400,304 - AO356_01780 0.28 -0.6 400,391 + AO356_01780 0.37 -2.3 400,391 + AO356_01780 0.37 -1.9 400,392 - AO356_01780 0.38 -0.7 400,392 - AO356_01780 0.38 -1.9 400,392 - AO356_01780 0.38 -0.6 400,392 - AO356_01780 0.38 -3.7 400,525 + AO356_01780 0.52 -0.9 400,525 + AO356_01780 0.52 +1.5 400,526 - AO356_01780 0.52 -0.7 400,606 + AO356_01780 0.60 -0.9 400,606 + AO356_01780 0.60 -0.9 400,630 - AO356_01780 0.63 -2.2 400,669 + AO356_01780 0.67 -1.2 400,669 + AO356_01780 0.67 -1.1 400,670 - AO356_01780 0.67 -1.4 400,670 - AO356_01780 0.67 +0.3
Or see this region's nucleotide sequence