Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01295 and AO356_01300 are separated by 187 nucleotides AO356_01300 and AO356_01305 are separated by 270 nucleotides
AO356_01295: AO356_01295 - class C beta-lactamase, at 300,909 to 302,057
_01295
AO356_01300: AO356_01300 - tyrosyl-trna synthetase, at 302,245 to 302,793
_01300
AO356_01305: AO356_01305 - hypothetical protein, at 303,064 to 303,849
_01305
Position (kb)
302
303 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 301.299 kb on + strand, within AO356_01295 at 301.365 kb on + strand, within AO356_01295 at 301.365 kb on + strand, within AO356_01295 at 301.366 kb on - strand, within AO356_01295 at 301.369 kb on - strand, within AO356_01295 at 301.369 kb on - strand, within AO356_01295 at 301.369 kb on - strand, within AO356_01295 at 301.369 kb on - strand, within AO356_01295 at 301.369 kb on - strand, within AO356_01295 at 301.413 kb on + strand, within AO356_01295 at 301.414 kb on - strand, within AO356_01295 at 301.527 kb on + strand, within AO356_01295 at 301.527 kb on + strand, within AO356_01295 at 301.527 kb on + strand, within AO356_01295 at 301.527 kb on + strand, within AO356_01295 at 301.527 kb on + strand, within AO356_01295 at 301.527 kb on + strand, within AO356_01295 at 301.527 kb on + strand, within AO356_01295 at 301.527 kb on + strand, within AO356_01295 at 301.527 kb on + strand, within AO356_01295 at 301.527 kb on + strand, within AO356_01295 at 301.527 kb on + strand, within AO356_01295 at 301.527 kb on + strand, within AO356_01295 at 301.528 kb on - strand, within AO356_01295 at 301.528 kb on - strand, within AO356_01295 at 301.528 kb on - strand, within AO356_01295 at 301.528 kb on - strand, within AO356_01295 at 301.528 kb on - strand, within AO356_01295 at 301.528 kb on - strand, within AO356_01295 at 301.528 kb on - strand, within AO356_01295 at 301.528 kb on - strand, within AO356_01295 at 301.528 kb on - strand, within AO356_01295 at 301.528 kb on - strand, within AO356_01295 at 301.734 kb on - strand, within AO356_01295 at 301.743 kb on + strand, within AO356_01295 at 301.743 kb on + strand, within AO356_01295 at 301.744 kb on - strand, within AO356_01295 at 301.744 kb on - strand, within AO356_01295 at 301.785 kb on + strand, within AO356_01295 at 301.785 kb on + strand, within AO356_01295 at 301.786 kb on - strand, within AO356_01295 at 301.938 kb on + strand, within AO356_01295 at 301.939 kb on - strand, within AO356_01295 at 301.995 kb on + strand at 301.995 kb on + strand at 301.996 kb on - strand at 301.996 kb on - strand at 301.996 kb on - strand at 302.055 kb on + strand at 302.055 kb on + strand at 302.073 kb on + strand at 302.074 kb on - strand at 302.217 kb on + strand at 302.562 kb on + strand, within AO356_01300 at 302.576 kb on + strand, within AO356_01300 at 302.576 kb on + strand, within AO356_01300 at 302.577 kb on - strand, within AO356_01300 at 302.577 kb on - strand, within AO356_01300 at 302.577 kb on - strand, within AO356_01300 at 302.664 kb on + strand, within AO356_01300 at 302.766 kb on + strand at 302.810 kb on + strand at 302.811 kb on - strand at 302.811 kb on - strand at 302.814 kb on + strand at 302.814 kb on + strand at 302.814 kb on + strand at 302.814 kb on + strand at 302.815 kb on - strand at 302.815 kb on - strand at 302.815 kb on - strand at 302.815 kb on - strand at 302.815 kb on - strand at 302.815 kb on - strand at 302.821 kb on + strand at 302.822 kb on - strand at 302.865 kb on + strand at 302.891 kb on - strand at 303.136 kb on - strand at 303.136 kb on - strand at 303.161 kb on + strand, within AO356_01305 at 303.161 kb on + strand, within AO356_01305 at 303.161 kb on + strand, within AO356_01305 at 303.161 kb on + strand, within AO356_01305 at 303.161 kb on + strand, within AO356_01305 at 303.162 kb on - strand, within AO356_01305 at 303.162 kb on - strand, within AO356_01305 at 303.162 kb on - strand, within AO356_01305 at 303.162 kb on - strand, within AO356_01305 at 303.162 kb on - strand, within AO356_01305 at 303.311 kb on + strand, within AO356_01305 at 303.434 kb on + strand, within AO356_01305 at 303.434 kb on + strand, within AO356_01305 at 303.434 kb on + strand, within AO356_01305 at 303.435 kb on - strand, within AO356_01305 at 303.435 kb on - strand, within AO356_01305 at 303.435 kb on - strand, within AO356_01305 at 303.435 kb on - strand, within AO356_01305 at 303.687 kb on + strand, within AO356_01305 at 303.698 kb on + strand, within AO356_01305
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 301,299 + AO356_01295 0.34 -1.0 301,365 + AO356_01295 0.40 +0.1 301,365 + AO356_01295 0.40 -2.5 301,366 - AO356_01295 0.40 -0.2 301,369 - AO356_01295 0.40 -0.4 301,369 - AO356_01295 0.40 -0.1 301,369 - AO356_01295 0.40 +0.9 301,369 - AO356_01295 0.40 +0.5 301,369 - AO356_01295 0.40 -1.0 301,413 + AO356_01295 0.44 -1.1 301,414 - AO356_01295 0.44 -0.1 301,527 + AO356_01295 0.54 -2.1 301,527 + AO356_01295 0.54 -1.1 301,527 + AO356_01295 0.54 -0.4 301,527 + AO356_01295 0.54 +1.2 301,527 + AO356_01295 0.54 -0.4 301,527 + AO356_01295 0.54 -0.6 301,527 + AO356_01295 0.54 +0.7 301,527 + AO356_01295 0.54 -0.8 301,527 + AO356_01295 0.54 +0.3 301,527 + AO356_01295 0.54 -0.9 301,527 + AO356_01295 0.54 -0.1 301,527 + AO356_01295 0.54 +0.5 301,528 - AO356_01295 0.54 -0.3 301,528 - AO356_01295 0.54 -0.9 301,528 - AO356_01295 0.54 -0.8 301,528 - AO356_01295 0.54 +1.3 301,528 - AO356_01295 0.54 -0.0 301,528 - AO356_01295 0.54 +0.3 301,528 - AO356_01295 0.54 +1.8 301,528 - AO356_01295 0.54 -0.8 301,528 - AO356_01295 0.54 -0.6 301,528 - AO356_01295 0.54 +0.7 301,734 - AO356_01295 0.72 -1.5 301,743 + AO356_01295 0.73 +0.4 301,743 + AO356_01295 0.73 +0.6 301,744 - AO356_01295 0.73 -0.6 301,744 - AO356_01295 0.73 +0.3 301,785 + AO356_01295 0.76 +0.3 301,785 + AO356_01295 0.76 +0.0 301,786 - AO356_01295 0.76 -1.0 301,938 + AO356_01295 0.90 +1.0 301,939 - AO356_01295 0.90 +1.6 301,995 + +1.0 301,995 + -0.7 301,996 - +0.1 301,996 - -0.9 301,996 - -0.7 302,055 + +0.8 302,055 + +1.3 302,073 + +0.6 302,074 - +0.7 302,217 + +0.2 302,562 + AO356_01300 0.58 +0.2 302,576 + AO356_01300 0.60 -0.2 302,576 + AO356_01300 0.60 +1.3 302,577 - AO356_01300 0.60 +1.1 302,577 - AO356_01300 0.60 +1.5 302,577 - AO356_01300 0.60 +1.3 302,664 + AO356_01300 0.76 -0.6 302,766 + -0.0 302,810 + +1.3 302,811 - -1.4 302,811 - +0.5 302,814 + -1.0 302,814 + +0.7 302,814 + -1.1 302,814 + -0.5 302,815 - +0.4 302,815 - -0.7 302,815 - +0.3 302,815 - +0.5 302,815 - +1.2 302,815 - +1.1 302,821 + +1.1 302,822 - -0.6 302,865 + +2.0 302,891 - +0.5 303,136 - +0.5 303,136 - +0.2 303,161 + AO356_01305 0.12 +0.9 303,161 + AO356_01305 0.12 -0.8 303,161 + AO356_01305 0.12 -0.4 303,161 + AO356_01305 0.12 -0.0 303,161 + AO356_01305 0.12 +0.7 303,162 - AO356_01305 0.12 -0.4 303,162 - AO356_01305 0.12 +0.3 303,162 - AO356_01305 0.12 +1.5 303,162 - AO356_01305 0.12 -1.2 303,162 - AO356_01305 0.12 +0.6 303,311 + AO356_01305 0.31 +0.5 303,434 + AO356_01305 0.47 +0.3 303,434 + AO356_01305 0.47 +1.2 303,434 + AO356_01305 0.47 -0.3 303,435 - AO356_01305 0.47 +1.0 303,435 - AO356_01305 0.47 +0.7 303,435 - AO356_01305 0.47 +0.5 303,435 - AO356_01305 0.47 -1.0 303,687 + AO356_01305 0.79 +1.2 303,698 + AO356_01305 0.81 -2.0
Or see this region's nucleotide sequence