Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00820 and AO356_00825 are separated by 118 nucleotides
AO356_00820: AO356_00820 - alcohol dehydrogenase, at 185,791 to 186,831
_00820
AO356_00825: AO356_00825 - hypothetical protein, at 186,950 to 187,189
_00825
Position (kb)
186
187
188 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 185.997 kb on + strand, within AO356_00820 at 185.997 kb on + strand, within AO356_00820 at 185.998 kb on - strand, within AO356_00820 at 185.998 kb on - strand, within AO356_00820 at 186.075 kb on + strand, within AO356_00820 at 186.075 kb on + strand, within AO356_00820 at 186.076 kb on - strand, within AO356_00820 at 186.099 kb on + strand, within AO356_00820 at 186.099 kb on + strand, within AO356_00820 at 186.100 kb on - strand, within AO356_00820 at 186.144 kb on + strand, within AO356_00820 at 186.144 kb on + strand, within AO356_00820 at 186.145 kb on - strand, within AO356_00820 at 186.470 kb on + strand, within AO356_00820 at 186.471 kb on - strand, within AO356_00820 at 186.471 kb on - strand, within AO356_00820 at 186.471 kb on - strand, within AO356_00820 at 186.471 kb on - strand, within AO356_00820 at 186.721 kb on + strand, within AO356_00820 at 186.721 kb on + strand, within AO356_00820 at 186.816 kb on - strand at 186.934 kb on + strand at 186.934 kb on + strand at 186.935 kb on - strand at 186.935 kb on - strand at 186.935 kb on - strand at 186.951 kb on + strand at 186.952 kb on - strand at 186.952 kb on - strand at 186.952 kb on - strand at 186.953 kb on + strand at 186.953 kb on + strand at 186.954 kb on - strand at 186.959 kb on - strand at 186.973 kb on - strand at 186.990 kb on - strand, within AO356_00825 at 187.025 kb on - strand, within AO356_00825 at 187.091 kb on - strand, within AO356_00825 at 187.092 kb on + strand, within AO356_00825 at 187.093 kb on - strand, within AO356_00825 at 187.093 kb on - strand, within AO356_00825 at 187.149 kb on - strand, within AO356_00825 at 187.149 kb on - strand, within AO356_00825 at 187.184 kb on + strand at 187.191 kb on + strand at 187.191 kb on + strand at 187.192 kb on - strand at 187.192 kb on - strand at 187.192 kb on - strand at 187.200 kb on + strand at 187.201 kb on - strand at 187.212 kb on + strand at 187.310 kb on + strand at 187.311 kb on - strand at 187.319 kb on + strand at 187.320 kb on - strand at 187.389 kb on - strand at 187.492 kb on + strand at 187.492 kb on + strand at 187.493 kb on - strand at 187.575 kb on + strand at 187.575 kb on + strand at 187.576 kb on - strand at 187.576 kb on - strand at 187.576 kb on - strand at 187.576 kb on - strand at 187.579 kb on + strand at 187.579 kb on + strand at 187.579 kb on + strand at 187.579 kb on + strand at 187.579 kb on + strand at 187.580 kb on - strand at 187.580 kb on - strand at 187.580 kb on - strand at 187.580 kb on - strand at 187.638 kb on + strand at 187.638 kb on + strand at 187.639 kb on - strand at 187.748 kb on - strand at 187.767 kb on + strand at 187.767 kb on + strand at 187.768 kb on - strand at 187.768 kb on - strand at 187.771 kb on + strand at 187.772 kb on - strand at 187.772 kb on - strand at 187.772 kb on - strand at 187.772 kb on - strand at 187.774 kb on + strand at 187.775 kb on - strand at 187.776 kb on + strand at 187.776 kb on + strand at 187.776 kb on + strand at 187.777 kb on - strand at 187.777 kb on - strand at 187.810 kb on + strand at 187.877 kb on - strand at 187.984 kb on + strand at 187.997 kb on - strand at 188.000 kb on - strand at 188.000 kb on - strand at 188.004 kb on + strand at 188.091 kb on - strand at 188.096 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 185,997 + AO356_00820 0.20 +0.2 185,997 + AO356_00820 0.20 +0.9 185,998 - AO356_00820 0.20 -0.4 185,998 - AO356_00820 0.20 +0.1 186,075 + AO356_00820 0.27 +0.6 186,075 + AO356_00820 0.27 +1.2 186,076 - AO356_00820 0.27 -1.8 186,099 + AO356_00820 0.30 +0.8 186,099 + AO356_00820 0.30 +0.5 186,100 - AO356_00820 0.30 +0.3 186,144 + AO356_00820 0.34 +0.7 186,144 + AO356_00820 0.34 -0.6 186,145 - AO356_00820 0.34 +0.7 186,470 + AO356_00820 0.65 +0.2 186,471 - AO356_00820 0.65 -1.8 186,471 - AO356_00820 0.65 -1.5 186,471 - AO356_00820 0.65 -0.8 186,471 - AO356_00820 0.65 +0.7 186,721 + AO356_00820 0.89 +1.2 186,721 + AO356_00820 0.89 -0.3 186,816 - -0.5 186,934 + -0.8 186,934 + -1.9 186,935 - +0.5 186,935 - +0.7 186,935 - +0.3 186,951 + -0.3 186,952 - +0.7 186,952 - +0.4 186,952 - +0.4 186,953 + +0.4 186,953 + -0.0 186,954 - +1.5 186,959 - +0.6 186,973 - +0.6 186,990 - AO356_00825 0.17 -0.5 187,025 - AO356_00825 0.31 -0.6 187,091 - AO356_00825 0.59 +1.1 187,092 + AO356_00825 0.59 +0.4 187,093 - AO356_00825 0.60 +0.3 187,093 - AO356_00825 0.60 +0.4 187,149 - AO356_00825 0.83 +1.1 187,149 - AO356_00825 0.83 +0.0 187,184 + +0.4 187,191 + +1.4 187,191 + -0.4 187,192 - +0.1 187,192 - +0.0 187,192 - +1.2 187,200 + -0.7 187,201 - -0.1 187,212 + +1.5 187,310 + -0.1 187,311 - -0.7 187,319 + +0.1 187,320 - -0.6 187,389 - +0.5 187,492 + +0.2 187,492 + +0.1 187,493 - -0.2 187,575 + +0.1 187,575 + -1.2 187,576 - -0.1 187,576 - +0.8 187,576 - -0.7 187,576 - +1.9 187,579 + +0.4 187,579 + +0.5 187,579 + +1.6 187,579 + +0.9 187,579 + +0.0 187,580 - +2.0 187,580 - +0.2 187,580 - +0.8 187,580 - +0.5 187,638 + -2.5 187,638 + +1.1 187,639 - -0.0 187,748 - -1.6 187,767 + -2.5 187,767 + +0.5 187,768 - +0.8 187,768 - +0.5 187,771 + +1.1 187,772 - +0.4 187,772 - -1.5 187,772 - +0.3 187,772 - -0.1 187,774 + -2.8 187,775 - -0.9 187,776 + +1.7 187,776 + +0.5 187,776 + -0.7 187,777 - -1.0 187,777 - +0.3 187,810 + +0.5 187,877 - -0.2 187,984 + +0.2 187,997 - +0.0 188,000 - +0.1 188,000 - +0.6 188,004 + -0.2 188,091 - +0.3 188,096 + +0.4
Or see this region's nucleotide sequence