Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00230 and AO356_00235 overlap by 38 nucleotides AO356_00235 and AO356_00240 overlap by 1 nucleotides
AO356_00230: AO356_00230 - conjugal transfer protein, at 40,782 to 42,299
_00230
AO356_00235: AO356_00235 - conjugal transfer protein, at 42,262 to 42,678
_00235
AO356_00240: AO356_00240 - conjugal transfer protein, at 42,678 to 45,425
_00240
Position (kb) 42
43 Strain fitness (log2 ratio) -2
-1
0
1
2 at 41.411 kb on + strand, within AO356_00230 at 41.473 kb on + strand, within AO356_00230 at 41.523 kb on - strand, within AO356_00230 at 41.544 kb on + strand, within AO356_00230 at 41.646 kb on - strand, within AO356_00230 at 41.777 kb on + strand, within AO356_00230 at 41.777 kb on + strand, within AO356_00230 at 41.778 kb on - strand, within AO356_00230 at 41.916 kb on - strand, within AO356_00230 at 41.959 kb on - strand, within AO356_00230 at 42.153 kb on + strand at 42.153 kb on + strand at 42.153 kb on + strand at 42.177 kb on + strand at 42.234 kb on + strand at 42.490 kb on + strand, within AO356_00235 at 42.498 kb on + strand, within AO356_00235 at 42.498 kb on + strand, within AO356_00235 at 42.559 kb on + strand, within AO356_00235 at 42.559 kb on + strand, within AO356_00235 at 42.559 kb on + strand, within AO356_00235 at 42.560 kb on - strand, within AO356_00235 at 42.560 kb on - strand, within AO356_00235 at 42.565 kb on + strand, within AO356_00235 at 42.565 kb on + strand, within AO356_00235 at 42.628 kb on + strand, within AO356_00235 at 42.629 kb on - strand, within AO356_00235 at 42.676 kb on + strand at 42.676 kb on + strand at 42.676 kb on + strand at 42.677 kb on - strand at 42.774 kb on + strand at 42.774 kb on + strand at 42.774 kb on + strand at 42.774 kb on + strand at 42.774 kb on + strand at 42.775 kb on - strand at 42.820 kb on - strand at 42.845 kb on - strand at 43.057 kb on - strand, within AO356_00240 at 43.058 kb on + strand, within AO356_00240 at 43.058 kb on + strand, within AO356_00240 at 43.059 kb on - strand, within AO356_00240 at 43.059 kb on - strand, within AO356_00240 at 43.354 kb on - strand, within AO356_00240 at 43.420 kb on - strand, within AO356_00240 at 43.526 kb on - strand, within AO356_00240 at 43.526 kb on - strand, within AO356_00240
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 41,411 + AO356_00230 0.41 +0.7 41,473 + AO356_00230 0.46 +0.4 41,523 - AO356_00230 0.49 -0.7 41,544 + AO356_00230 0.50 +0.1 41,646 - AO356_00230 0.57 +0.5 41,777 + AO356_00230 0.66 -0.1 41,777 + AO356_00230 0.66 +1.0 41,778 - AO356_00230 0.66 -1.5 41,916 - AO356_00230 0.75 -0.8 41,959 - AO356_00230 0.78 +0.2 42,153 + +0.2 42,153 + +1.6 42,153 + +0.1 42,177 + -0.3 42,234 + -0.4 42,490 + AO356_00235 0.55 -0.0 42,498 + AO356_00235 0.57 -0.9 42,498 + AO356_00235 0.57 +0.1 42,559 + AO356_00235 0.71 -0.1 42,559 + AO356_00235 0.71 -1.9 42,559 + AO356_00235 0.71 +0.7 42,560 - AO356_00235 0.71 +0.2 42,560 - AO356_00235 0.71 +0.1 42,565 + AO356_00235 0.73 -0.7 42,565 + AO356_00235 0.73 +1.7 42,628 + AO356_00235 0.88 -2.5 42,629 - AO356_00235 0.88 -0.9 42,676 + +1.1 42,676 + +2.3 42,676 + -0.5 42,677 - +1.6 42,774 + +0.6 42,774 + -0.2 42,774 + -0.7 42,774 + -0.5 42,774 + -0.7 42,775 - -0.8 42,820 - +0.1 42,845 - +0.7 43,057 - AO356_00240 0.14 +1.1 43,058 + AO356_00240 0.14 -0.3 43,058 + AO356_00240 0.14 -0.5 43,059 - AO356_00240 0.14 +0.7 43,059 - AO356_00240 0.14 -0.1 43,354 - AO356_00240 0.25 +0.5 43,420 - AO356_00240 0.27 +1.6 43,526 - AO356_00240 0.31 +0.2 43,526 - AO356_00240 0.31 +1.7
Or see this region's nucleotide sequence