Strain Fitness in Shewanella loihica PV-4 around Shew_3819

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,546,515	+		Shew_3818	0.63	+0.3
4,546,523	-		Shew_3818	0.63	+0.0
4,546,534	+		Shew_3818	0.63	+0.2
4,546,543	+		Shew_3818	0.64	-0.1
4,546,593	-		Shew_3818	0.66	+0.0
4,546,814	-		Shew_3818	0.76	+0.4
4,546,827	+		Shew_3818	0.76	-0.8
4,546,835	-		Shew_3818	0.77	-0.3
4,546,978	+		Shew_3818	0.83	-0.3
4,547,342	-				-0.2
4,547,342	-				+0.2
4,547,507	+		Shew_3819	0.32	-0.1
4,547,709	-		Shew_3819	0.76	-0.5
4,547,867	-				+0.0
4,547,867	-				-0.1
4,547,867	-				-0.1
4,547,867	-				+0.0
4,547,873	+				-0.2
4,547,879	-				+0.0
4,547,879	-				+0.8
4,547,883	+				-0.1
4,547,883	+				-0.1
4,547,883	+				-1.6
4,547,883	+				+0.0
4,547,883	+				+0.6
4,547,891	-				-0.1
4,548,020	-				-0.1
4,548,030	-				-0.0
4,548,030	-				-0.0
4,548,171	+				-0.1
4,548,174	-				+0.0
4,548,176	+				-0.5
4,548,176	+				+0.1
4,548,176	+				+0.6
4,548,189	-				-0.2
4,548,199	+				+0.1
4,548,465	-		Shew_3820	0.65	+0.1
4,548,522	-		Shew_3820	0.78	-0.5
4,548,580	+				-0.4
4,548,621	-				-0.2
4,548,662	-				+0.3
4,548,664	+				+0.2
4,548,669	+				-0.2
4,548,669	+				+0.2
4,548,672	-				-0.0
4,548,677	-				-0.1
4,548,710	-				+0.1
4,548,811	+				+0.1