Strain Fitness in Shewanella loihica PV-4 around Shew_3248

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,884,105	-				+0.3
3,884,542	-				+0.0
3,884,888	+		Shew_3247	0.64	-0.5
3,885,097	-				+0.2
3,885,176	-		Shew_3248	0.18	+1.4
3,885,329	-		Shew_3248	0.43	+0.8
3,885,432	-		Shew_3248	0.60	-0.0
3,885,432	-		Shew_3248	0.60	+0.1
3,885,547	-		Shew_3248	0.79	+0.2
3,885,587	-		Shew_3248	0.85	+0.2
3,885,602	-		Shew_3248	0.88	+0.0
3,885,824	+				-0.0
3,885,832	-				-0.1
3,885,838	+				+0.1
3,885,839	-				-0.2
3,885,846	-				+0.3
3,885,925	-				-0.3
3,885,938	-				+0.1
3,886,067	+				-0.6
3,886,075	-		Shew_3249	0.10	+0.1
3,886,250	+		Shew_3249	0.21	-0.1
3,886,258	-		Shew_3249	0.21	+0.2
3,886,269	-		Shew_3249	0.22	+0.5
3,886,315	+		Shew_3249	0.25	-0.1
3,886,339	+		Shew_3249	0.26	+0.1