Experiment: MoLS4 with Casaminos 0.05%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0061 and DVUA0062 overlap by 4 nucleotides DVUA0062 and DVUA0063 are separated by 56 nucleotides
DVUA0061: DVUA0061 - membrane protein, putative (TIGR), at 75,835 to 77,187
DVUA0061
DVUA0062: DVUA0062 - conserved domain protein (TIGR), at 77,184 to 78,479
DVUA0062
DVUA0063: DVUA0063 - Orn/DAP/Arg family decarboxylase (TIGR), at 78,536 to 80,092
DVUA0063
Position (kb) 77
78
79 Strain fitness (log2 ratio) -2
-1
0
1 at 76.275 kb on - strand, within DVUA0061 at 76.295 kb on + strand, within DVUA0061 at 76.318 kb on - strand, within DVUA0061 at 76.322 kb on + strand, within DVUA0061 at 76.382 kb on - strand, within DVUA0061 at 76.423 kb on - strand, within DVUA0061 at 76.458 kb on - strand, within DVUA0061 at 76.554 kb on + strand, within DVUA0061 at 76.597 kb on - strand, within DVUA0061 at 76.607 kb on - strand, within DVUA0061 at 76.637 kb on + strand, within DVUA0061 at 76.637 kb on + strand, within DVUA0061 at 76.645 kb on - strand, within DVUA0061 at 76.661 kb on + strand, within DVUA0061 at 76.661 kb on + strand, within DVUA0061 at 76.661 kb on + strand, within DVUA0061 at 76.732 kb on + strand, within DVUA0061 at 76.740 kb on - strand, within DVUA0061 at 76.740 kb on - strand, within DVUA0061 at 76.740 kb on - strand, within DVUA0061 at 76.745 kb on - strand, within DVUA0061 at 76.844 kb on + strand, within DVUA0061 at 76.864 kb on - strand, within DVUA0061 at 76.887 kb on - strand, within DVUA0061 at 76.887 kb on - strand, within DVUA0061 at 76.887 kb on - strand, within DVUA0061 at 76.898 kb on + strand, within DVUA0061 at 76.898 kb on + strand, within DVUA0061 at 76.906 kb on - strand, within DVUA0061 at 76.906 kb on - strand, within DVUA0061 at 76.916 kb on - strand, within DVUA0061 at 76.932 kb on - strand, within DVUA0061 at 77.088 kb on - strand at 77.286 kb on - strand at 77.326 kb on + strand, within DVUA0062 at 77.326 kb on + strand, within DVUA0062 at 77.402 kb on - strand, within DVUA0062 at 77.409 kb on - strand, within DVUA0062 at 77.424 kb on - strand, within DVUA0062 at 77.494 kb on - strand, within DVUA0062 at 77.576 kb on + strand, within DVUA0062 at 77.576 kb on + strand, within DVUA0062 at 77.639 kb on + strand, within DVUA0062 at 77.752 kb on - strand, within DVUA0062 at 77.772 kb on + strand, within DVUA0062 at 77.813 kb on - strand, within DVUA0062 at 77.850 kb on - strand, within DVUA0062 at 77.884 kb on - strand, within DVUA0062 at 77.922 kb on + strand, within DVUA0062 at 78.033 kb on + strand, within DVUA0062 at 78.092 kb on - strand, within DVUA0062 at 78.097 kb on - strand, within DVUA0062 at 78.236 kb on + strand, within DVUA0062 at 78.241 kb on - strand, within DVUA0062 at 78.261 kb on - strand, within DVUA0062 at 78.311 kb on + strand, within DVUA0062 at 78.547 kb on - strand at 78.633 kb on + strand at 78.794 kb on - strand, within DVUA0063 at 78.808 kb on + strand, within DVUA0063 at 78.828 kb on + strand, within DVUA0063 at 78.848 kb on - strand, within DVUA0063 at 78.848 kb on - strand, within DVUA0063 at 78.865 kb on + strand, within DVUA0063 at 79.093 kb on - strand, within DVUA0063 at 79.138 kb on - strand, within DVUA0063 at 79.160 kb on + strand, within DVUA0063 at 79.289 kb on + strand, within DVUA0063 at 79.318 kb on - strand, within DVUA0063 at 79.324 kb on + strand, within DVUA0063 at 79.449 kb on + strand, within DVUA0063 at 79.449 kb on + strand, within DVUA0063 at 79.454 kb on + strand, within DVUA0063
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Casaminos 0.05% remove 76,275 - DVUA0061 0.33 -1.0 76,295 + DVUA0061 0.34 -0.1 76,318 - DVUA0061 0.36 +0.2 76,322 + DVUA0061 0.36 -0.1 76,382 - DVUA0061 0.40 -0.0 76,423 - DVUA0061 0.43 +1.4 76,458 - DVUA0061 0.46 -0.3 76,554 + DVUA0061 0.53 -2.6 76,597 - DVUA0061 0.56 -0.9 76,607 - DVUA0061 0.57 -0.2 76,637 + DVUA0061 0.59 +0.1 76,637 + DVUA0061 0.59 -0.6 76,645 - DVUA0061 0.60 +0.1 76,661 + DVUA0061 0.61 +0.4 76,661 + DVUA0061 0.61 +0.8 76,661 + DVUA0061 0.61 +1.5 76,732 + DVUA0061 0.66 +0.2 76,740 - DVUA0061 0.67 +0.1 76,740 - DVUA0061 0.67 +0.2 76,740 - DVUA0061 0.67 -1.5 76,745 - DVUA0061 0.67 +0.2 76,844 + DVUA0061 0.75 +0.1 76,864 - DVUA0061 0.76 -1.6 76,887 - DVUA0061 0.78 -0.8 76,887 - DVUA0061 0.78 -0.9 76,887 - DVUA0061 0.78 -0.5 76,898 + DVUA0061 0.79 +0.3 76,898 + DVUA0061 0.79 +1.4 76,906 - DVUA0061 0.79 -0.1 76,906 - DVUA0061 0.79 +0.9 76,916 - DVUA0061 0.80 -0.1 76,932 - DVUA0061 0.81 -0.0 77,088 - -0.4 77,286 - -1.2 77,326 + DVUA0062 0.11 -1.0 77,326 + DVUA0062 0.11 -0.1 77,402 - DVUA0062 0.17 -1.0 77,409 - DVUA0062 0.17 -0.6 77,424 - DVUA0062 0.19 -0.2 77,494 - DVUA0062 0.24 -0.9 77,576 + DVUA0062 0.30 -0.3 77,576 + DVUA0062 0.30 -0.2 77,639 + DVUA0062 0.35 +0.8 77,752 - DVUA0062 0.44 -0.2 77,772 + DVUA0062 0.45 -0.9 77,813 - DVUA0062 0.49 -0.5 77,850 - DVUA0062 0.51 +0.3 77,884 - DVUA0062 0.54 -0.7 77,922 + DVUA0062 0.57 -2.2 78,033 + DVUA0062 0.66 -1.4 78,092 - DVUA0062 0.70 -1.2 78,097 - DVUA0062 0.70 -0.3 78,236 + DVUA0062 0.81 -0.6 78,241 - DVUA0062 0.82 +0.4 78,261 - DVUA0062 0.83 -0.9 78,311 + DVUA0062 0.87 -1.5 78,547 - -0.0 78,633 + +0.0 78,794 - DVUA0063 0.17 -0.1 78,808 + DVUA0063 0.17 +0.8 78,828 + DVUA0063 0.19 +0.4 78,848 - DVUA0063 0.20 -0.9 78,848 - DVUA0063 0.20 -0.8 78,865 + DVUA0063 0.21 -0.8 79,093 - DVUA0063 0.36 -0.4 79,138 - DVUA0063 0.39 -1.6 79,160 + DVUA0063 0.40 -0.4 79,289 + DVUA0063 0.48 -0.1 79,318 - DVUA0063 0.50 +0.4 79,324 + DVUA0063 0.51 +0.4 79,449 + DVUA0063 0.59 +0.3 79,449 + DVUA0063 0.59 -0.5 79,454 + DVUA0063 0.59 +0.4
Or see this region's nucleotide sequence