Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS12375

Experiment: R2A with Chloride 250 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloride 250 mM
2,757,415	+				+0.1
2,757,415	+				-0.3
2,757,415	+				+1.2
2,757,415	+				-1.4
2,757,415	+				-0.9
2,757,415	+				-0.7
2,757,415	+				+1.7
2,757,415	+				-0.3
2,757,415	+				-0.3
2,757,415	+				+0.3
2,757,416	-				-1.4
2,757,416	-				-1.5
2,757,416	-				+0.6
2,757,416	-				-0.0
2,757,416	-				-1.5
2,757,416	-				-2.0
2,757,416	-				+1.2
2,757,416	-				+0.1
2,757,416	-				-0.7
2,757,416	-				+0.3
2,757,824	+				+0.0
2,757,824	+				+0.4
2,757,824	+				+0.4
2,757,824	+				-0.4
2,757,824	+				-0.9
2,757,824	+				+1.4
2,757,825	-				-0.2
2,757,825	-				-1.3
2,757,825	-				+0.1
2,757,825	-				+0.7
2,757,825	-				+0.8
2,757,825	-				-0.6
2,757,825	-				-0.6
2,757,825	-				-0.9
2,757,863	+				-1.9
2,757,863	+				+0.7
2,757,863	+				+0.5
2,757,863	+				-0.1
2,757,863	+				-0.6
2,757,863	+				+1.7
2,758,143	+		LRK54_RS12375	0.15	-0.6
2,758,143	+		LRK54_RS12375	0.15	-0.9
2,758,143	+		LRK54_RS12375	0.15	-1.5
2,758,143	+		LRK54_RS12375	0.15	-2.0
2,758,144	-		LRK54_RS12375	0.15	-1.2
2,758,144	-		LRK54_RS12375	0.15	-0.1
2,758,314	+		LRK54_RS12375	0.26	-0.1
2,758,314	+		LRK54_RS12375	0.26	-0.6
2,758,314	+		LRK54_RS12375	0.26	-1.5
2,758,314	+		LRK54_RS12375	0.26	+0.7
2,758,314	+		LRK54_RS12375	0.26	-2.2
2,758,314	+		LRK54_RS12375	0.26	+0.1
2,758,314	+		LRK54_RS12375	0.26	-1.4
2,758,315	-		LRK54_RS12375	0.26	+0.1
2,758,315	-		LRK54_RS12375	0.26	-0.2
2,758,315	-		LRK54_RS12375	0.26	+0.9
2,758,315	-		LRK54_RS12375	0.26	-0.2
2,758,315	-		LRK54_RS12375	0.26	+0.4
2,758,315	-		LRK54_RS12375	0.26	-0.3
2,758,315	-		LRK54_RS12375	0.26	-1.0
2,758,315	-		LRK54_RS12375	0.26	-0.3
2,758,315	-		LRK54_RS12375	0.26	-2.8
2,758,315	-		LRK54_RS12375	0.26	-0.6
2,758,315	-		LRK54_RS12375	0.26	+1.0
2,758,315	-		LRK54_RS12375	0.26	-1.8
2,758,329	+		LRK54_RS12375	0.27	-2.2
2,758,329	+		LRK54_RS12375	0.27	-1.4
2,758,329	+		LRK54_RS12375	0.27	-2.3
2,758,329	+		LRK54_RS12375	0.27	-0.9
2,758,329	+		LRK54_RS12375	0.27	-0.9
2,758,329	+		LRK54_RS12375	0.27	+0.6
2,758,329	+		LRK54_RS12375	0.27	-2.3
2,758,329	+		LRK54_RS12375	0.27	+1.7
2,758,329	+		LRK54_RS12375	0.27	-0.1
2,758,329	+		LRK54_RS12375	0.27	-0.1
2,758,329	+		LRK54_RS12375	0.27	-1.3
2,758,329	+		LRK54_RS12375	0.27	-1.8
2,758,329	+		LRK54_RS12375	0.27	-0.1
2,758,329	+		LRK54_RS12375	0.27	-2.0
2,758,329	+		LRK54_RS12375	0.27	-0.6
2,758,330	-		LRK54_RS12375	0.27	+0.7
2,758,330	-		LRK54_RS12375	0.27	-0.1
2,758,330	-		LRK54_RS12375	0.27	+1.5
2,758,330	-		LRK54_RS12375	0.27	-0.1
2,758,330	-		LRK54_RS12375	0.27	+0.2
2,758,330	-		LRK54_RS12375	0.27	-0.9
2,758,330	-		LRK54_RS12375	0.27	+0.0
2,758,330	-		LRK54_RS12375	0.27	-0.3
2,758,330	-		LRK54_RS12375	0.27	-0.5
2,758,428	+		LRK54_RS12375	0.34	+0.6
2,758,428	+		LRK54_RS12375	0.34	-0.4
2,758,428	+		LRK54_RS12375	0.34	-0.1
2,758,429	-		LRK54_RS12375	0.34	-0.8
2,758,429	-		LRK54_RS12375	0.34	+0.8
2,758,629	+		LRK54_RS12375	0.48	-1.7
2,758,629	+		LRK54_RS12375	0.48	+3.3
2,758,629	+		LRK54_RS12375	0.48	+0.5
2,758,629	+		LRK54_RS12375	0.48	-1.6
2,758,629	+		LRK54_RS12375	0.48	-1.7
2,758,629	+		LRK54_RS12375	0.48	-0.3
2,758,629	+		LRK54_RS12375	0.48	-0.7
2,758,630	-		LRK54_RS12375	0.48	-0.6
2,758,630	-		LRK54_RS12375	0.48	+0.7
2,758,630	-		LRK54_RS12375	0.48	-0.5
2,758,630	-		LRK54_RS12375	0.48	-0.6
2,758,630	-		LRK54_RS12375	0.48	+2.1
2,758,630	-		LRK54_RS12375	0.48	-0.5
2,758,630	-		LRK54_RS12375	0.48	+0.1
2,758,630	-		LRK54_RS12375	0.48	-2.2
2,758,630	-		LRK54_RS12375	0.48	+1.9
2,758,659	+		LRK54_RS12375	0.50	-0.5
2,758,659	+		LRK54_RS12375	0.50	-0.5
2,758,659	+		LRK54_RS12375	0.50	+0.1
2,758,659	+		LRK54_RS12375	0.50	-1.2
2,758,659	+		LRK54_RS12375	0.50	-0.6
2,758,659	+		LRK54_RS12375	0.50	-0.2
2,758,659	+		LRK54_RS12375	0.50	-1.7
2,758,659	+		LRK54_RS12375	0.50	-0.1
2,758,659	+		LRK54_RS12375	0.50	-1.7
2,758,659	+		LRK54_RS12375	0.50	-2.2
2,758,659	+		LRK54_RS12375	0.50	-0.1
2,758,660	-		LRK54_RS12375	0.50	-1.1
2,758,660	-		LRK54_RS12375	0.50	-0.0
2,758,660	-		LRK54_RS12375	0.50	-0.6
2,758,660	-		LRK54_RS12375	0.50	+1.2
2,758,660	-		LRK54_RS12375	0.50	-0.7
2,758,660	-		LRK54_RS12375	0.50	-1.7
2,758,660	-		LRK54_RS12375	0.50	-0.1
2,758,660	-		LRK54_RS12375	0.50	-1.5
2,758,660	-		LRK54_RS12375	0.50	-0.6
2,758,660	-		LRK54_RS12375	0.50	-0.7
2,758,660	-		LRK54_RS12375	0.50	-1.5
2,758,660	-		LRK54_RS12375	0.50	-0.9
2,758,660	-		LRK54_RS12375	0.50	-0.9
2,758,660	-		LRK54_RS12375	0.50	-1.5
2,758,812	+		LRK54_RS12375	0.60	-0.7
2,758,812	+		LRK54_RS12375	0.60	-0.3
2,758,812	+		LRK54_RS12375	0.60	-0.1
2,758,813	-		LRK54_RS12375	0.60	+0.1
2,758,813	-		LRK54_RS12375	0.60	-0.6
2,758,813	-		LRK54_RS12375	0.60	-0.6
2,758,813	-		LRK54_RS12375	0.60	-1.3
2,758,813	-		LRK54_RS12375	0.60	-0.4
2,758,813	-		LRK54_RS12375	0.60	-0.9
2,758,813	-		LRK54_RS12375	0.60	-0.0
2,758,813	-		LRK54_RS12375	0.60	-1.4
2,758,986	+		LRK54_RS12375	0.71	-0.3
2,758,986	+		LRK54_RS12375	0.71	-0.3
2,758,987	-		LRK54_RS12375	0.72	-2.0
2,758,987	-		LRK54_RS12375	0.72	-1.4
2,759,073	+		LRK54_RS12375	0.77	+0.1
2,759,073	+		LRK54_RS12375	0.77	-0.6
2,759,073	+		LRK54_RS12375	0.77	-0.8
2,759,073	+		LRK54_RS12375	0.77	-1.2
2,759,073	+		LRK54_RS12375	0.77	-0.5
2,759,073	+		LRK54_RS12375	0.77	-1.5
2,759,074	-		LRK54_RS12375	0.77	-0.8
2,759,074	-		LRK54_RS12375	0.77	-1.0
2,759,074	-		LRK54_RS12375	0.77	-0.9
2,759,074	-		LRK54_RS12375	0.77	-0.8
2,759,139	+		LRK54_RS12375	0.82	-0.2
2,759,337	+				-1.6
2,759,338	-				+1.6
2,759,338	-				+0.2
2,759,338	-				-1.4
2,759,453	+				-0.9
2,759,453	+				-1.5
2,759,453	+				-1.8
2,759,453	+				-0.5
2,759,453	+				-1.0
2,759,453	+				-0.2
2,759,453	+				-1.6
2,759,453	+				-0.9
2,759,454	-				+1.7
2,759,454	-				-0.7
2,759,490	+				-0.8
2,759,491	+				-1.9
2,759,491	+				-0.4
2,759,491	+				+0.5
2,759,491	+				-0.3
2,759,491	+				-1.1
2,759,491	+				-1.2
2,759,491	+				-0.2
2,759,491	+				-1.5
2,759,491	+				+0.5
2,759,491	+				-2.7
2,759,491	+				-0.4
2,759,507	+				+0.0