Experiment: Polymyxin B sulfate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3570 and Ga0059261_3571 are separated by 169 nucleotides Ga0059261_3571 and Ga0059261_3572 are separated by 12 nucleotides Ga0059261_3572 and Ga0059261_3573 are separated by 117 nucleotides Ga0059261_3573 and Ga0059261_3574 are separated by 1 nucleotides
Ga0059261_3570: Ga0059261_3570 - chaperone protein DnaK, at 3,696,685 to 3,698,598
_3570
Ga0059261_3571: Ga0059261_3571 - Uncharacterized protein conserved in bacteria, at 3,698,768 to 3,699,214
_3571
Ga0059261_3572: Ga0059261_3572 - YCII-related domain, at 3,699,227 to 3,699,640
_3572
Ga0059261_3573: Ga0059261_3573 - Bacterial PH domain, at 3,699,758 to 3,700,201
_3573
Ga0059261_3574: Ga0059261_3574 - hypothetical protein, at 3,700,203 to 3,700,697
_3574
Position (kb)
3698
3699
3700 Strain fitness (log2 ratio)
-2
-1
0
1 at 3698.728 kb on + strand at 3698.728 kb on + strand at 3698.728 kb on + strand at 3698.729 kb on - strand at 3698.729 kb on - strand at 3698.729 kb on - strand at 3698.729 kb on - strand at 3698.894 kb on + strand, within Ga0059261_3571 at 3699.212 kb on + strand at 3699.213 kb on - strand at 3699.213 kb on - strand at 3699.213 kb on - strand at 3699.213 kb on - strand at 3699.276 kb on + strand, within Ga0059261_3572 at 3699.276 kb on + strand, within Ga0059261_3572 at 3699.405 kb on + strand, within Ga0059261_3572 at 3699.406 kb on - strand, within Ga0059261_3572 at 3699.406 kb on - strand, within Ga0059261_3572 at 3699.406 kb on - strand, within Ga0059261_3572 at 3699.441 kb on + strand, within Ga0059261_3572 at 3699.441 kb on + strand, within Ga0059261_3572 at 3699.441 kb on + strand, within Ga0059261_3572 at 3699.441 kb on + strand, within Ga0059261_3572 at 3699.441 kb on + strand, within Ga0059261_3572 at 3699.442 kb on - strand, within Ga0059261_3572 at 3699.442 kb on - strand, within Ga0059261_3572 at 3699.442 kb on - strand, within Ga0059261_3572 at 3699.442 kb on - strand, within Ga0059261_3572 at 3699.442 kb on - strand, within Ga0059261_3572 at 3699.444 kb on + strand, within Ga0059261_3572 at 3699.444 kb on + strand, within Ga0059261_3572 at 3699.444 kb on + strand, within Ga0059261_3572 at 3699.445 kb on - strand, within Ga0059261_3572 at 3699.445 kb on - strand, within Ga0059261_3572 at 3699.445 kb on - strand, within Ga0059261_3572 at 3699.510 kb on + strand, within Ga0059261_3572 at 3699.510 kb on + strand, within Ga0059261_3572 at 3699.511 kb on - strand, within Ga0059261_3572 at 3699.511 kb on - strand, within Ga0059261_3572 at 3699.511 kb on - strand, within Ga0059261_3572 at 3699.640 kb on + strand at 3699.641 kb on - strand at 3699.641 kb on - strand at 3699.672 kb on + strand at 3699.672 kb on + strand at 3699.673 kb on - strand at 3699.725 kb on + strand at 3699.725 kb on + strand at 3699.725 kb on + strand at 3699.726 kb on - strand at 3699.726 kb on - strand at 3699.804 kb on + strand, within Ga0059261_3573 at 3699.805 kb on - strand, within Ga0059261_3573 at 3699.905 kb on + strand, within Ga0059261_3573 at 3699.905 kb on + strand, within Ga0059261_3573 at 3699.905 kb on + strand, within Ga0059261_3573 at 3699.905 kb on + strand, within Ga0059261_3573 at 3699.905 kb on + strand, within Ga0059261_3573 at 3699.905 kb on + strand, within Ga0059261_3573 at 3699.905 kb on + strand, within Ga0059261_3573 at 3699.905 kb on + strand, within Ga0059261_3573 at 3699.905 kb on + strand, within Ga0059261_3573 at 3699.905 kb on + strand, within Ga0059261_3573 at 3699.906 kb on - strand, within Ga0059261_3573 at 3699.906 kb on - strand, within Ga0059261_3573 at 3699.906 kb on - strand, within Ga0059261_3573 at 3699.906 kb on - strand, within Ga0059261_3573 at 3699.906 kb on - strand, within Ga0059261_3573 at 3699.906 kb on - strand, within Ga0059261_3573 at 3699.906 kb on - strand, within Ga0059261_3573 at 3699.906 kb on - strand, within Ga0059261_3573 at 3699.906 kb on - strand, within Ga0059261_3573 at 3699.906 kb on - strand, within Ga0059261_3573 at 3699.906 kb on - strand, within Ga0059261_3573 at 3699.906 kb on - strand, within Ga0059261_3573 at 3699.977 kb on + strand, within Ga0059261_3573 at 3700.028 kb on + strand, within Ga0059261_3573 at 3700.195 kb on + strand at 3700.195 kb on + strand at 3700.195 kb on + strand at 3700.195 kb on + strand at 3700.196 kb on - strand at 3700.196 kb on - strand at 3700.196 kb on - strand at 3700.196 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.1 mg/ml remove 3,698,728 + -2.6 3,698,728 + -1.3 3,698,728 + -1.0 3,698,729 - -0.1 3,698,729 - -1.2 3,698,729 - -0.9 3,698,729 - +0.5 3,698,894 + Ga0059261_3571 0.28 +0.7 3,699,212 + +0.1 3,699,213 - +0.1 3,699,213 - -0.7 3,699,213 - -0.0 3,699,213 - +0.0 3,699,276 + Ga0059261_3572 0.12 -1.3 3,699,276 + Ga0059261_3572 0.12 -0.4 3,699,405 + Ga0059261_3572 0.43 +0.1 3,699,406 - Ga0059261_3572 0.43 -0.7 3,699,406 - Ga0059261_3572 0.43 +0.7 3,699,406 - Ga0059261_3572 0.43 +0.5 3,699,441 + Ga0059261_3572 0.52 +0.5 3,699,441 + Ga0059261_3572 0.52 -0.1 3,699,441 + Ga0059261_3572 0.52 +0.1 3,699,441 + Ga0059261_3572 0.52 +0.3 3,699,441 + Ga0059261_3572 0.52 +0.2 3,699,442 - Ga0059261_3572 0.52 -1.7 3,699,442 - Ga0059261_3572 0.52 +0.1 3,699,442 - Ga0059261_3572 0.52 -0.1 3,699,442 - Ga0059261_3572 0.52 -1.4 3,699,442 - Ga0059261_3572 0.52 +0.1 3,699,444 + Ga0059261_3572 0.52 +0.4 3,699,444 + Ga0059261_3572 0.52 +0.8 3,699,444 + Ga0059261_3572 0.52 -0.8 3,699,445 - Ga0059261_3572 0.53 -1.1 3,699,445 - Ga0059261_3572 0.53 +0.3 3,699,445 - Ga0059261_3572 0.53 +0.8 3,699,510 + Ga0059261_3572 0.68 +0.4 3,699,510 + Ga0059261_3572 0.68 +0.2 3,699,511 - Ga0059261_3572 0.69 -0.7 3,699,511 - Ga0059261_3572 0.69 -0.6 3,699,511 - Ga0059261_3572 0.69 -0.8 3,699,640 + +0.5 3,699,641 - -0.8 3,699,641 - -0.7 3,699,672 + +0.1 3,699,672 + +0.3 3,699,673 - +0.8 3,699,725 + -0.2 3,699,725 + +0.6 3,699,725 + +0.7 3,699,726 - -0.5 3,699,726 - +1.3 3,699,804 + Ga0059261_3573 0.10 -1.9 3,699,805 - Ga0059261_3573 0.11 -0.7 3,699,905 + Ga0059261_3573 0.33 -0.5 3,699,905 + Ga0059261_3573 0.33 -0.3 3,699,905 + Ga0059261_3573 0.33 -0.7 3,699,905 + Ga0059261_3573 0.33 +0.3 3,699,905 + Ga0059261_3573 0.33 -0.0 3,699,905 + Ga0059261_3573 0.33 +0.4 3,699,905 + Ga0059261_3573 0.33 -0.0 3,699,905 + Ga0059261_3573 0.33 -2.0 3,699,905 + Ga0059261_3573 0.33 -0.3 3,699,905 + Ga0059261_3573 0.33 -0.8 3,699,906 - Ga0059261_3573 0.33 +0.8 3,699,906 - Ga0059261_3573 0.33 -0.2 3,699,906 - Ga0059261_3573 0.33 +0.4 3,699,906 - Ga0059261_3573 0.33 +0.2 3,699,906 - Ga0059261_3573 0.33 -0.8 3,699,906 - Ga0059261_3573 0.33 -0.0 3,699,906 - Ga0059261_3573 0.33 +0.1 3,699,906 - Ga0059261_3573 0.33 +0.6 3,699,906 - Ga0059261_3573 0.33 +0.0 3,699,906 - Ga0059261_3573 0.33 -0.2 3,699,906 - Ga0059261_3573 0.33 +0.2 3,699,906 - Ga0059261_3573 0.33 -0.9 3,699,977 + Ga0059261_3573 0.49 +0.4 3,700,028 + Ga0059261_3573 0.61 -1.3 3,700,195 + -0.5 3,700,195 + -0.0 3,700,195 + -0.7 3,700,195 + -0.2 3,700,196 - +0.2 3,700,196 - -0.7 3,700,196 - +0.3 3,700,196 - -0.2
Or see this region's nucleotide sequence