Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01046

Experiment: PYE with Chlorite 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chlorite 0.5 mM
1,140,126	+				+0.5
1,140,148	+				-1.6
1,140,149	-				-0.5
1,140,162	+				-1.3
1,140,169	-				-1.5
1,140,170	-				-3.0
1,140,190	-		CCNA_01044	0.10	-0.5
1,140,218	-		CCNA_01044	0.15	-1.9
1,140,231	-		CCNA_01044	0.17	+1.5
1,140,240	+		CCNA_01044	0.18	+0.4
1,140,271	-		CCNA_01044	0.23	-1.1
1,140,317	-		CCNA_01044	0.30	-0.1
1,140,339	+		CCNA_01044	0.34	+1.2
1,140,339	+		CCNA_01044	0.34	-2.9
1,140,339	+		CCNA_01044	0.34	-1.8
1,140,339	+		CCNA_01044	0.34	+0.2
1,140,339	+		CCNA_01044	0.34	-0.1
1,140,339	+		CCNA_01044	0.34	-0.2
1,140,339	+		CCNA_01044	0.34	-1.1
1,140,339	+		CCNA_01044	0.34	-0.3
1,140,347	-		CCNA_01044	0.35	-1.3
1,140,347	-		CCNA_01044	0.35	-0.8
1,140,362	-		CCNA_01044	0.38	-2.7
1,140,405	+		CCNA_01044	0.44	-0.2
1,140,405	+		CCNA_01044	0.44	-0.5
1,140,410	+		CCNA_01044	0.45	-0.8
1,140,410	+		CCNA_01044	0.45	+0.6
1,140,410	+		CCNA_01044	0.45	-1.1
1,140,415	+		CCNA_01044	0.46	-0.5
1,140,415	+		CCNA_01044	0.46	-0.8
1,140,423	-		CCNA_01044	0.47	+1.2
1,140,428	-		CCNA_01044	0.48	-1.7
1,140,446	+		CCNA_01044	0.51	+1.5
1,140,448	+		CCNA_01044	0.51	-0.5
1,140,471	-		CCNA_01044	0.55	-2.1
1,140,471	-		CCNA_01044	0.55	-0.3
1,140,514	+		CCNA_01044	0.62	-0.6
1,140,534	+		CCNA_01044	0.65	+2.2
1,140,534	+		CCNA_01044	0.65	+2.2
1,140,534	+		CCNA_01044	0.65	+1.7
1,140,534	+		CCNA_01044	0.65	+1.7
1,140,534	+		CCNA_01044	0.65	+1.8
1,140,534	+		CCNA_01044	0.65	+1.8
1,140,534	+		CCNA_01044	0.65	+1.4
1,140,534	+		CCNA_01044	0.65	+1.9
1,140,542	-		CCNA_01044	0.66	+0.5
1,140,542	-		CCNA_01044	0.66	-1.3
1,140,542	-		CCNA_01044	0.66	-2.3
1,140,549	-		CCNA_01044	0.67	-0.7
1,140,582	+		CCNA_01044	0.72	+1.0
1,140,590	-		CCNA_01044	0.74	+1.1
1,140,590	-		CCNA_01044	0.74	-1.3
1,140,590	-		CCNA_01044	0.74	-0.5
1,140,590	-		CCNA_01044	0.74	-0.9
1,140,597	-		CCNA_01044	0.75	-0.3
1,140,633	+		CCNA_01044	0.80	+1.3
1,140,680	+		CCNA_01044	0.88	+0.8
1,140,680	+		CCNA_01044	0.88	-1.3
1,140,714	+				+0.2
1,140,741	+				-0.2
1,140,749	-				-0.4
1,140,750	-				+0.9
1,140,776	-				-0.1
1,140,787	+		CCNA_01045	0.11	-1.3
1,140,787	+		CCNA_01045	0.11	-0.7
1,140,865	+		CCNA_01045	0.34	-1.1
1,140,900	+		CCNA_01045	0.44	-0.1
1,140,900	+		CCNA_01045	0.44	-0.5
1,140,900	+		CCNA_01045	0.44	+1.6
1,140,900	+		CCNA_01045	0.44	-0.5
1,140,903	-		CCNA_01045	0.45	+1.2
1,140,908	-		CCNA_01045	0.46	-1.1
1,140,908	-		CCNA_01045	0.46	-0.1
1,140,908	-		CCNA_01045	0.46	-0.0
1,140,936	-		CCNA_01045	0.54	-0.2
1,140,936	-		CCNA_01045	0.54	+0.6
1,140,956	-		CCNA_01045	0.60	+0.8
1,140,973	-		CCNA_01045	0.65	+0.3
1,141,006	+		CCNA_01045	0.74	-0.5
1,141,014	-		CCNA_01045	0.77	+0.4
1,141,027	-		CCNA_01045	0.81	+0.3
1,141,052	+		CCNA_01045	0.88	-1.5
1,141,065	-				+1.8
1,141,066	-				+0.7
1,141,086	+				-1.7
1,141,089	-				+1.5
1,141,094	-				-0.0
1,141,096	+				-2.7
1,141,123	+				-3.2
1,141,131	-				-0.3
1,141,191	-		CCNA_01046	0.15	-0.5
1,141,191	-		CCNA_01046	0.15	+0.5
1,141,199	+		CCNA_01046	0.16	+0.5
1,141,209	-		CCNA_01046	0.18	-0.6
1,141,264	-		CCNA_01046	0.26	-1.0
1,141,277	+		CCNA_01046	0.28	-2.7
1,141,285	-		CCNA_01046	0.29	-0.1
1,141,285	-		CCNA_01046	0.29	-1.0
1,141,285	-		CCNA_01046	0.29	-0.6
1,141,285	-		CCNA_01046	0.29	-1.0
1,141,354	-		CCNA_01046	0.40	-0.7
1,141,372	-		CCNA_01046	0.43	-2.9
1,141,380	+		CCNA_01046	0.44	-0.8
1,141,388	-		CCNA_01046	0.45	-2.8
1,141,388	-		CCNA_01046	0.45	-0.4
1,141,400	+		CCNA_01046	0.47	+1.0
1,141,420	+		CCNA_01046	0.50	-0.8
1,141,421	-		CCNA_01046	0.50	-0.4
1,141,421	-		CCNA_01046	0.50	-0.6
1,141,428	-		CCNA_01046	0.51	-0.5
1,141,428	-		CCNA_01046	0.51	+0.4
1,141,441	-		CCNA_01046	0.53	-0.5
1,141,454	+		CCNA_01046	0.55	-1.1
1,141,462	-		CCNA_01046	0.56	+1.5
1,141,462	-		CCNA_01046	0.56	-0.8
1,141,467	-		CCNA_01046	0.57	-0.7
1,141,478	+		CCNA_01046	0.59	-2.2
1,141,478	+		CCNA_01046	0.59	-1.1
1,141,478	+		CCNA_01046	0.59	-1.8
1,141,486	-		CCNA_01046	0.60	-1.8
1,141,486	-		CCNA_01046	0.60	-1.2
1,141,493	-		CCNA_01046	0.61	-0.9
1,141,508	-		CCNA_01046	0.63	-0.6
1,141,508	-		CCNA_01046	0.63	-1.2
1,141,556	+		CCNA_01046	0.71	-2.1
1,141,577	+		CCNA_01046	0.74	-0.9
1,141,578	-		CCNA_01046	0.74	-0.3
1,141,585	-		CCNA_01046	0.75	+2.5
1,141,609	+		CCNA_01046	0.79	-1.3
1,141,617	+		CCNA_01046	0.80	-1.7
1,141,638	+		CCNA_01046	0.83	-1.7
1,141,638	+		CCNA_01046	0.83	-0.6
1,141,646	-		CCNA_01046	0.85	-3.1
1,141,659	-				+0.9
1,141,660	+		CCNA_01046	0.87	-0.4
1,141,668	-		CCNA_01046	0.88	-0.9
1,141,668	-		CCNA_01046	0.88	-0.8
1,141,693	+				-2.1
1,141,693	+				-1.5
1,141,701	-				-0.5
1,141,701	-				-0.9
1,141,701	-				-0.7
1,141,701	-				-1.0
1,141,720	+				-0.2
1,141,727	+				-0.8
1,141,735	-				-0.8
1,141,782	+				-1.4
1,142,008	-				-1.9
1,142,193	-				-0.5
1,142,245	-				+0.5
1,142,271	+				+0.2
1,142,271	+				+0.4
1,142,271	+				-0.5
1,142,271	-				-0.1
1,142,279	-				-1.9
1,142,337	-				-1.1
1,142,383	+				-2.4
1,142,398	-				-0.5
1,142,425	-				-0.5
1,142,480	+				+1.1
1,142,488	-				-1.1
1,142,524	+		CCNA_01047	0.11	-1.9
1,142,529	+		CCNA_01047	0.11	-0.5
1,142,537	-		CCNA_01047	0.11	-1.1
1,142,537	-		CCNA_01047	0.11	-1.5
1,142,537	-		CCNA_01047	0.11	-0.5
1,142,542	-		CCNA_01047	0.11	-1.8
1,142,543	-		CCNA_01047	0.11	-0.8
1,142,547	-		CCNA_01047	0.11	-1.6
1,142,548	-		CCNA_01047	0.11	+0.3
1,142,548	-		CCNA_01047	0.11	+0.7
1,142,553	+		CCNA_01047	0.12	-1.1
1,142,553	+		CCNA_01047	0.12	+1.1
1,142,553	+		CCNA_01047	0.12	-1.1
1,142,561	-		CCNA_01047	0.12	+0.5
1,142,561	-		CCNA_01047	0.12	-0.6
1,142,578	+		CCNA_01047	0.13	-1.3
1,142,627	-		CCNA_01047	0.14	-0.5
1,142,669	+		CCNA_01047	0.16	-0.9
1,142,670	+		CCNA_01047	0.16	-0.8
1,142,740	-		CCNA_01047	0.19	-0.9
1,142,740	-		CCNA_01047	0.19	+0.5