Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30170 and AO356_30175 overlap by 4 nucleotides AO356_30175 and AO356_30180 are separated by 168 nucleotides
AO356_30170: AO356_30170 - cytochrome B, at 7,042,141 to 7,042,719
_30170
AO356_30175: AO356_30175 - caspase, at 7,042,716 to 7,043,798
_30175
AO356_30180: AO356_30180 - hypothetical protein, at 7,043,967 to 7,044,176
_30180
Position (kb)
7042
7043
7044 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 7041.738 kb on + strand at 7041.739 kb on - strand at 7041.779 kb on + strand at 7041.782 kb on - strand at 7041.787 kb on - strand at 7041.821 kb on - strand at 7041.821 kb on - strand at 7041.821 kb on - strand at 7041.821 kb on - strand at 7041.978 kb on + strand at 7041.978 kb on + strand at 7041.979 kb on - strand at 7042.081 kb on - strand at 7042.081 kb on - strand at 7042.081 kb on - strand at 7042.299 kb on + strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.439 kb on + strand, within AO356_30170 at 7042.439 kb on + strand, within AO356_30170 at 7042.440 kb on - strand, within AO356_30170 at 7042.440 kb on - strand, within AO356_30170 at 7042.598 kb on + strand, within AO356_30170 at 7042.598 kb on + strand, within AO356_30170 at 7042.599 kb on - strand, within AO356_30170 at 7042.768 kb on + strand at 7042.798 kb on + strand at 7043.127 kb on + strand, within AO356_30175 at 7043.142 kb on - strand, within AO356_30175 at 7043.515 kb on + strand, within AO356_30175 at 7043.516 kb on - strand, within AO356_30175 at 7043.516 kb on - strand, within AO356_30175 at 7043.771 kb on + strand at 7043.772 kb on - strand at 7043.772 kb on - strand at 7043.845 kb on - strand at 7043.895 kb on + strand at 7043.895 kb on + strand at 7043.896 kb on - strand at 7043.896 kb on - strand at 7043.917 kb on + strand at 7043.917 kb on + strand at 7043.918 kb on - strand at 7043.950 kb on + strand at 7043.950 kb on + strand at 7043.950 kb on + strand at 7043.950 kb on + strand at 7043.951 kb on - strand at 7043.969 kb on - strand at 7043.969 kb on - strand at 7044.106 kb on + strand, within AO356_30180 at 7044.106 kb on + strand, within AO356_30180 at 7044.107 kb on - strand, within AO356_30180 at 7044.121 kb on + strand, within AO356_30180 at 7044.122 kb on - strand, within AO356_30180 at 7044.146 kb on + strand, within AO356_30180 at 7044.146 kb on + strand, within AO356_30180 at 7044.147 kb on - strand, within AO356_30180 at 7044.147 kb on - strand, within AO356_30180 at 7044.147 kb on - strand, within AO356_30180 at 7044.147 kb on - strand, within AO356_30180 at 7044.148 kb on + strand, within AO356_30180 at 7044.148 kb on + strand, within AO356_30180 at 7044.149 kb on - strand, within AO356_30180 at 7044.149 kb on - strand, within AO356_30180 at 7044.158 kb on + strand at 7044.200 kb on + strand at 7044.208 kb on + strand at 7044.209 kb on - strand at 7044.346 kb on - strand at 7044.346 kb on - strand at 7044.369 kb on - strand at 7044.407 kb on + strand at 7044.408 kb on - strand at 7044.408 kb on - strand at 7044.408 kb on - strand at 7044.408 kb on - strand at 7044.409 kb on + strand at 7044.409 kb on + strand at 7044.409 kb on + strand at 7044.410 kb on - strand at 7044.425 kb on - strand at 7044.476 kb on + strand at 7044.548 kb on + strand at 7044.571 kb on + strand at 7044.571 kb on + strand at 7044.662 kb on + strand at 7044.662 kb on + strand at 7044.662 kb on + strand at 7044.663 kb on - strand at 7044.710 kb on - strand at 7044.731 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 7,041,738 + +0.4 7,041,739 - -1.2 7,041,779 + -0.3 7,041,782 - +0.3 7,041,787 - +1.2 7,041,821 - -1.2 7,041,821 - -0.3 7,041,821 - +0.1 7,041,821 - +0.8 7,041,978 + +0.1 7,041,978 + -0.4 7,041,979 - +0.2 7,042,081 - -0.3 7,042,081 - -0.1 7,042,081 - +0.6 7,042,299 + AO356_30170 0.27 -1.0 7,042,300 - AO356_30170 0.27 -0.8 7,042,300 - AO356_30170 0.27 +0.5 7,042,300 - AO356_30170 0.27 +0.1 7,042,300 - AO356_30170 0.27 +0.2 7,042,300 - AO356_30170 0.27 -0.9 7,042,439 + AO356_30170 0.51 -0.1 7,042,439 + AO356_30170 0.51 +0.5 7,042,440 - AO356_30170 0.52 -1.1 7,042,440 - AO356_30170 0.52 -0.5 7,042,598 + AO356_30170 0.79 -0.2 7,042,598 + AO356_30170 0.79 +0.2 7,042,599 - AO356_30170 0.79 -1.0 7,042,768 + -1.2 7,042,798 + -0.3 7,043,127 + AO356_30175 0.38 -0.1 7,043,142 - AO356_30175 0.39 +0.1 7,043,515 + AO356_30175 0.74 +0.1 7,043,516 - AO356_30175 0.74 -1.0 7,043,516 - AO356_30175 0.74 +0.1 7,043,771 + -0.2 7,043,772 - +0.3 7,043,772 - -1.4 7,043,845 - +0.3 7,043,895 + +0.1 7,043,895 + +0.3 7,043,896 - +0.6 7,043,896 - -0.3 7,043,917 + +0.8 7,043,917 + -0.2 7,043,918 - +0.7 7,043,950 + -0.6 7,043,950 + +0.6 7,043,950 + +0.4 7,043,950 + -0.2 7,043,951 - -1.4 7,043,969 - +0.3 7,043,969 - +0.2 7,044,106 + AO356_30180 0.66 -0.3 7,044,106 + AO356_30180 0.66 -0.4 7,044,107 - AO356_30180 0.67 +0.8 7,044,121 + AO356_30180 0.73 +0.6 7,044,122 - AO356_30180 0.74 +0.5 7,044,146 + AO356_30180 0.85 +0.6 7,044,146 + AO356_30180 0.85 -0.9 7,044,147 - AO356_30180 0.86 +1.2 7,044,147 - AO356_30180 0.86 -1.1 7,044,147 - AO356_30180 0.86 -0.7 7,044,147 - AO356_30180 0.86 -1.0 7,044,148 + AO356_30180 0.86 -0.2 7,044,148 + AO356_30180 0.86 +0.1 7,044,149 - AO356_30180 0.87 +0.7 7,044,149 - AO356_30180 0.87 +0.4 7,044,158 + +0.2 7,044,200 + -0.5 7,044,208 + -0.2 7,044,209 - +0.3 7,044,346 - +2.1 7,044,346 - +0.4 7,044,369 - -0.2 7,044,407 + +0.2 7,044,408 - +0.3 7,044,408 - -2.6 7,044,408 - -1.9 7,044,408 - +0.3 7,044,409 + -0.4 7,044,409 + -0.6 7,044,409 + +0.6 7,044,410 - +0.3 7,044,425 - +0.4 7,044,476 + +0.3 7,044,548 + -0.3 7,044,571 + +0.6 7,044,571 + +0.1 7,044,662 + -0.0 7,044,662 + -0.9 7,044,662 + -1.5 7,044,663 - -0.3 7,044,710 - +0.3 7,044,731 - +0.3
Or see this region's nucleotide sequence