Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30085 and AO356_30090 are separated by 281 nucleotides AO356_30090 and AO356_30095 are separated by 239 nucleotides
AO356_30085: AO356_30085 - glutamine synthetase, at 7,021,470 to 7,022,804
_30085
AO356_30090: AO356_30090 - XRE family transcriptional regulator, at 7,023,086 to 7,023,685
_30090
AO356_30095: AO356_30095 - formyltetrahydrofolate deformylase, at 7,023,925 to 7,024,791
_30095
Position (kb)
7023
7024 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 7022.215 kb on + strand, within AO356_30085 at 7022.216 kb on - strand, within AO356_30085 at 7022.221 kb on + strand, within AO356_30085 at 7022.221 kb on + strand, within AO356_30085 at 7022.221 kb on + strand, within AO356_30085 at 7022.221 kb on + strand, within AO356_30085 at 7022.221 kb on + strand, within AO356_30085 at 7022.222 kb on - strand, within AO356_30085 at 7022.222 kb on - strand, within AO356_30085 at 7022.222 kb on - strand, within AO356_30085 at 7022.222 kb on - strand, within AO356_30085 at 7022.339 kb on + strand, within AO356_30085 at 7022.339 kb on + strand, within AO356_30085 at 7022.339 kb on + strand, within AO356_30085 at 7022.341 kb on + strand, within AO356_30085 at 7022.341 kb on + strand, within AO356_30085 at 7022.342 kb on - strand, within AO356_30085 at 7022.342 kb on - strand, within AO356_30085 at 7022.347 kb on + strand, within AO356_30085 at 7022.475 kb on + strand, within AO356_30085 at 7022.476 kb on - strand, within AO356_30085 at 7022.476 kb on - strand, within AO356_30085 at 7022.476 kb on - strand, within AO356_30085 at 7022.476 kb on - strand, within AO356_30085 at 7022.476 kb on - strand, within AO356_30085 at 7022.507 kb on - strand, within AO356_30085 at 7022.751 kb on + strand at 7022.751 kb on + strand at 7022.752 kb on - strand at 7022.752 kb on - strand at 7022.755 kb on + strand at 7022.756 kb on - strand at 7022.756 kb on - strand at 7022.879 kb on + strand at 7022.959 kb on + strand at 7022.959 kb on + strand at 7022.959 kb on + strand at 7022.960 kb on - strand at 7022.960 kb on - strand at 7022.961 kb on + strand at 7022.961 kb on + strand at 7022.961 kb on + strand at 7022.962 kb on - strand at 7022.962 kb on - strand at 7022.963 kb on + strand at 7022.964 kb on - strand at 7023.085 kb on + strand at 7023.085 kb on + strand at 7023.085 kb on + strand at 7023.085 kb on + strand at 7023.085 kb on + strand at 7023.085 kb on + strand at 7023.085 kb on + strand at 7023.085 kb on + strand at 7023.086 kb on - strand at 7023.086 kb on - strand at 7023.086 kb on - strand at 7023.125 kb on + strand at 7023.126 kb on - strand at 7023.175 kb on - strand, within AO356_30090 at 7023.397 kb on + strand, within AO356_30090 at 7023.397 kb on + strand, within AO356_30090 at 7023.397 kb on + strand, within AO356_30090 at 7023.398 kb on - strand, within AO356_30090 at 7023.398 kb on - strand, within AO356_30090 at 7023.398 kb on - strand, within AO356_30090 at 7023.401 kb on + strand, within AO356_30090 at 7023.401 kb on + strand, within AO356_30090 at 7023.401 kb on + strand, within AO356_30090 at 7023.401 kb on + strand, within AO356_30090 at 7023.402 kb on - strand, within AO356_30090 at 7023.402 kb on - strand, within AO356_30090 at 7023.402 kb on - strand, within AO356_30090 at 7023.449 kb on + strand, within AO356_30090 at 7023.449 kb on + strand, within AO356_30090 at 7023.449 kb on + strand, within AO356_30090 at 7023.449 kb on + strand, within AO356_30090 at 7023.450 kb on - strand, within AO356_30090 at 7023.450 kb on - strand, within AO356_30090 at 7023.450 kb on - strand, within AO356_30090 at 7023.542 kb on + strand, within AO356_30090 at 7023.683 kb on + strand at 7023.684 kb on - strand at 7023.802 kb on - strand at 7023.803 kb on + strand at 7023.804 kb on - strand at 7023.804 kb on - strand at 7023.804 kb on - strand at 7023.887 kb on + strand at 7024.004 kb on - strand at 7024.024 kb on + strand, within AO356_30095 at 7024.025 kb on - strand, within AO356_30095 at 7024.355 kb on - strand, within AO356_30095 at 7024.451 kb on - strand, within AO356_30095 at 7024.451 kb on - strand, within AO356_30095 at 7024.451 kb on - strand, within AO356_30095 at 7024.601 kb on - strand, within AO356_30095 at 7024.601 kb on - strand, within AO356_30095 at 7024.666 kb on + strand, within AO356_30095 at 7024.667 kb on - strand, within AO356_30095 at 7024.667 kb on - strand, within AO356_30095 at 7024.667 kb on - strand, within AO356_30095 at 7024.667 kb on - strand, within AO356_30095
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 7,022,215 + AO356_30085 0.56 -0.1 7,022,216 - AO356_30085 0.56 -0.2 7,022,221 + AO356_30085 0.56 +0.2 7,022,221 + AO356_30085 0.56 -0.5 7,022,221 + AO356_30085 0.56 +0.4 7,022,221 + AO356_30085 0.56 +0.3 7,022,221 + AO356_30085 0.56 -0.6 7,022,222 - AO356_30085 0.56 -0.3 7,022,222 - AO356_30085 0.56 -1.2 7,022,222 - AO356_30085 0.56 -0.8 7,022,222 - AO356_30085 0.56 +0.3 7,022,339 + AO356_30085 0.65 +0.8 7,022,339 + AO356_30085 0.65 +0.5 7,022,339 + AO356_30085 0.65 -0.7 7,022,341 + AO356_30085 0.65 -1.0 7,022,341 + AO356_30085 0.65 -0.0 7,022,342 - AO356_30085 0.65 -1.4 7,022,342 - AO356_30085 0.65 +0.2 7,022,347 + AO356_30085 0.66 -0.9 7,022,475 + AO356_30085 0.75 +0.4 7,022,476 - AO356_30085 0.75 +0.1 7,022,476 - AO356_30085 0.75 -0.8 7,022,476 - AO356_30085 0.75 -0.7 7,022,476 - AO356_30085 0.75 -0.1 7,022,476 - AO356_30085 0.75 +0.6 7,022,507 - AO356_30085 0.78 +0.2 7,022,751 + +0.5 7,022,751 + +1.2 7,022,752 - +0.2 7,022,752 - -0.4 7,022,755 + -0.9 7,022,756 - -1.3 7,022,756 - -0.3 7,022,879 + -0.4 7,022,959 + -0.5 7,022,959 + -0.2 7,022,959 + -0.0 7,022,960 - -0.6 7,022,960 - +1.0 7,022,961 + +0.2 7,022,961 + -0.2 7,022,961 + +0.1 7,022,962 - +0.3 7,022,962 - +0.7 7,022,963 + -0.7 7,022,964 - +0.3 7,023,085 + +0.1 7,023,085 + +0.3 7,023,085 + -1.0 7,023,085 + -1.4 7,023,085 + -0.9 7,023,085 + +1.6 7,023,085 + +0.9 7,023,085 + -0.1 7,023,086 - +1.1 7,023,086 - -0.1 7,023,086 - -0.1 7,023,125 + +1.5 7,023,126 - -0.2 7,023,175 - AO356_30090 0.15 +0.3 7,023,397 + AO356_30090 0.52 +0.0 7,023,397 + AO356_30090 0.52 +0.4 7,023,397 + AO356_30090 0.52 -1.3 7,023,398 - AO356_30090 0.52 +1.4 7,023,398 - AO356_30090 0.52 +0.6 7,023,398 - AO356_30090 0.52 -0.0 7,023,401 + AO356_30090 0.53 -0.2 7,023,401 + AO356_30090 0.53 +0.1 7,023,401 + AO356_30090 0.53 +0.1 7,023,401 + AO356_30090 0.53 +0.3 7,023,402 - AO356_30090 0.53 -1.0 7,023,402 - AO356_30090 0.53 -0.4 7,023,402 - AO356_30090 0.53 -0.6 7,023,449 + AO356_30090 0.60 -0.7 7,023,449 + AO356_30090 0.60 +0.3 7,023,449 + AO356_30090 0.60 +0.4 7,023,449 + AO356_30090 0.60 +0.3 7,023,450 - AO356_30090 0.61 +1.0 7,023,450 - AO356_30090 0.61 -0.0 7,023,450 - AO356_30090 0.61 +0.5 7,023,542 + AO356_30090 0.76 -0.5 7,023,683 + +0.8 7,023,684 - +0.3 7,023,802 - +0.3 7,023,803 + -0.5 7,023,804 - +0.3 7,023,804 - -0.2 7,023,804 - +0.1 7,023,887 + -1.5 7,024,004 - +2.0 7,024,024 + AO356_30095 0.11 -0.3 7,024,025 - AO356_30095 0.12 -0.7 7,024,355 - AO356_30095 0.50 -1.2 7,024,451 - AO356_30095 0.61 -0.4 7,024,451 - AO356_30095 0.61 +0.2 7,024,451 - AO356_30095 0.61 +0.7 7,024,601 - AO356_30095 0.78 -2.3 7,024,601 - AO356_30095 0.78 -0.6 7,024,666 + AO356_30095 0.85 -0.0 7,024,667 - AO356_30095 0.86 -0.1 7,024,667 - AO356_30095 0.86 -0.2 7,024,667 - AO356_30095 0.86 -2.2 7,024,667 - AO356_30095 0.86 -1.2
Or see this region's nucleotide sequence