Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29780 and AO356_29785 overlap by 4 nucleotides AO356_29785 and AO356_29790 are separated by 2 nucleotides AO356_29790 and AO356_29795 are separated by 29 nucleotides
AO356_29780: AO356_29780 - sarcosine oxidase subunit beta, at 6,925,397 to 6,926,563
_29780
AO356_29785: AO356_29785 - ABC transporter permease, at 6,926,560 to 6,927,273
_29785
AO356_29790: AO356_29790 - ABC transporter permease, at 6,927,276 to 6,927,968
_29790
AO356_29795: AO356_29795 - amino acid transporter, at 6,927,998 to 6,928,804
_29795
Position (kb)
6927
6928 Strain fitness (log2 ratio)
-2
-1
0
1 at 6926.363 kb on + strand, within AO356_29780 at 6926.363 kb on + strand, within AO356_29780 at 6926.364 kb on - strand, within AO356_29780 at 6926.364 kb on - strand, within AO356_29780 at 6926.433 kb on + strand, within AO356_29780 at 6926.544 kb on + strand at 6926.545 kb on - strand at 6926.545 kb on - strand at 6926.748 kb on + strand, within AO356_29785 at 6926.789 kb on - strand, within AO356_29785 at 6926.901 kb on - strand, within AO356_29785 at 6926.967 kb on - strand, within AO356_29785 at 6926.967 kb on - strand, within AO356_29785 at 6926.989 kb on - strand, within AO356_29785 at 6927.122 kb on + strand, within AO356_29785 at 6927.139 kb on - strand, within AO356_29785 at 6927.176 kb on - strand, within AO356_29785 at 6927.313 kb on + strand at 6927.326 kb on - strand at 6927.451 kb on + strand, within AO356_29790 at 6927.472 kb on + strand, within AO356_29790 at 6927.473 kb on - strand, within AO356_29790 at 6927.493 kb on - strand, within AO356_29790 at 6927.495 kb on + strand, within AO356_29790 at 6927.502 kb on + strand, within AO356_29790 at 6927.502 kb on + strand, within AO356_29790 at 6927.559 kb on - strand, within AO356_29790 at 6927.600 kb on + strand, within AO356_29790 at 6927.601 kb on - strand, within AO356_29790 at 6927.602 kb on + strand, within AO356_29790 at 6927.602 kb on + strand, within AO356_29790 at 6927.822 kb on + strand, within AO356_29790 at 6927.823 kb on - strand, within AO356_29790 at 6927.823 kb on - strand, within AO356_29790 at 6927.883 kb on - strand, within AO356_29790 at 6927.942 kb on - strand at 6927.996 kb on + strand at 6927.996 kb on + strand at 6927.997 kb on - strand at 6928.060 kb on + strand at 6928.178 kb on - strand, within AO356_29795 at 6928.262 kb on - strand, within AO356_29795 at 6928.339 kb on + strand, within AO356_29795 at 6928.807 kb on - strand at 6928.810 kb on + strand at 6928.810 kb on + strand at 6928.811 kb on - strand at 6928.918 kb on + strand at 6928.932 kb on + strand at 6928.932 kb on + strand at 6928.932 kb on + strand at 6928.932 kb on + strand at 6928.932 kb on + strand at 6928.933 kb on - strand at 6928.936 kb on + strand at 6928.936 kb on + strand at 6928.936 kb on + strand at 6928.937 kb on - strand at 6928.938 kb on + strand at 6928.938 kb on + strand at 6928.938 kb on + strand at 6928.938 kb on + strand at 6928.938 kb on + strand at 6928.938 kb on + strand at 6928.939 kb on - strand at 6928.939 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 6,926,363 + AO356_29780 0.83 +0.9 6,926,363 + AO356_29780 0.83 +1.4 6,926,364 - AO356_29780 0.83 -1.1 6,926,364 - AO356_29780 0.83 -0.8 6,926,433 + AO356_29780 0.89 +0.0 6,926,544 + -0.2 6,926,545 - -0.7 6,926,545 - -0.5 6,926,748 + AO356_29785 0.26 +0.2 6,926,789 - AO356_29785 0.32 -0.6 6,926,901 - AO356_29785 0.48 +0.6 6,926,967 - AO356_29785 0.57 +0.8 6,926,967 - AO356_29785 0.57 -0.0 6,926,989 - AO356_29785 0.60 -0.0 6,927,122 + AO356_29785 0.79 -1.2 6,927,139 - AO356_29785 0.81 -0.2 6,927,176 - AO356_29785 0.86 +0.4 6,927,313 + -0.0 6,927,326 - +0.6 6,927,451 + AO356_29790 0.25 -0.4 6,927,472 + AO356_29790 0.28 -0.4 6,927,473 - AO356_29790 0.28 +0.4 6,927,493 - AO356_29790 0.31 -0.4 6,927,495 + AO356_29790 0.32 -0.7 6,927,502 + AO356_29790 0.33 +0.9 6,927,502 + AO356_29790 0.33 -0.4 6,927,559 - AO356_29790 0.41 -0.8 6,927,600 + AO356_29790 0.47 -0.3 6,927,601 - AO356_29790 0.47 -0.6 6,927,602 + AO356_29790 0.47 +0.1 6,927,602 + AO356_29790 0.47 +0.7 6,927,822 + AO356_29790 0.79 +0.1 6,927,823 - AO356_29790 0.79 +0.8 6,927,823 - AO356_29790 0.79 -0.6 6,927,883 - AO356_29790 0.88 -0.6 6,927,942 - -1.6 6,927,996 + +0.5 6,927,996 + -0.0 6,927,997 - +0.1 6,928,060 + +0.1 6,928,178 - AO356_29795 0.22 -2.5 6,928,262 - AO356_29795 0.33 +0.1 6,928,339 + AO356_29795 0.42 -0.6 6,928,807 - -1.0 6,928,810 + +0.2 6,928,810 + +0.1 6,928,811 - -0.3 6,928,918 + +1.0 6,928,932 + +0.7 6,928,932 + -0.3 6,928,932 + -0.9 6,928,932 + -0.5 6,928,932 + +1.0 6,928,933 - -1.0 6,928,936 + -1.0 6,928,936 + -0.1 6,928,936 + +0.1 6,928,937 - +0.1 6,928,938 + +0.4 6,928,938 + -1.2 6,928,938 + -0.0 6,928,938 + +0.8 6,928,938 + +0.2 6,928,938 + -0.0 6,928,939 - +1.2 6,928,939 - +1.3
Or see this region's nucleotide sequence