Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29495 and AO356_29500 are separated by 32 nucleotides AO356_29500 and AO356_29505 are separated by 191 nucleotides AO356_29505 and AO356_29510 are separated by 1 nucleotides AO356_29510 and AO356_29515 are separated by 52 nucleotides
AO356_29495: AO356_29495 - NADPH:quinone oxidoreductase, at 6,860,598 to 6,861,572
_29495
AO356_29500: AO356_29500 - monooxygenase, at 6,861,605 to 6,861,964
_29500
AO356_29505: AO356_29505 - biopolymer transporter ExbD, at 6,862,156 to 6,862,557
_29505
AO356_29510: AO356_29510 - biopolymer transporter ExbB, at 6,862,559 to 6,863,278
_29510
AO356_29515: AO356_29515 - energy transducer TonB, at 6,863,331 to 6,864,140
_29515
Position (kb)
6862
6863
6864 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6861.584 kb on + strand at 6861.584 kb on + strand at 6861.612 kb on - strand at 6861.765 kb on + strand, within AO356_29500 at 6861.766 kb on - strand, within AO356_29500 at 6861.766 kb on - strand, within AO356_29500 at 6861.910 kb on + strand, within AO356_29500 at 6861.910 kb on + strand, within AO356_29500 at 6861.938 kb on - strand at 6861.938 kb on - strand at 6861.994 kb on + strand at 6861.994 kb on + strand at 6861.994 kb on + strand at 6861.994 kb on + strand at 6861.995 kb on - strand at 6862.026 kb on - strand at 6862.026 kb on - strand at 6862.042 kb on + strand at 6862.082 kb on + strand at 6862.082 kb on + strand at 6862.089 kb on + strand at 6862.089 kb on + strand at 6862.089 kb on + strand at 6862.089 kb on + strand at 6862.090 kb on - strand at 6862.090 kb on - strand at 6862.090 kb on - strand at 6862.090 kb on - strand at 6862.090 kb on - strand at 6862.090 kb on - strand at 6862.157 kb on + strand at 6862.158 kb on - strand at 6862.158 kb on - strand at 6862.232 kb on + strand, within AO356_29505 at 6862.233 kb on - strand, within AO356_29505 at 6862.233 kb on - strand, within AO356_29505 at 6862.233 kb on - strand, within AO356_29505 at 6862.267 kb on + strand, within AO356_29505 at 6862.267 kb on + strand, within AO356_29505 at 6862.268 kb on - strand, within AO356_29505 at 6862.268 kb on - strand, within AO356_29505 at 6862.465 kb on - strand, within AO356_29505 at 6862.465 kb on - strand, within AO356_29505 at 6862.654 kb on + strand, within AO356_29510 at 6862.655 kb on - strand, within AO356_29510 at 6862.656 kb on + strand at 6862.656 kb on + strand, within AO356_29510 at 6862.656 kb on + strand, within AO356_29510 at 6862.657 kb on - strand, within AO356_29510 at 6862.657 kb on - strand, within AO356_29510 at 6862.657 kb on - strand, within AO356_29510 at 6862.716 kb on + strand, within AO356_29510 at 6862.716 kb on + strand, within AO356_29510 at 6862.717 kb on - strand, within AO356_29510 at 6862.717 kb on - strand, within AO356_29510 at 6862.722 kb on + strand, within AO356_29510 at 6862.723 kb on - strand, within AO356_29510 at 6862.796 kb on + strand, within AO356_29510 at 6862.877 kb on + strand, within AO356_29510 at 6862.878 kb on - strand, within AO356_29510 at 6862.878 kb on - strand, within AO356_29510 at 6863.046 kb on + strand, within AO356_29510 at 6863.162 kb on + strand, within AO356_29510 at 6863.271 kb on - strand at 6863.271 kb on - strand at 6863.271 kb on - strand at 6863.328 kb on + strand at 6863.328 kb on + strand at 6863.328 kb on + strand at 6863.328 kb on + strand at 6863.328 kb on + strand at 6863.329 kb on - strand at 6863.329 kb on - strand at 6863.329 kb on - strand at 6863.329 kb on - strand at 6863.333 kb on - strand at 6863.351 kb on + strand at 6863.351 kb on + strand at 6863.355 kb on + strand at 6863.355 kb on + strand at 6863.356 kb on - strand at 6863.356 kb on - strand at 6863.356 kb on - strand at 6863.356 kb on - strand at 6863.356 kb on - strand at 6863.584 kb on + strand, within AO356_29515 at 6863.585 kb on - strand, within AO356_29515 at 6864.206 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 6,861,584 + +1.0 6,861,584 + +0.3 6,861,612 - -0.1 6,861,765 + AO356_29500 0.44 +0.4 6,861,766 - AO356_29500 0.45 +0.9 6,861,766 - AO356_29500 0.45 -0.0 6,861,910 + AO356_29500 0.85 +0.9 6,861,910 + AO356_29500 0.85 +1.0 6,861,938 - +0.0 6,861,938 - +0.4 6,861,994 + +0.9 6,861,994 + -1.2 6,861,994 + +0.5 6,861,994 + +0.6 6,861,995 - +0.6 6,862,026 - -3.4 6,862,026 - +1.4 6,862,042 + -0.4 6,862,082 + +1.1 6,862,082 + +0.0 6,862,089 + +0.2 6,862,089 + -0.2 6,862,089 + +0.5 6,862,089 + +0.0 6,862,090 - +0.3 6,862,090 - -0.4 6,862,090 - +0.9 6,862,090 - +0.0 6,862,090 - +0.0 6,862,090 - +0.3 6,862,157 + -0.1 6,862,158 - +0.7 6,862,158 - -0.2 6,862,232 + AO356_29505 0.19 +0.0 6,862,233 - AO356_29505 0.19 -0.6 6,862,233 - AO356_29505 0.19 +0.1 6,862,233 - AO356_29505 0.19 +0.6 6,862,267 + AO356_29505 0.28 +0.5 6,862,267 + AO356_29505 0.28 +0.4 6,862,268 - AO356_29505 0.28 +0.3 6,862,268 - AO356_29505 0.28 +0.1 6,862,465 - AO356_29505 0.77 +1.4 6,862,465 - AO356_29505 0.77 -3.1 6,862,654 + AO356_29510 0.13 -0.7 6,862,655 - AO356_29510 0.13 -1.3 6,862,656 + +1.8 6,862,656 + AO356_29510 0.13 +0.2 6,862,656 + AO356_29510 0.13 -0.3 6,862,657 - AO356_29510 0.14 +0.2 6,862,657 - AO356_29510 0.14 -0.5 6,862,657 - AO356_29510 0.14 +0.4 6,862,716 + AO356_29510 0.22 -1.4 6,862,716 + AO356_29510 0.22 +0.4 6,862,717 - AO356_29510 0.22 -0.2 6,862,717 - AO356_29510 0.22 +0.8 6,862,722 + AO356_29510 0.23 -0.3 6,862,723 - AO356_29510 0.23 -1.8 6,862,796 + AO356_29510 0.33 +0.5 6,862,877 + AO356_29510 0.44 +0.2 6,862,878 - AO356_29510 0.44 +0.6 6,862,878 - AO356_29510 0.44 +0.1 6,863,046 + AO356_29510 0.68 +0.5 6,863,162 + AO356_29510 0.84 -0.1 6,863,271 - +1.2 6,863,271 - -0.2 6,863,271 - -0.2 6,863,328 + +0.2 6,863,328 + +1.1 6,863,328 + +0.3 6,863,328 + +0.9 6,863,328 + +0.2 6,863,329 - -0.1 6,863,329 - +1.0 6,863,329 - -0.2 6,863,329 - +0.4 6,863,333 - +0.3 6,863,351 + -0.4 6,863,351 + +1.2 6,863,355 + -1.6 6,863,355 + +1.2 6,863,356 - +0.9 6,863,356 - +0.2 6,863,356 - +0.4 6,863,356 - +0.6 6,863,356 - +0.6 6,863,584 + AO356_29515 0.31 +0.8 6,863,585 - AO356_29515 0.31 -2.4 6,864,206 - -0.7
Or see this region's nucleotide sequence