Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26825 and AO356_26830 overlap by 1 nucleotides AO356_26830 and AO356_26835 are separated by 503 nucleotides
AO356_26825: AO356_26825 - histidine kinase, at 6,107,797 to 6,109,170
_26825
AO356_26830: AO356_26830 - transcriptional regulator, at 6,109,170 to 6,109,874
_26830
AO356_26835: AO356_26835 - type VI secretion protein ImpA, at 6,110,378 to 6,112,603
_26835
Position (kb)
6109
6110 Strain fitness (log2 ratio)
-1
0
1 at 6108.692 kb on - strand, within AO356_26825 at 6108.692 kb on - strand, within AO356_26825 at 6108.747 kb on + strand, within AO356_26825 at 6108.835 kb on - strand, within AO356_26825 at 6108.890 kb on + strand, within AO356_26825 at 6108.894 kb on + strand, within AO356_26825 at 6108.895 kb on - strand, within AO356_26825 at 6108.998 kb on + strand, within AO356_26825 at 6108.999 kb on - strand, within AO356_26825 at 6109.179 kb on - strand at 6109.193 kb on + strand at 6109.193 kb on + strand at 6109.194 kb on - strand at 6109.215 kb on + strand at 6109.215 kb on + strand at 6109.215 kb on + strand at 6109.216 kb on - strand at 6109.216 kb on - strand at 6109.220 kb on - strand at 6109.220 kb on - strand at 6109.585 kb on + strand, within AO356_26830 at 6109.585 kb on + strand, within AO356_26830 at 6109.697 kb on - strand, within AO356_26830 at 6109.697 kb on - strand, within AO356_26830 at 6109.741 kb on + strand, within AO356_26830 at 6109.742 kb on - strand, within AO356_26830 at 6109.759 kb on + strand, within AO356_26830 at 6109.802 kb on - strand, within AO356_26830 at 6109.802 kb on - strand, within AO356_26830 at 6109.802 kb on - strand, within AO356_26830 at 6109.831 kb on + strand at 6109.831 kb on + strand at 6109.831 kb on + strand at 6109.832 kb on - strand at 6109.915 kb on + strand at 6110.056 kb on + strand at 6110.086 kb on + strand at 6110.086 kb on + strand at 6110.087 kb on - strand at 6110.134 kb on + strand at 6110.135 kb on - strand at 6110.153 kb on + strand at 6110.212 kb on + strand at 6110.541 kb on + strand at 6110.541 kb on + strand at 6110.542 kb on - strand at 6110.799 kb on - strand, within AO356_26835 at 6110.825 kb on + strand, within AO356_26835
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 6,108,692 - AO356_26825 0.65 -0.3 6,108,692 - AO356_26825 0.65 -0.0 6,108,747 + AO356_26825 0.69 -0.7 6,108,835 - AO356_26825 0.76 +0.6 6,108,890 + AO356_26825 0.80 -0.5 6,108,894 + AO356_26825 0.80 -0.8 6,108,895 - AO356_26825 0.80 -0.5 6,108,998 + AO356_26825 0.87 -0.4 6,108,999 - AO356_26825 0.87 -0.9 6,109,179 - -0.4 6,109,193 + +1.1 6,109,193 + -0.3 6,109,194 - +0.8 6,109,215 + +0.3 6,109,215 + +0.4 6,109,215 + -0.2 6,109,216 - +0.8 6,109,216 - -0.2 6,109,220 - -0.4 6,109,220 - +0.3 6,109,585 + AO356_26830 0.59 -0.2 6,109,585 + AO356_26830 0.59 -0.5 6,109,697 - AO356_26830 0.75 -0.2 6,109,697 - AO356_26830 0.75 +1.0 6,109,741 + AO356_26830 0.81 -0.3 6,109,742 - AO356_26830 0.81 +0.4 6,109,759 + AO356_26830 0.84 -1.0 6,109,802 - AO356_26830 0.90 -0.7 6,109,802 - AO356_26830 0.90 +0.2 6,109,802 - AO356_26830 0.90 +0.3 6,109,831 + +1.3 6,109,831 + +0.7 6,109,831 + +0.5 6,109,832 - +1.0 6,109,915 + +0.9 6,110,056 + -0.8 6,110,086 + +0.6 6,110,086 + +1.7 6,110,087 - +0.2 6,110,134 + -0.2 6,110,135 - +0.5 6,110,153 + +1.0 6,110,212 + -0.2 6,110,541 + +0.8 6,110,541 + +0.1 6,110,542 - +0.1 6,110,799 - AO356_26835 0.19 +1.0 6,110,825 + AO356_26835 0.20 -0.5
Or see this region's nucleotide sequence