Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26815 and AO356_26820 are separated by 38 nucleotides AO356_26820 and AO356_26825 are separated by 129 nucleotides AO356_26825 and AO356_26830 overlap by 1 nucleotides
AO356_26815: AO356_26815 - short-chain dehydrogenase, at 6,106,310 to 6,107,368
_26815
AO356_26820: AO356_26820 - hypothetical protein, at 6,107,407 to 6,107,667
_26820
AO356_26825: AO356_26825 - histidine kinase, at 6,107,797 to 6,109,170
_26825
AO356_26830: AO356_26830 - transcriptional regulator, at 6,109,170 to 6,109,874
_26830
Position (kb)
6107
6108
6109
6110 Strain fitness (log2 ratio)
-1
0
1 at 6106.857 kb on + strand, within AO356_26815 at 6107.201 kb on + strand, within AO356_26815 at 6107.477 kb on + strand, within AO356_26820 at 6107.477 kb on + strand, within AO356_26820 at 6107.564 kb on + strand, within AO356_26820 at 6107.780 kb on + strand at 6108.055 kb on + strand, within AO356_26825 at 6108.056 kb on - strand, within AO356_26825 at 6108.056 kb on - strand, within AO356_26825 at 6108.692 kb on - strand, within AO356_26825 at 6108.692 kb on - strand, within AO356_26825 at 6108.747 kb on + strand, within AO356_26825 at 6108.835 kb on - strand, within AO356_26825 at 6108.890 kb on + strand, within AO356_26825 at 6108.894 kb on + strand, within AO356_26825 at 6108.895 kb on - strand, within AO356_26825 at 6108.998 kb on + strand, within AO356_26825 at 6108.999 kb on - strand, within AO356_26825 at 6109.179 kb on - strand at 6109.193 kb on + strand at 6109.193 kb on + strand at 6109.194 kb on - strand at 6109.215 kb on + strand at 6109.215 kb on + strand at 6109.215 kb on + strand at 6109.216 kb on - strand at 6109.216 kb on - strand at 6109.220 kb on - strand at 6109.220 kb on - strand at 6109.585 kb on + strand, within AO356_26830 at 6109.585 kb on + strand, within AO356_26830 at 6109.697 kb on - strand, within AO356_26830 at 6109.697 kb on - strand, within AO356_26830 at 6109.741 kb on + strand, within AO356_26830 at 6109.742 kb on - strand, within AO356_26830 at 6109.759 kb on + strand, within AO356_26830 at 6109.802 kb on - strand, within AO356_26830 at 6109.802 kb on - strand, within AO356_26830 at 6109.802 kb on - strand, within AO356_26830 at 6109.831 kb on + strand at 6109.831 kb on + strand at 6109.831 kb on + strand at 6109.832 kb on - strand at 6109.915 kb on + strand at 6110.056 kb on + strand at 6110.086 kb on + strand at 6110.086 kb on + strand at 6110.087 kb on - strand at 6110.134 kb on + strand at 6110.135 kb on - strand at 6110.153 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 6,106,857 + AO356_26815 0.52 +0.5 6,107,201 + AO356_26815 0.84 +0.1 6,107,477 + AO356_26820 0.27 -0.1 6,107,477 + AO356_26820 0.27 -0.2 6,107,564 + AO356_26820 0.60 +0.1 6,107,780 + +0.1 6,108,055 + AO356_26825 0.19 -0.1 6,108,056 - AO356_26825 0.19 -0.5 6,108,056 - AO356_26825 0.19 -0.5 6,108,692 - AO356_26825 0.65 -0.3 6,108,692 - AO356_26825 0.65 -0.0 6,108,747 + AO356_26825 0.69 -0.7 6,108,835 - AO356_26825 0.76 +0.6 6,108,890 + AO356_26825 0.80 -0.5 6,108,894 + AO356_26825 0.80 -0.8 6,108,895 - AO356_26825 0.80 -0.5 6,108,998 + AO356_26825 0.87 -0.4 6,108,999 - AO356_26825 0.87 -0.9 6,109,179 - -0.4 6,109,193 + +1.1 6,109,193 + -0.3 6,109,194 - +0.8 6,109,215 + +0.3 6,109,215 + +0.4 6,109,215 + -0.2 6,109,216 - +0.8 6,109,216 - -0.2 6,109,220 - -0.4 6,109,220 - +0.3 6,109,585 + AO356_26830 0.59 -0.2 6,109,585 + AO356_26830 0.59 -0.5 6,109,697 - AO356_26830 0.75 -0.2 6,109,697 - AO356_26830 0.75 +1.0 6,109,741 + AO356_26830 0.81 -0.3 6,109,742 - AO356_26830 0.81 +0.4 6,109,759 + AO356_26830 0.84 -1.0 6,109,802 - AO356_26830 0.90 -0.7 6,109,802 - AO356_26830 0.90 +0.2 6,109,802 - AO356_26830 0.90 +0.3 6,109,831 + +1.3 6,109,831 + +0.7 6,109,831 + +0.5 6,109,832 - +1.0 6,109,915 + +0.9 6,110,056 + -0.8 6,110,086 + +0.6 6,110,086 + +1.7 6,110,087 - +0.2 6,110,134 + -0.2 6,110,135 - +0.5 6,110,153 + +1.0
Or see this region's nucleotide sequence