Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22610 and AO356_22615 are separated by 76 nucleotides AO356_22615 and AO356_22620 overlap by 14 nucleotides AO356_22620 and AO356_22625 are separated by 40 nucleotides
AO356_22610: AO356_22610 - hypothetical protein, at 5,053,186 to 5,053,728
_22610
AO356_22615: AO356_22615 - nodulation protein NolW, at 5,053,805 to 5,054,443
_22615
AO356_22620: AO356_22620 - ATPase, at 5,054,430 to 5,055,506
_22620
AO356_22625: AO356_22625 - nitrate ABC transporter ATP-binding protein, at 5,055,547 to 5,056,851
_22625
Position (kb) 5054
5055
5056 Strain fitness (log2 ratio) -1
0
1 at 5053.728 kb on + strand at 5053.728 kb on + strand at 5053.728 kb on + strand at 5053.729 kb on - strand at 5053.729 kb on - strand at 5053.729 kb on - strand at 5054.590 kb on + strand, within AO356_22620 at 5054.591 kb on - strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.206 kb on - strand, within AO356_22620 at 5055.206 kb on - strand, within AO356_22620 at 5055.534 kb on - strand at 5055.534 kb on - strand at 5055.534 kb on - strand at 5055.536 kb on - strand at 5055.591 kb on - strand at 5055.639 kb on + strand at 5055.640 kb on - strand at 5055.758 kb on + strand, within AO356_22625 at 5055.758 kb on + strand, within AO356_22625 at 5055.758 kb on + strand, within AO356_22625 at 5055.758 kb on + strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.762 kb on + strand, within AO356_22625 at 5055.762 kb on + strand, within AO356_22625 at 5055.762 kb on + strand, within AO356_22625 at 5055.762 kb on + strand, within AO356_22625 at 5055.763 kb on - strand, within AO356_22625 at 5055.763 kb on - strand, within AO356_22625 at 5055.763 kb on - strand, within AO356_22625 at 5055.763 kb on - strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.245 kb on + strand, within AO356_22625 at 5056.245 kb on + strand, within AO356_22625 at 5056.333 kb on + strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.473 kb on + strand, within AO356_22625
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 5,053,728 + +0.0 5,053,728 + +0.8 5,053,728 + +0.4 5,053,729 - -0.2 5,053,729 - -0.7 5,053,729 - +0.5 5,054,590 + AO356_22620 0.15 -0.6 5,054,591 - AO356_22620 0.15 -1.2 5,055,205 + AO356_22620 0.72 +0.5 5,055,205 + AO356_22620 0.72 +0.3 5,055,205 + AO356_22620 0.72 +0.5 5,055,205 + AO356_22620 0.72 -0.6 5,055,206 - AO356_22620 0.72 -1.5 5,055,206 - AO356_22620 0.72 -0.4 5,055,534 - -0.9 5,055,534 - +0.1 5,055,534 - -0.6 5,055,536 - +0.2 5,055,591 - -0.2 5,055,639 + -0.1 5,055,640 - +0.2 5,055,758 + AO356_22625 0.16 +0.1 5,055,758 + AO356_22625 0.16 -1.0 5,055,758 + AO356_22625 0.16 +0.1 5,055,758 + AO356_22625 0.16 -0.1 5,055,759 - AO356_22625 0.16 +0.4 5,055,759 - AO356_22625 0.16 -0.6 5,055,759 - AO356_22625 0.16 -0.3 5,055,759 - AO356_22625 0.16 -0.8 5,055,759 - AO356_22625 0.16 -0.9 5,055,759 - AO356_22625 0.16 +0.0 5,055,762 + AO356_22625 0.16 +0.9 5,055,762 + AO356_22625 0.16 +0.0 5,055,762 + AO356_22625 0.16 -1.6 5,055,762 + AO356_22625 0.16 -1.1 5,055,763 - AO356_22625 0.17 +0.8 5,055,763 - AO356_22625 0.17 -0.1 5,055,763 - AO356_22625 0.17 +0.2 5,055,763 - AO356_22625 0.17 +0.8 5,056,100 + AO356_22625 0.42 -0.4 5,056,100 + AO356_22625 0.42 -0.4 5,056,100 + AO356_22625 0.42 -0.9 5,056,100 + AO356_22625 0.42 -0.6 5,056,100 + AO356_22625 0.42 +0.1 5,056,101 - AO356_22625 0.42 -0.5 5,056,101 - AO356_22625 0.42 +1.4 5,056,101 - AO356_22625 0.42 +0.7 5,056,101 - AO356_22625 0.42 +0.5 5,056,245 + AO356_22625 0.53 -0.4 5,056,245 + AO356_22625 0.53 +0.5 5,056,333 + AO356_22625 0.60 +1.2 5,056,334 - AO356_22625 0.60 +0.2 5,056,334 - AO356_22625 0.60 -1.2 5,056,334 - AO356_22625 0.60 +1.0 5,056,473 + AO356_22625 0.71 -0.3
Or see this region's nucleotide sequence