Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22605 and AO356_22610 are separated by 164 nucleotides AO356_22610 and AO356_22615 are separated by 76 nucleotides AO356_22615 and AO356_22620 overlap by 14 nucleotides
AO356_22605: AO356_22605 - transporter, at 5,052,098 to 5,053,021
_22605
AO356_22610: AO356_22610 - hypothetical protein, at 5,053,186 to 5,053,728
_22610
AO356_22615: AO356_22615 - nodulation protein NolW, at 5,053,805 to 5,054,443
_22615
AO356_22620: AO356_22620 - ATPase, at 5,054,430 to 5,055,506
_22620
Position (kb) 5053
5054 Strain fitness (log2 ratio) -2
-1
0
1 at 5052.198 kb on - strand, within AO356_22605 at 5052.198 kb on - strand, within AO356_22605 at 5052.233 kb on + strand, within AO356_22605 at 5052.233 kb on + strand, within AO356_22605 at 5052.233 kb on + strand, within AO356_22605 at 5052.234 kb on - strand, within AO356_22605 at 5052.234 kb on - strand, within AO356_22605 at 5052.395 kb on + strand, within AO356_22605 at 5052.395 kb on + strand, within AO356_22605 at 5052.395 kb on + strand, within AO356_22605 at 5052.396 kb on - strand, within AO356_22605 at 5052.435 kb on + strand, within AO356_22605 at 5052.519 kb on + strand, within AO356_22605 at 5052.519 kb on + strand, within AO356_22605 at 5052.519 kb on + strand, within AO356_22605 at 5052.520 kb on - strand, within AO356_22605 at 5052.520 kb on - strand, within AO356_22605 at 5052.577 kb on + strand, within AO356_22605 at 5052.578 kb on - strand, within AO356_22605 at 5052.594 kb on + strand, within AO356_22605 at 5052.629 kb on + strand, within AO356_22605 at 5052.630 kb on - strand, within AO356_22605 at 5052.630 kb on - strand, within AO356_22605 at 5052.630 kb on - strand, within AO356_22605 at 5052.652 kb on + strand, within AO356_22605 at 5052.652 kb on + strand, within AO356_22605 at 5052.652 kb on + strand, within AO356_22605 at 5052.653 kb on - strand, within AO356_22605 at 5052.686 kb on + strand, within AO356_22605 at 5052.816 kb on - strand, within AO356_22605 at 5052.830 kb on + strand, within AO356_22605 at 5052.831 kb on - strand, within AO356_22605 at 5052.831 kb on - strand, within AO356_22605 at 5052.831 kb on - strand, within AO356_22605 at 5052.831 kb on - strand, within AO356_22605 at 5052.875 kb on + strand, within AO356_22605 at 5052.875 kb on + strand, within AO356_22605 at 5052.876 kb on - strand, within AO356_22605 at 5052.876 kb on - strand, within AO356_22605 at 5052.876 kb on - strand, within AO356_22605 at 5052.876 kb on - strand, within AO356_22605 at 5052.912 kb on + strand, within AO356_22605 at 5053.202 kb on + strand at 5053.202 kb on + strand at 5053.202 kb on + strand at 5053.404 kb on + strand, within AO356_22610 at 5053.728 kb on + strand at 5053.728 kb on + strand at 5053.728 kb on + strand at 5053.729 kb on - strand at 5053.729 kb on - strand at 5053.729 kb on - strand at 5054.590 kb on + strand, within AO356_22620 at 5054.591 kb on - strand, within AO356_22620
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 5,052,198 - AO356_22605 0.11 -0.7 5,052,198 - AO356_22605 0.11 -0.7 5,052,233 + AO356_22605 0.15 -0.1 5,052,233 + AO356_22605 0.15 +0.7 5,052,233 + AO356_22605 0.15 +0.1 5,052,234 - AO356_22605 0.15 +0.5 5,052,234 - AO356_22605 0.15 -0.1 5,052,395 + AO356_22605 0.32 -0.2 5,052,395 + AO356_22605 0.32 +0.4 5,052,395 + AO356_22605 0.32 +0.7 5,052,396 - AO356_22605 0.32 +1.0 5,052,435 + AO356_22605 0.36 +0.1 5,052,519 + AO356_22605 0.46 +1.0 5,052,519 + AO356_22605 0.46 +0.1 5,052,519 + AO356_22605 0.46 -0.6 5,052,520 - AO356_22605 0.46 -0.4 5,052,520 - AO356_22605 0.46 -0.7 5,052,577 + AO356_22605 0.52 +0.8 5,052,578 - AO356_22605 0.52 +0.5 5,052,594 + AO356_22605 0.54 +0.1 5,052,629 + AO356_22605 0.57 +1.0 5,052,630 - AO356_22605 0.58 +0.6 5,052,630 - AO356_22605 0.58 -0.8 5,052,630 - AO356_22605 0.58 -0.7 5,052,652 + AO356_22605 0.60 +0.1 5,052,652 + AO356_22605 0.60 -0.1 5,052,652 + AO356_22605 0.60 -0.0 5,052,653 - AO356_22605 0.60 +1.6 5,052,686 + AO356_22605 0.64 +0.3 5,052,816 - AO356_22605 0.78 +0.0 5,052,830 + AO356_22605 0.79 +0.3 5,052,831 - AO356_22605 0.79 -0.0 5,052,831 - AO356_22605 0.79 -0.1 5,052,831 - AO356_22605 0.79 -2.2 5,052,831 - AO356_22605 0.79 -0.9 5,052,875 + AO356_22605 0.84 -0.3 5,052,875 + AO356_22605 0.84 -1.0 5,052,876 - AO356_22605 0.84 +1.5 5,052,876 - AO356_22605 0.84 -0.4 5,052,876 - AO356_22605 0.84 -0.0 5,052,876 - AO356_22605 0.84 -1.0 5,052,912 + AO356_22605 0.88 +1.2 5,053,202 + -0.2 5,053,202 + +0.3 5,053,202 + -0.1 5,053,404 + AO356_22610 0.40 +1.4 5,053,728 + +0.0 5,053,728 + +0.8 5,053,728 + +0.4 5,053,729 - -0.2 5,053,729 - -0.7 5,053,729 - +0.5 5,054,590 + AO356_22620 0.15 -0.6 5,054,591 - AO356_22620 0.15 -1.2
Or see this region's nucleotide sequence