Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21520 and AO356_21525 are separated by 125 nucleotides AO356_21525 and AO356_21530 are separated by 33 nucleotides AO356_21530 and AO356_21535 are separated by 449 nucleotides AO356_21535 and AO356_21540 are separated by 117 nucleotides
AO356_21520: AO356_21520 - hypothetical protein, at 4,820,723 to 4,821,247
_21520
AO356_21525: AO356_21525 - hypothetical protein, at 4,821,373 to 4,821,987
_21525
AO356_21530: AO356_21530 - hypothetical protein, at 4,822,021 to 4,822,752
_21530
AO356_21535: AO356_21535 - hypothetical protein, at 4,823,202 to 4,823,402
_21535
AO356_21540: AO356_21540 - hypothetical protein, at 4,823,520 to 4,824,026
_21540
Position (kb)
4822
4823 Strain fitness (log2 ratio)
-1
0
1
2 at 4821.030 kb on + strand, within AO356_21520 at 4821.031 kb on - strand, within AO356_21520 at 4821.031 kb on - strand, within AO356_21520 at 4821.031 kb on - strand, within AO356_21520 at 4821.075 kb on - strand, within AO356_21520 at 4821.083 kb on + strand, within AO356_21520 at 4821.084 kb on - strand, within AO356_21520 at 4821.084 kb on - strand, within AO356_21520 at 4821.084 kb on - strand, within AO356_21520 at 4821.092 kb on + strand, within AO356_21520 at 4821.092 kb on + strand, within AO356_21520 at 4821.092 kb on + strand, within AO356_21520 at 4821.111 kb on + strand, within AO356_21520 at 4821.112 kb on - strand, within AO356_21520 at 4821.112 kb on - strand, within AO356_21520 at 4821.189 kb on + strand, within AO356_21520 at 4821.189 kb on + strand, within AO356_21520 at 4821.189 kb on + strand, within AO356_21520 at 4821.190 kb on - strand, within AO356_21520 at 4821.190 kb on - strand, within AO356_21520 at 4821.197 kb on + strand at 4821.197 kb on + strand at 4821.197 kb on + strand at 4821.198 kb on - strand at 4821.198 kb on - strand at 4821.198 kb on - strand at 4821.198 kb on - strand at 4821.292 kb on + strand at 4821.292 kb on + strand at 4821.292 kb on + strand at 4821.293 kb on - strand at 4821.293 kb on - strand at 4821.296 kb on + strand at 4821.296 kb on + strand at 4821.296 kb on + strand at 4821.297 kb on - strand at 4821.297 kb on - strand at 4821.317 kb on + strand at 4821.317 kb on + strand at 4821.318 kb on - strand at 4821.319 kb on + strand at 4821.320 kb on - strand at 4821.320 kb on - strand at 4821.324 kb on + strand at 4821.358 kb on + strand at 4821.358 kb on + strand at 4821.358 kb on + strand at 4821.358 kb on + strand at 4821.359 kb on - strand at 4821.359 kb on - strand at 4821.359 kb on - strand at 4821.360 kb on + strand at 4821.361 kb on - strand at 4821.372 kb on + strand at 4821.373 kb on - strand at 4821.417 kb on + strand at 4821.417 kb on + strand at 4821.419 kb on + strand at 4821.419 kb on + strand at 4821.419 kb on + strand at 4821.419 kb on + strand at 4821.419 kb on + strand at 4821.420 kb on - strand at 4821.420 kb on - strand at 4821.420 kb on - strand at 4821.458 kb on + strand, within AO356_21525 at 4821.459 kb on - strand, within AO356_21525 at 4821.479 kb on + strand, within AO356_21525 at 4821.479 kb on + strand, within AO356_21525 at 4821.479 kb on + strand, within AO356_21525 at 4821.501 kb on + strand, within AO356_21525 at 4821.541 kb on - strand, within AO356_21525 at 4821.558 kb on - strand, within AO356_21525 at 4821.562 kb on + strand, within AO356_21525 at 4821.563 kb on - strand, within AO356_21525 at 4821.563 kb on - strand, within AO356_21525 at 4821.563 kb on - strand, within AO356_21525 at 4821.569 kb on + strand, within AO356_21525 at 4821.730 kb on + strand, within AO356_21525 at 4821.731 kb on - strand, within AO356_21525 at 4821.811 kb on - strand, within AO356_21525 at 4821.811 kb on - strand, within AO356_21525 at 4821.818 kb on + strand, within AO356_21525 at 4821.960 kb on + strand at 4821.988 kb on + strand at 4822.027 kb on + strand at 4822.027 kb on + strand at 4822.027 kb on + strand at 4822.027 kb on + strand at 4822.028 kb on - strand at 4822.033 kb on + strand at 4822.034 kb on - strand at 4822.036 kb on - strand at 4822.112 kb on + strand, within AO356_21530 at 4822.113 kb on - strand, within AO356_21530 at 4822.141 kb on + strand, within AO356_21530 at 4822.141 kb on + strand, within AO356_21530 at 4822.144 kb on + strand, within AO356_21530 at 4822.144 kb on + strand, within AO356_21530 at 4822.145 kb on - strand, within AO356_21530 at 4822.145 kb on - strand, within AO356_21530 at 4822.145 kb on - strand, within AO356_21530 at 4822.145 kb on - strand, within AO356_21530 at 4822.145 kb on - strand, within AO356_21530 at 4822.148 kb on + strand, within AO356_21530 at 4822.148 kb on + strand, within AO356_21530 at 4822.148 kb on + strand, within AO356_21530 at 4822.148 kb on + strand, within AO356_21530 at 4822.148 kb on + strand, within AO356_21530 at 4822.148 kb on + strand, within AO356_21530 at 4822.148 kb on + strand, within AO356_21530 at 4822.148 kb on + strand, within AO356_21530 at 4822.148 kb on + strand, within AO356_21530 at 4822.149 kb on - strand, within AO356_21530 at 4822.149 kb on - strand, within AO356_21530 at 4822.149 kb on - strand, within AO356_21530 at 4822.149 kb on - strand, within AO356_21530 at 4822.149 kb on - strand, within AO356_21530 at 4822.149 kb on - strand, within AO356_21530 at 4822.149 kb on - strand, within AO356_21530 at 4822.149 kb on - strand, within AO356_21530 at 4822.149 kb on - strand, within AO356_21530 at 4822.149 kb on - strand, within AO356_21530 at 4822.149 kb on - strand, within AO356_21530 at 4822.149 kb on - strand, within AO356_21530 at 4822.200 kb on + strand, within AO356_21530 at 4822.202 kb on + strand, within AO356_21530 at 4822.202 kb on + strand, within AO356_21530 at 4822.203 kb on - strand, within AO356_21530 at 4822.203 kb on - strand, within AO356_21530 at 4822.334 kb on + strand, within AO356_21530 at 4822.335 kb on - strand, within AO356_21530 at 4822.484 kb on - strand, within AO356_21530 at 4822.597 kb on + strand, within AO356_21530 at 4822.598 kb on - strand, within AO356_21530 at 4822.598 kb on - strand, within AO356_21530 at 4822.598 kb on - strand, within AO356_21530 at 4822.677 kb on + strand, within AO356_21530 at 4822.677 kb on + strand, within AO356_21530 at 4822.678 kb on - strand, within AO356_21530 at 4822.678 kb on - strand, within AO356_21530 at 4822.678 kb on - strand, within AO356_21530 at 4822.678 kb on - strand, within AO356_21530 at 4822.678 kb on - strand, within AO356_21530 at 4822.738 kb on + strand at 4822.738 kb on + strand at 4822.784 kb on + strand at 4822.785 kb on - strand at 4822.785 kb on - strand at 4822.787 kb on - strand at 4823.023 kb on + strand at 4823.023 kb on + strand at 4823.023 kb on + strand at 4823.023 kb on + strand at 4823.023 kb on + strand at 4823.023 kb on + strand at 4823.044 kb on + strand at 4823.044 kb on + strand at 4823.044 kb on + strand at 4823.045 kb on - strand at 4823.096 kb on + strand at 4823.096 kb on + strand at 4823.096 kb on + strand at 4823.097 kb on - strand at 4823.097 kb on - strand at 4823.100 kb on + strand at 4823.101 kb on - strand at 4823.154 kb on + strand at 4823.477 kb on + strand at 4823.477 kb on + strand at 4823.478 kb on - strand at 4823.478 kb on - strand at 4823.618 kb on - strand, within AO356_21540 at 4823.632 kb on + strand, within AO356_21540 at 4823.632 kb on + strand, within AO356_21540 at 4823.641 kb on - strand, within AO356_21540 at 4823.641 kb on - strand, within AO356_21540
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 4,821,030 + AO356_21520 0.58 -0.5 4,821,031 - AO356_21520 0.59 -0.3 4,821,031 - AO356_21520 0.59 +0.7 4,821,031 - AO356_21520 0.59 -0.9 4,821,075 - AO356_21520 0.67 +0.7 4,821,083 + AO356_21520 0.69 +0.9 4,821,084 - AO356_21520 0.69 -1.1 4,821,084 - AO356_21520 0.69 +0.5 4,821,084 - AO356_21520 0.69 -0.3 4,821,092 + AO356_21520 0.70 +0.2 4,821,092 + AO356_21520 0.70 -0.5 4,821,092 + AO356_21520 0.70 +0.3 4,821,111 + AO356_21520 0.74 -0.4 4,821,112 - AO356_21520 0.74 -0.2 4,821,112 - AO356_21520 0.74 -1.5 4,821,189 + AO356_21520 0.89 -0.7 4,821,189 + AO356_21520 0.89 +0.1 4,821,189 + AO356_21520 0.89 +0.1 4,821,190 - AO356_21520 0.89 +0.5 4,821,190 - AO356_21520 0.89 -0.2 4,821,197 + -0.8 4,821,197 + +0.3 4,821,197 + +0.1 4,821,198 - +0.3 4,821,198 - +1.3 4,821,198 - +0.8 4,821,198 - -0.9 4,821,292 + -0.6 4,821,292 + -0.2 4,821,292 + +0.0 4,821,293 - +0.0 4,821,293 - -0.1 4,821,296 + -0.0 4,821,296 + +0.3 4,821,296 + -0.6 4,821,297 - +0.5 4,821,297 - +1.0 4,821,317 + -0.5 4,821,317 + -1.1 4,821,318 - -0.3 4,821,319 + +0.9 4,821,320 - +1.6 4,821,320 - -0.7 4,821,324 + -0.9 4,821,358 + -0.4 4,821,358 + +2.0 4,821,358 + -0.3 4,821,358 + +0.1 4,821,359 - +0.4 4,821,359 - +0.5 4,821,359 - +2.4 4,821,360 + -0.4 4,821,361 - -0.7 4,821,372 + +0.0 4,821,373 - +0.6 4,821,417 + +1.0 4,821,417 + -1.7 4,821,419 + -0.5 4,821,419 + +0.8 4,821,419 + -0.6 4,821,419 + +0.1 4,821,419 + -0.7 4,821,420 - -0.6 4,821,420 - +0.5 4,821,420 - -0.3 4,821,458 + AO356_21525 0.14 +0.1 4,821,459 - AO356_21525 0.14 +0.2 4,821,479 + AO356_21525 0.17 +0.2 4,821,479 + AO356_21525 0.17 +1.3 4,821,479 + AO356_21525 0.17 +0.0 4,821,501 + AO356_21525 0.21 -0.7 4,821,541 - AO356_21525 0.27 +1.0 4,821,558 - AO356_21525 0.30 -0.7 4,821,562 + AO356_21525 0.31 -0.8 4,821,563 - AO356_21525 0.31 +0.1 4,821,563 - AO356_21525 0.31 +1.8 4,821,563 - AO356_21525 0.31 +0.2 4,821,569 + AO356_21525 0.32 +0.4 4,821,730 + AO356_21525 0.58 +0.9 4,821,731 - AO356_21525 0.58 -1.3 4,821,811 - AO356_21525 0.71 -0.4 4,821,811 - AO356_21525 0.71 -0.6 4,821,818 + AO356_21525 0.72 +0.6 4,821,960 + -1.1 4,821,988 + +0.1 4,822,027 + +0.1 4,822,027 + +0.4 4,822,027 + +1.5 4,822,027 + -0.2 4,822,028 - +1.9 4,822,033 + +0.0 4,822,034 - -0.6 4,822,036 - -0.8 4,822,112 + AO356_21530 0.12 +0.2 4,822,113 - AO356_21530 0.13 +0.9 4,822,141 + AO356_21530 0.16 -0.6 4,822,141 + AO356_21530 0.16 +1.2 4,822,144 + AO356_21530 0.17 -0.1 4,822,144 + AO356_21530 0.17 -0.1 4,822,145 - AO356_21530 0.17 -0.4 4,822,145 - AO356_21530 0.17 -0.1 4,822,145 - AO356_21530 0.17 -0.1 4,822,145 - AO356_21530 0.17 +0.7 4,822,145 - AO356_21530 0.17 +0.1 4,822,148 + AO356_21530 0.17 +0.2 4,822,148 + AO356_21530 0.17 +0.3 4,822,148 + AO356_21530 0.17 -1.1 4,822,148 + AO356_21530 0.17 +0.7 4,822,148 + AO356_21530 0.17 -0.8 4,822,148 + AO356_21530 0.17 -1.5 4,822,148 + AO356_21530 0.17 -0.4 4,822,148 + AO356_21530 0.17 -0.5 4,822,148 + AO356_21530 0.17 +0.2 4,822,149 - AO356_21530 0.17 -0.1 4,822,149 - AO356_21530 0.17 +0.1 4,822,149 - AO356_21530 0.17 -0.4 4,822,149 - AO356_21530 0.17 -1.0 4,822,149 - AO356_21530 0.17 +1.6 4,822,149 - AO356_21530 0.17 -1.7 4,822,149 - AO356_21530 0.17 -1.3 4,822,149 - AO356_21530 0.17 -0.7 4,822,149 - AO356_21530 0.17 -0.7 4,822,149 - AO356_21530 0.17 -1.5 4,822,149 - AO356_21530 0.17 -0.2 4,822,149 - AO356_21530 0.17 +1.4 4,822,200 + AO356_21530 0.24 +0.0 4,822,202 + AO356_21530 0.25 -1.1 4,822,202 + AO356_21530 0.25 -0.8 4,822,203 - AO356_21530 0.25 +0.1 4,822,203 - AO356_21530 0.25 -0.3 4,822,334 + AO356_21530 0.43 +0.5 4,822,335 - AO356_21530 0.43 -1.1 4,822,484 - AO356_21530 0.63 +0.4 4,822,597 + AO356_21530 0.79 -1.1 4,822,598 - AO356_21530 0.79 -0.8 4,822,598 - AO356_21530 0.79 -0.2 4,822,598 - AO356_21530 0.79 +0.6 4,822,677 + AO356_21530 0.90 +0.1 4,822,677 + AO356_21530 0.90 -1.2 4,822,678 - AO356_21530 0.90 +0.5 4,822,678 - AO356_21530 0.90 +0.4 4,822,678 - AO356_21530 0.90 +0.3 4,822,678 - AO356_21530 0.90 -0.1 4,822,678 - AO356_21530 0.90 +0.1 4,822,738 + -0.9 4,822,738 + -0.3 4,822,784 + -0.1 4,822,785 - +0.4 4,822,785 - +0.6 4,822,787 - +1.1 4,823,023 + -0.6 4,823,023 + -0.4 4,823,023 + +1.9 4,823,023 + -0.6 4,823,023 + +0.3 4,823,023 + +0.5 4,823,044 + +1.5 4,823,044 + +0.7 4,823,044 + +0.3 4,823,045 - -1.4 4,823,096 + -0.7 4,823,096 + -0.2 4,823,096 + -1.0 4,823,097 - -0.1 4,823,097 - +1.1 4,823,100 + +0.3 4,823,101 - +0.2 4,823,154 + -1.0 4,823,477 + +0.1 4,823,477 + -0.5 4,823,478 - +0.6 4,823,478 - +0.5 4,823,618 - AO356_21540 0.19 +0.1 4,823,632 + AO356_21540 0.22 -1.6 4,823,632 + AO356_21540 0.22 -1.2 4,823,641 - AO356_21540 0.24 +0.4 4,823,641 - AO356_21540 0.24 +1.1
Or see this region's nucleotide sequence