Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_13330 and AO356_13340 are separated by 343 nucleotides AO356_13340 and AO356_13345 overlap by 4 nucleotides AO356_13345 and AO356_13350 overlap by 4 nucleotides
AO356_13330: AO356_13330 - peptidase M16, at 3,029,783 to 3,031,138
_13330
AO356_13340: AO356_13340 - signal recognition particle-docking protein FtsY, at 3,031,482 to 3,032,915
_13340
AO356_13345: AO356_13345 - cell division ATP-binding protein FtsE, at 3,032,912 to 3,033,583
_13345
AO356_13350: AO356_13350 - cell division protein FtsX, at 3,033,580 to 3,034,602
_13350
Position (kb)
3031
3032
3033 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3030.516 kb on + strand, within AO356_13330 at 3030.516 kb on + strand, within AO356_13330 at 3030.516 kb on + strand, within AO356_13330 at 3030.516 kb on + strand, within AO356_13330 at 3030.528 kb on + strand, within AO356_13330 at 3030.528 kb on + strand, within AO356_13330 at 3030.528 kb on + strand, within AO356_13330 at 3030.529 kb on - strand, within AO356_13330 at 3030.529 kb on - strand, within AO356_13330 at 3030.529 kb on - strand, within AO356_13330 at 3030.529 kb on - strand, within AO356_13330 at 3030.636 kb on + strand, within AO356_13330 at 3030.637 kb on - strand, within AO356_13330 at 3030.795 kb on + strand, within AO356_13330 at 3030.795 kb on + strand, within AO356_13330 at 3030.795 kb on + strand, within AO356_13330 at 3030.796 kb on - strand, within AO356_13330 at 3030.798 kb on + strand, within AO356_13330 at 3030.798 kb on + strand, within AO356_13330 at 3030.799 kb on - strand, within AO356_13330 at 3030.799 kb on - strand, within AO356_13330 at 3030.799 kb on - strand, within AO356_13330 at 3030.948 kb on + strand, within AO356_13330 at 3030.949 kb on - strand, within AO356_13330 at 3030.966 kb on + strand, within AO356_13330 at 3030.966 kb on + strand, within AO356_13330 at 3030.967 kb on - strand, within AO356_13330 at 3030.967 kb on - strand, within AO356_13330 at 3030.967 kb on - strand, within AO356_13330 at 3031.146 kb on + strand at 3031.147 kb on - strand at 3031.167 kb on + strand at 3031.167 kb on + strand at 3031.167 kb on + strand at 3031.168 kb on - strand at 3031.168 kb on - strand at 3031.168 kb on - strand at 3031.168 kb on - strand at 3031.168 kb on - strand at 3031.168 kb on - strand at 3031.168 kb on - strand at 3031.174 kb on + strand at 3031.198 kb on + strand at 3031.198 kb on + strand at 3031.198 kb on + strand at 3031.198 kb on + strand at 3031.198 kb on + strand at 3031.203 kb on + strand at 3031.244 kb on + strand at 3031.426 kb on + strand at 3031.426 kb on + strand at 3031.426 kb on + strand at 3031.426 kb on + strand at 3031.426 kb on + strand at 3031.426 kb on + strand at 3031.430 kb on + strand at 3032.936 kb on - strand at 3033.137 kb on + strand, within AO356_13345 at 3033.138 kb on - strand, within AO356_13345 at 3033.311 kb on + strand, within AO356_13345 at 3033.777 kb on + strand, within AO356_13350 at 3033.778 kb on - strand, within AO356_13350 at 3033.778 kb on - strand, within AO356_13350 at 3033.778 kb on - strand, within AO356_13350 at 3033.827 kb on + strand, within AO356_13350 at 3033.827 kb on + strand, within AO356_13350 at 3033.837 kb on + strand, within AO356_13350 at 3033.837 kb on + strand, within AO356_13350 at 3033.837 kb on + strand, within AO356_13350 at 3033.838 kb on - strand, within AO356_13350 at 3033.838 kb on - strand, within AO356_13350 at 3033.838 kb on - strand, within AO356_13350 at 3033.889 kb on + strand, within AO356_13350 at 3033.889 kb on + strand, within AO356_13350 at 3033.889 kb on + strand, within AO356_13350 at 3033.890 kb on - strand, within AO356_13350
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 3,030,516 + AO356_13330 0.54 +1.9 3,030,516 + AO356_13330 0.54 -0.1 3,030,516 + AO356_13330 0.54 +0.8 3,030,516 + AO356_13330 0.54 +0.8 3,030,528 + AO356_13330 0.55 +1.6 3,030,528 + AO356_13330 0.55 +0.5 3,030,528 + AO356_13330 0.55 +1.7 3,030,529 - AO356_13330 0.55 +0.4 3,030,529 - AO356_13330 0.55 +1.7 3,030,529 - AO356_13330 0.55 +0.3 3,030,529 - AO356_13330 0.55 +0.2 3,030,636 + AO356_13330 0.63 +1.0 3,030,637 - AO356_13330 0.63 +1.4 3,030,795 + AO356_13330 0.75 +2.1 3,030,795 + AO356_13330 0.75 +1.9 3,030,795 + AO356_13330 0.75 +1.3 3,030,796 - AO356_13330 0.75 -0.1 3,030,798 + AO356_13330 0.75 +1.5 3,030,798 + AO356_13330 0.75 +1.1 3,030,799 - AO356_13330 0.75 -0.6 3,030,799 - AO356_13330 0.75 +0.5 3,030,799 - AO356_13330 0.75 -0.6 3,030,948 + AO356_13330 0.86 +1.8 3,030,949 - AO356_13330 0.86 +0.9 3,030,966 + AO356_13330 0.87 +0.6 3,030,966 + AO356_13330 0.87 +1.5 3,030,967 - AO356_13330 0.87 +1.3 3,030,967 - AO356_13330 0.87 -0.4 3,030,967 - AO356_13330 0.87 -0.4 3,031,146 + +0.2 3,031,147 - -0.9 3,031,167 + +1.0 3,031,167 + +0.5 3,031,167 + +2.7 3,031,168 - -0.8 3,031,168 - +0.1 3,031,168 - +2.4 3,031,168 - -1.4 3,031,168 - -1.6 3,031,168 - +0.1 3,031,168 - -0.5 3,031,174 + +1.4 3,031,198 + +1.2 3,031,198 + +1.5 3,031,198 + +2.3 3,031,198 + +2.2 3,031,198 + +2.4 3,031,203 + +0.8 3,031,244 + +1.2 3,031,426 + +0.7 3,031,426 + +1.6 3,031,426 + +1.3 3,031,426 + +0.4 3,031,426 + +0.4 3,031,426 + +0.1 3,031,430 + +0.1 3,032,936 - -2.4 3,033,137 + AO356_13345 0.33 -2.4 3,033,138 - AO356_13345 0.34 -2.8 3,033,311 + AO356_13345 0.59 -2.1 3,033,777 + AO356_13350 0.19 -3.2 3,033,778 - AO356_13350 0.19 -0.8 3,033,778 - AO356_13350 0.19 -2.0 3,033,778 - AO356_13350 0.19 -0.6 3,033,827 + AO356_13350 0.24 -1.3 3,033,827 + AO356_13350 0.24 -2.6 3,033,837 + AO356_13350 0.25 +0.2 3,033,837 + AO356_13350 0.25 -1.7 3,033,837 + AO356_13350 0.25 -2.8 3,033,838 - AO356_13350 0.25 -1.9 3,033,838 - AO356_13350 0.25 -3.6 3,033,838 - AO356_13350 0.25 -1.8 3,033,889 + AO356_13350 0.30 -2.4 3,033,889 + AO356_13350 0.30 -2.5 3,033,889 + AO356_13350 0.30 -2.4 3,033,890 - AO356_13350 0.30 -2.9
Or see this region's nucleotide sequence