Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_11755 and AO356_11760 overlap by 11 nucleotides AO356_11760 and AO356_11765 are separated by 182 nucleotides AO356_11765 and AO356_11770 are separated by 9 nucleotides
AO356_11755: AO356_11755 - ADP-ribose pyrophosphatase, at 2,662,337 to 2,663,044
_11755
AO356_11760: AO356_11760 - cytidyltransferase, at 2,663,034 to 2,663,591
_11760
AO356_11765: AO356_11765 - amidase, at 2,663,774 to 2,664,421
_11765
AO356_11770: AO356_11770 - nicotinate phosphoribosyltransferase, at 2,664,431 to 2,665,660
_11770
Position (kb)
2663
2664
2665 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2663.014 kb on - strand at 2663.036 kb on - strand at 2663.061 kb on - strand at 2663.066 kb on - strand at 2663.074 kb on + strand at 2663.075 kb on - strand at 2663.075 kb on - strand at 2663.075 kb on - strand at 2663.075 kb on - strand at 2663.075 kb on - strand at 2663.079 kb on + strand at 2663.221 kb on + strand, within AO356_11760 at 2663.222 kb on - strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.320 kb on + strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.321 kb on - strand, within AO356_11760 at 2663.326 kb on + strand, within AO356_11760 at 2663.326 kb on + strand, within AO356_11760 at 2663.326 kb on + strand, within AO356_11760 at 2663.326 kb on + strand, within AO356_11760 at 2663.326 kb on + strand, within AO356_11760 at 2663.326 kb on + strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.327 kb on - strand, within AO356_11760 at 2663.446 kb on + strand, within AO356_11760 at 2663.446 kb on + strand, within AO356_11760 at 2663.446 kb on + strand, within AO356_11760 at 2663.446 kb on + strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2663.447 kb on - strand, within AO356_11760 at 2664.089 kb on + strand, within AO356_11765 at 2664.089 kb on + strand, within AO356_11765 at 2664.090 kb on - strand, within AO356_11765 at 2664.090 kb on - strand, within AO356_11765 at 2664.095 kb on + strand, within AO356_11765 at 2664.096 kb on - strand, within AO356_11765 at 2664.096 kb on - strand, within AO356_11765 at 2664.096 kb on - strand, within AO356_11765 at 2664.096 kb on - strand, within AO356_11765 at 2664.147 kb on - strand, within AO356_11765 at 2664.189 kb on - strand, within AO356_11765 at 2664.189 kb on - strand, within AO356_11765 at 2664.189 kb on - strand, within AO356_11765 at 2664.488 kb on + strand at 2664.488 kb on + strand at 2664.488 kb on + strand at 2664.488 kb on + strand at 2664.488 kb on + strand at 2664.489 kb on - strand at 2664.489 kb on - strand at 2664.489 kb on - strand at 2664.489 kb on - strand at 2664.491 kb on + strand at 2664.491 kb on + strand at 2664.491 kb on + strand at 2664.491 kb on + strand at 2664.491 kb on + strand at 2664.491 kb on + strand at 2664.491 kb on + strand at 2664.491 kb on + strand at 2664.491 kb on + strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.492 kb on - strand at 2664.548 kb on + strand at 2664.548 kb on + strand at 2664.549 kb on - strand at 2664.549 kb on - strand at 2664.737 kb on + strand, within AO356_11770 at 2664.738 kb on - strand, within AO356_11770 at 2664.860 kb on + strand, within AO356_11770 at 2664.860 kb on + strand, within AO356_11770 at 2664.860 kb on + strand, within AO356_11770 at 2664.861 kb on - strand, within AO356_11770 at 2664.861 kb on - strand, within AO356_11770 at 2664.899 kb on + strand, within AO356_11770 at 2664.899 kb on + strand, within AO356_11770 at 2664.899 kb on + strand, within AO356_11770 at 2664.899 kb on + strand, within AO356_11770 at 2664.900 kb on - strand, within AO356_11770 at 2664.900 kb on - strand, within AO356_11770 at 2665.194 kb on - strand, within AO356_11770 at 2665.265 kb on + strand, within AO356_11770 at 2665.265 kb on + strand, within AO356_11770 at 2665.265 kb on + strand, within AO356_11770 at 2665.265 kb on + strand, within AO356_11770 at 2665.265 kb on + strand, within AO356_11770 at 2665.265 kb on + strand, within AO356_11770 at 2665.265 kb on + strand, within AO356_11770 at 2665.265 kb on + strand, within AO356_11770 at 2665.265 kb on + strand, within AO356_11770 at 2665.266 kb on - strand, within AO356_11770 at 2665.266 kb on - strand, within AO356_11770 at 2665.266 kb on - strand, within AO356_11770 at 2665.266 kb on - strand, within AO356_11770 at 2665.266 kb on - strand, within AO356_11770 at 2665.280 kb on + strand, within AO356_11770 at 2665.280 kb on + strand, within AO356_11770 at 2665.280 kb on + strand, within AO356_11770 at 2665.281 kb on - strand, within AO356_11770 at 2665.281 kb on - strand, within AO356_11770 at 2665.369 kb on + strand, within AO356_11770
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 2,663,014 - +1.0 2,663,036 - -0.9 2,663,061 - -0.3 2,663,066 - -0.7 2,663,074 + -1.2 2,663,075 - +0.1 2,663,075 - +0.2 2,663,075 - -1.3 2,663,075 - -0.9 2,663,075 - +0.1 2,663,079 + -0.3 2,663,221 + AO356_11760 0.34 +0.2 2,663,222 - AO356_11760 0.34 -0.5 2,663,320 + AO356_11760 0.51 +0.8 2,663,320 + AO356_11760 0.51 -1.7 2,663,320 + AO356_11760 0.51 -0.7 2,663,320 + AO356_11760 0.51 -0.1 2,663,320 + AO356_11760 0.51 -0.8 2,663,320 + AO356_11760 0.51 -0.4 2,663,320 + AO356_11760 0.51 -1.0 2,663,321 - AO356_11760 0.51 -1.0 2,663,321 - AO356_11760 0.51 -0.4 2,663,321 - AO356_11760 0.51 +0.5 2,663,321 - AO356_11760 0.51 +0.1 2,663,321 - AO356_11760 0.51 +0.2 2,663,321 - AO356_11760 0.51 -0.0 2,663,321 - AO356_11760 0.51 -0.1 2,663,321 - AO356_11760 0.51 -0.5 2,663,321 - AO356_11760 0.51 +0.3 2,663,321 - AO356_11760 0.51 +0.3 2,663,326 + AO356_11760 0.52 +0.5 2,663,326 + AO356_11760 0.52 +0.7 2,663,326 + AO356_11760 0.52 +0.7 2,663,326 + AO356_11760 0.52 -0.1 2,663,326 + AO356_11760 0.52 -0.8 2,663,326 + AO356_11760 0.52 -1.2 2,663,327 - AO356_11760 0.53 -0.9 2,663,327 - AO356_11760 0.53 -0.7 2,663,327 - AO356_11760 0.53 +0.7 2,663,327 - AO356_11760 0.53 -0.3 2,663,327 - AO356_11760 0.53 +0.2 2,663,327 - AO356_11760 0.53 +0.4 2,663,327 - AO356_11760 0.53 +0.0 2,663,446 + AO356_11760 0.74 -0.4 2,663,446 + AO356_11760 0.74 -0.5 2,663,446 + AO356_11760 0.74 -0.1 2,663,446 + AO356_11760 0.74 -1.2 2,663,447 - AO356_11760 0.74 -0.2 2,663,447 - AO356_11760 0.74 -2.8 2,663,447 - AO356_11760 0.74 +0.5 2,663,447 - AO356_11760 0.74 -1.5 2,663,447 - AO356_11760 0.74 -1.4 2,663,447 - AO356_11760 0.74 -0.2 2,663,447 - AO356_11760 0.74 +0.3 2,663,447 - AO356_11760 0.74 +1.2 2,664,089 + AO356_11765 0.49 +0.2 2,664,089 + AO356_11765 0.49 +0.9 2,664,090 - AO356_11765 0.49 -0.0 2,664,090 - AO356_11765 0.49 -0.4 2,664,095 + AO356_11765 0.50 -0.5 2,664,096 - AO356_11765 0.50 -0.2 2,664,096 - AO356_11765 0.50 +0.2 2,664,096 - AO356_11765 0.50 +0.3 2,664,096 - AO356_11765 0.50 +0.2 2,664,147 - AO356_11765 0.58 -0.2 2,664,189 - AO356_11765 0.64 +0.2 2,664,189 - AO356_11765 0.64 -0.1 2,664,189 - AO356_11765 0.64 -0.7 2,664,488 + +0.7 2,664,488 + +0.1 2,664,488 + +0.0 2,664,488 + +0.1 2,664,488 + +0.3 2,664,489 - -1.0 2,664,489 - +0.2 2,664,489 - -0.5 2,664,489 - -0.3 2,664,491 + -0.5 2,664,491 + +0.7 2,664,491 + -0.5 2,664,491 + -0.5 2,664,491 + -0.5 2,664,491 + -1.0 2,664,491 + -0.1 2,664,491 + +0.3 2,664,491 + +0.1 2,664,492 - -0.1 2,664,492 - -0.8 2,664,492 - +1.0 2,664,492 - +1.8 2,664,492 - -0.0 2,664,492 - +0.4 2,664,492 - +0.5 2,664,492 - +0.3 2,664,492 - -0.1 2,664,492 - -0.5 2,664,492 - -1.1 2,664,492 - -0.7 2,664,492 - -1.1 2,664,492 - -0.4 2,664,492 - -0.6 2,664,492 - +0.5 2,664,492 - -0.8 2,664,548 + -0.1 2,664,548 + +0.9 2,664,549 - -0.0 2,664,549 - +0.5 2,664,737 + AO356_11770 0.25 -0.7 2,664,738 - AO356_11770 0.25 -0.1 2,664,860 + AO356_11770 0.35 +0.8 2,664,860 + AO356_11770 0.35 -0.2 2,664,860 + AO356_11770 0.35 +0.9 2,664,861 - AO356_11770 0.35 +0.2 2,664,861 - AO356_11770 0.35 -0.3 2,664,899 + AO356_11770 0.38 +0.0 2,664,899 + AO356_11770 0.38 -0.5 2,664,899 + AO356_11770 0.38 +1.2 2,664,899 + AO356_11770 0.38 -0.2 2,664,900 - AO356_11770 0.38 +1.3 2,664,900 - AO356_11770 0.38 -0.2 2,665,194 - AO356_11770 0.62 -1.5 2,665,265 + AO356_11770 0.68 -1.0 2,665,265 + AO356_11770 0.68 +1.3 2,665,265 + AO356_11770 0.68 +0.4 2,665,265 + AO356_11770 0.68 -0.1 2,665,265 + AO356_11770 0.68 -0.8 2,665,265 + AO356_11770 0.68 +0.5 2,665,265 + AO356_11770 0.68 -0.2 2,665,265 + AO356_11770 0.68 -0.0 2,665,265 + AO356_11770 0.68 +0.5 2,665,266 - AO356_11770 0.68 +0.5 2,665,266 - AO356_11770 0.68 +1.1 2,665,266 - AO356_11770 0.68 +0.4 2,665,266 - AO356_11770 0.68 +0.2 2,665,266 - AO356_11770 0.68 +0.7 2,665,280 + AO356_11770 0.69 +0.8 2,665,280 + AO356_11770 0.69 +1.0 2,665,280 + AO356_11770 0.69 -0.3 2,665,281 - AO356_11770 0.69 +0.3 2,665,281 - AO356_11770 0.69 +0.6 2,665,369 + AO356_11770 0.76 -0.3
Or see this region's nucleotide sequence