Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09000 and AO356_09005 are separated by 268 nucleotides AO356_09005 and AO356_09010 are separated by 72 nucleotides
AO356_09000: AO356_09000 - type IV secretion protein Rhs, at 2,034,029 to 2,036,086
_09000
AO356_09005: AO356_09005 - hypothetical protein, at 2,036,355 to 2,036,852
_09005
AO356_09010: AO356_09010 - proline:sodium symporter PutP, at 2,036,925 to 2,038,409
_09010
Position (kb)
2036
2037 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2035.416 kb on - strand, within AO356_09000 at 2035.498 kb on - strand, within AO356_09000 at 2035.498 kb on - strand, within AO356_09000 at 2035.641 kb on + strand, within AO356_09000 at 2035.641 kb on + strand, within AO356_09000 at 2035.642 kb on - strand, within AO356_09000 at 2035.653 kb on + strand, within AO356_09000 at 2035.653 kb on + strand, within AO356_09000 at 2035.653 kb on + strand, within AO356_09000 at 2035.653 kb on + strand, within AO356_09000 at 2035.653 kb on + strand, within AO356_09000 at 2035.653 kb on + strand, within AO356_09000 at 2035.653 kb on + strand, within AO356_09000 at 2035.654 kb on - strand, within AO356_09000 at 2035.654 kb on - strand, within AO356_09000 at 2035.654 kb on - strand, within AO356_09000 at 2035.791 kb on + strand, within AO356_09000 at 2035.792 kb on - strand, within AO356_09000 at 2035.863 kb on + strand, within AO356_09000 at 2035.863 kb on + strand, within AO356_09000 at 2035.863 kb on + strand, within AO356_09000 at 2035.863 kb on + strand, within AO356_09000 at 2035.863 kb on + strand, within AO356_09000 at 2035.864 kb on - strand, within AO356_09000 at 2035.938 kb on - strand at 2035.981 kb on - strand at 2036.133 kb on + strand at 2036.144 kb on + strand at 2036.145 kb on - strand at 2036.145 kb on - strand at 2036.145 kb on - strand at 2036.145 kb on - strand at 2036.188 kb on + strand at 2036.188 kb on + strand at 2036.189 kb on - strand at 2036.189 kb on - strand at 2036.189 kb on - strand at 2036.189 kb on - strand at 2036.189 kb on - strand at 2036.220 kb on - strand at 2036.256 kb on + strand at 2036.256 kb on + strand at 2036.256 kb on + strand at 2036.256 kb on + strand at 2036.256 kb on + strand at 2036.257 kb on - strand at 2036.257 kb on - strand at 2036.367 kb on + strand at 2036.419 kb on + strand, within AO356_09005 at 2036.419 kb on + strand, within AO356_09005 at 2036.420 kb on - strand, within AO356_09005 at 2036.477 kb on + strand, within AO356_09005 at 2036.478 kb on - strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.790 kb on + strand, within AO356_09005 at 2036.791 kb on - strand, within AO356_09005 at 2036.791 kb on - strand, within AO356_09005 at 2036.791 kb on - strand, within AO356_09005 at 2036.791 kb on - strand, within AO356_09005 at 2036.791 kb on - strand, within AO356_09005 at 2036.850 kb on + strand at 2036.851 kb on - strand at 2036.851 kb on - strand at 2036.926 kb on + strand at 2036.926 kb on + strand at 2036.976 kb on - strand at 2036.976 kb on - strand at 2037.010 kb on + strand at 2037.010 kb on + strand at 2037.011 kb on - strand at 2037.011 kb on - strand at 2037.011 kb on - strand at 2037.053 kb on - strand at 2037.053 kb on - strand at 2037.203 kb on - strand, within AO356_09010 at 2037.338 kb on - strand, within AO356_09010 at 2037.423 kb on + strand, within AO356_09010 at 2037.423 kb on + strand, within AO356_09010 at 2037.423 kb on + strand, within AO356_09010 at 2037.423 kb on + strand, within AO356_09010 at 2037.423 kb on + strand, within AO356_09010 at 2037.424 kb on - strand, within AO356_09010 at 2037.424 kb on - strand, within AO356_09010 at 2037.424 kb on - strand, within AO356_09010 at 2037.526 kb on + strand, within AO356_09010 at 2037.526 kb on + strand, within AO356_09010 at 2037.526 kb on + strand, within AO356_09010 at 2037.527 kb on - strand, within AO356_09010 at 2037.527 kb on - strand, within AO356_09010 at 2037.667 kb on + strand, within AO356_09010 at 2037.668 kb on - strand, within AO356_09010 at 2037.668 kb on - strand, within AO356_09010 at 2037.668 kb on - strand, within AO356_09010
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 2,035,416 - AO356_09000 0.67 +0.1 2,035,498 - AO356_09000 0.71 -0.4 2,035,498 - AO356_09000 0.71 -0.3 2,035,641 + AO356_09000 0.78 -0.3 2,035,641 + AO356_09000 0.78 +0.4 2,035,642 - AO356_09000 0.78 -0.6 2,035,653 + AO356_09000 0.79 -0.5 2,035,653 + AO356_09000 0.79 -0.5 2,035,653 + AO356_09000 0.79 +0.8 2,035,653 + AO356_09000 0.79 -1.3 2,035,653 + AO356_09000 0.79 -1.8 2,035,653 + AO356_09000 0.79 -0.7 2,035,653 + AO356_09000 0.79 +0.3 2,035,654 - AO356_09000 0.79 +1.2 2,035,654 - AO356_09000 0.79 +0.9 2,035,654 - AO356_09000 0.79 +0.4 2,035,791 + AO356_09000 0.86 -0.1 2,035,792 - AO356_09000 0.86 +0.3 2,035,863 + AO356_09000 0.89 +0.1 2,035,863 + AO356_09000 0.89 +0.2 2,035,863 + AO356_09000 0.89 -1.6 2,035,863 + AO356_09000 0.89 +0.5 2,035,863 + AO356_09000 0.89 +0.0 2,035,864 - AO356_09000 0.89 +0.2 2,035,938 - +0.1 2,035,981 - +0.6 2,036,133 + -0.3 2,036,144 + +0.2 2,036,145 - -0.0 2,036,145 - +0.3 2,036,145 - +0.4 2,036,145 - -1.6 2,036,188 + +2.4 2,036,188 + -0.2 2,036,189 - +1.4 2,036,189 - +0.2 2,036,189 - -0.8 2,036,189 - +0.5 2,036,189 - +0.8 2,036,220 - +0.3 2,036,256 + +0.6 2,036,256 + +0.2 2,036,256 + +1.0 2,036,256 + +0.0 2,036,256 + -0.4 2,036,257 - +0.2 2,036,257 - -0.4 2,036,367 + +0.5 2,036,419 + AO356_09005 0.13 +0.1 2,036,419 + AO356_09005 0.13 +1.2 2,036,420 - AO356_09005 0.13 +0.2 2,036,477 + AO356_09005 0.24 +0.2 2,036,478 - AO356_09005 0.25 +1.2 2,036,790 + AO356_09005 0.87 -0.3 2,036,790 + AO356_09005 0.87 -0.0 2,036,790 + AO356_09005 0.87 +1.6 2,036,790 + AO356_09005 0.87 -0.8 2,036,790 + AO356_09005 0.87 -0.1 2,036,790 + AO356_09005 0.87 -0.2 2,036,790 + AO356_09005 0.87 +1.2 2,036,790 + AO356_09005 0.87 +0.5 2,036,790 + AO356_09005 0.87 +0.8 2,036,790 + AO356_09005 0.87 -0.6 2,036,790 + AO356_09005 0.87 +0.9 2,036,790 + AO356_09005 0.87 -0.3 2,036,790 + AO356_09005 0.87 +0.2 2,036,790 + AO356_09005 0.87 -0.3 2,036,790 + AO356_09005 0.87 -0.1 2,036,791 - AO356_09005 0.88 +0.9 2,036,791 - AO356_09005 0.88 -0.8 2,036,791 - AO356_09005 0.88 +0.0 2,036,791 - AO356_09005 0.88 +0.5 2,036,791 - AO356_09005 0.88 +0.7 2,036,850 + +0.0 2,036,851 - +0.8 2,036,851 - -0.1 2,036,926 + +0.6 2,036,926 + -0.6 2,036,976 - -1.5 2,036,976 - +0.7 2,037,010 + -0.4 2,037,010 + +0.5 2,037,011 - +0.5 2,037,011 - +0.9 2,037,011 - +0.6 2,037,053 - +0.8 2,037,053 - +0.4 2,037,203 - AO356_09010 0.19 -0.1 2,037,338 - AO356_09010 0.28 +0.5 2,037,423 + AO356_09010 0.34 +0.0 2,037,423 + AO356_09010 0.34 +0.4 2,037,423 + AO356_09010 0.34 -0.8 2,037,423 + AO356_09010 0.34 +0.9 2,037,423 + AO356_09010 0.34 +0.7 2,037,424 - AO356_09010 0.34 +0.2 2,037,424 - AO356_09010 0.34 -0.0 2,037,424 - AO356_09010 0.34 -0.2 2,037,526 + AO356_09010 0.40 -0.0 2,037,526 + AO356_09010 0.40 +0.4 2,037,526 + AO356_09010 0.40 +0.7 2,037,527 - AO356_09010 0.41 -0.5 2,037,527 - AO356_09010 0.41 +1.2 2,037,667 + AO356_09010 0.50 -0.8 2,037,668 - AO356_09010 0.50 -0.4 2,037,668 - AO356_09010 0.50 -0.2 2,037,668 - AO356_09010 0.50 +0.3
Or see this region's nucleotide sequence