Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05730 and AO356_05735 overlap by 1 nucleotides AO356_05735 and AO356_05740 are separated by 254 nucleotides AO356_05740 and AO356_05745 are separated by 3 nucleotides
AO356_05730: AO356_05730 - hypothetical protein, at 1,276,425 to 1,276,823
_05730
AO356_05735: AO356_05735 - hypothetical protein, at 1,276,823 to 1,277,332
_05735
AO356_05740: AO356_05740 - baseplate protein, at 1,277,587 to 1,278,627
_05740
AO356_05745: AO356_05745 - hydroxyacid dehydrogenase, at 1,278,631 to 1,279,869
_05745
Position (kb) 1277
1278
1279 Strain fitness (log2 ratio) -1
0
1
2 at 1276.868 kb on + strand at 1276.868 kb on + strand at 1276.869 kb on - strand at 1277.061 kb on + strand, within AO356_05735 at 1277.324 kb on + strand at 1277.325 kb on - strand at 1277.623 kb on - strand at 1277.623 kb on - strand at 1277.675 kb on + strand at 1277.675 kb on + strand at 1277.675 kb on + strand at 1277.675 kb on + strand at 1277.675 kb on + strand at 1277.735 kb on - strand, within AO356_05740 at 1277.792 kb on + strand, within AO356_05740 at 1277.792 kb on + strand, within AO356_05740 at 1277.792 kb on + strand, within AO356_05740 at 1277.792 kb on + strand, within AO356_05740 at 1277.793 kb on - strand, within AO356_05740 at 1277.793 kb on - strand, within AO356_05740 at 1277.996 kb on + strand, within AO356_05740 at 1278.018 kb on - strand, within AO356_05740 at 1278.018 kb on - strand, within AO356_05740 at 1278.018 kb on - strand, within AO356_05740 at 1278.064 kb on + strand, within AO356_05740 at 1278.064 kb on + strand, within AO356_05740 at 1278.064 kb on + strand, within AO356_05740 at 1278.065 kb on - strand, within AO356_05740 at 1278.065 kb on - strand, within AO356_05740 at 1278.065 kb on - strand, within AO356_05740 at 1278.065 kb on - strand, within AO356_05740 at 1278.065 kb on - strand, within AO356_05740 at 1278.065 kb on - strand, within AO356_05740 at 1278.390 kb on - strand, within AO356_05740 at 1278.390 kb on - strand, within AO356_05740 at 1278.390 kb on - strand, within AO356_05740 at 1278.390 kb on - strand, within AO356_05740 at 1278.413 kb on + strand, within AO356_05740 at 1278.414 kb on - strand, within AO356_05740 at 1278.414 kb on - strand, within AO356_05740 at 1278.598 kb on - strand at 1278.598 kb on - strand at 1278.598 kb on - strand at 1278.598 kb on - strand at 1278.633 kb on - strand at 1278.691 kb on - strand at 1278.737 kb on + strand at 1278.738 kb on - strand at 1278.858 kb on - strand, within AO356_05745 at 1279.307 kb on + strand, within AO356_05745 at 1279.349 kb on + strand, within AO356_05745 at 1279.349 kb on + strand, within AO356_05745 at 1279.349 kb on + strand, within AO356_05745 at 1279.350 kb on - strand, within AO356_05745 at 1279.350 kb on - strand, within AO356_05745
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 1,276,868 + +0.0 1,276,868 + +0.7 1,276,869 - +0.2 1,277,061 + AO356_05735 0.47 -1.1 1,277,324 + -0.1 1,277,325 - +0.6 1,277,623 - +0.9 1,277,623 - +1.8 1,277,675 + -0.5 1,277,675 + -0.8 1,277,675 + -0.4 1,277,675 + -0.1 1,277,675 + +0.5 1,277,735 - AO356_05740 0.14 -0.2 1,277,792 + AO356_05740 0.20 +2.1 1,277,792 + AO356_05740 0.20 -0.3 1,277,792 + AO356_05740 0.20 +0.2 1,277,792 + AO356_05740 0.20 +0.9 1,277,793 - AO356_05740 0.20 +1.2 1,277,793 - AO356_05740 0.20 -0.0 1,277,996 + AO356_05740 0.39 +0.4 1,278,018 - AO356_05740 0.41 +0.6 1,278,018 - AO356_05740 0.41 -0.1 1,278,018 - AO356_05740 0.41 +0.0 1,278,064 + AO356_05740 0.46 +0.7 1,278,064 + AO356_05740 0.46 -0.1 1,278,064 + AO356_05740 0.46 -1.2 1,278,065 - AO356_05740 0.46 -1.7 1,278,065 - AO356_05740 0.46 +0.8 1,278,065 - AO356_05740 0.46 -0.8 1,278,065 - AO356_05740 0.46 +0.5 1,278,065 - AO356_05740 0.46 -0.4 1,278,065 - AO356_05740 0.46 +0.3 1,278,390 - AO356_05740 0.77 +0.6 1,278,390 - AO356_05740 0.77 +0.0 1,278,390 - AO356_05740 0.77 +0.5 1,278,390 - AO356_05740 0.77 -0.5 1,278,413 + AO356_05740 0.79 +0.7 1,278,414 - AO356_05740 0.79 +0.2 1,278,414 - AO356_05740 0.79 +0.6 1,278,598 - +0.8 1,278,598 - +0.7 1,278,598 - -1.4 1,278,598 - +0.2 1,278,633 - -1.1 1,278,691 - +0.0 1,278,737 + +0.1 1,278,738 - -1.2 1,278,858 - AO356_05745 0.18 -0.2 1,279,307 + AO356_05745 0.55 -0.5 1,279,349 + AO356_05745 0.58 +0.8 1,279,349 + AO356_05745 0.58 -0.6 1,279,349 + AO356_05745 0.58 +0.3 1,279,350 - AO356_05745 0.58 -0.6 1,279,350 - AO356_05745 0.58 -1.7
Or see this region's nucleotide sequence