Experiment: Benzalkonium Chloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02195 and AO356_02200 are separated by 109 nucleotides AO356_02200 and AO356_02205 are separated by 184 nucleotides AO356_02205 and AO356_02210 are separated by 61 nucleotides AO356_02210 and AO356_02215 are separated by 152 nucleotides
AO356_02195: AO356_02195 - phosphatase, at 472,312 to 472,932
_02195
AO356_02200: AO356_02200 - chromosome partitioning protein ParA, at 473,042 to 473,305
_02200
AO356_02205: AO356_02205 - NADPH-dependent 7-cyano-7-deazaguanine reductase, at 473,490 to 474,320
_02205
AO356_02210: AO356_02210 - copper-binding protein, at 474,382 to 474,903
_02210
AO356_02215: AO356_02215 - transcriptional regulator, at 475,056 to 475,736
_02215
Position (kb) 473
474
475 Strain fitness (log2 ratio) -1
0
1
2 at 472.491 kb on + strand, within AO356_02195 at 472.595 kb on - strand, within AO356_02195 at 472.718 kb on + strand, within AO356_02195 at 472.718 kb on + strand, within AO356_02195 at 472.719 kb on - strand, within AO356_02195 at 472.915 kb on - strand at 472.915 kb on - strand at 472.965 kb on - strand at 472.965 kb on - strand at 472.965 kb on - strand at 472.970 kb on + strand at 472.970 kb on + strand at 473.021 kb on - strand at 473.027 kb on - strand at 473.035 kb on + strand at 473.331 kb on + strand at 473.331 kb on + strand at 473.331 kb on + strand at 473.331 kb on + strand at 473.332 kb on - strand at 473.332 kb on - strand at 473.332 kb on - strand at 473.335 kb on + strand at 473.336 kb on - strand at 473.336 kb on - strand at 473.336 kb on - strand at 473.336 kb on - strand at 473.348 kb on + strand at 473.349 kb on - strand at 473.407 kb on + strand at 473.407 kb on + strand at 473.408 kb on - strand at 473.408 kb on - strand at 473.408 kb on - strand at 473.491 kb on + strand at 473.491 kb on + strand at 473.571 kb on + strand at 473.571 kb on + strand at 473.571 kb on + strand at 473.571 kb on + strand at 473.572 kb on - strand at 473.572 kb on - strand at 473.572 kb on - strand at 473.584 kb on + strand, within AO356_02205 at 473.584 kb on + strand, within AO356_02205 at 473.686 kb on + strand, within AO356_02205 at 473.687 kb on - strand, within AO356_02205 at 473.687 kb on - strand, within AO356_02205 at 473.857 kb on + strand, within AO356_02205 at 474.262 kb on + strand at 474.263 kb on - strand at 474.263 kb on - strand at 474.275 kb on - strand at 474.275 kb on - strand at 474.353 kb on + strand at 474.354 kb on - strand at 474.354 kb on - strand at 474.436 kb on - strand, within AO356_02210 at 474.436 kb on - strand, within AO356_02210 at 474.693 kb on + strand, within AO356_02210 at 474.732 kb on + strand, within AO356_02210 at 474.909 kb on + strand at 474.978 kb on + strand at 475.019 kb on + strand at 475.019 kb on + strand at 475.019 kb on + strand at 475.019 kb on + strand at 475.020 kb on - strand at 475.020 kb on - strand at 475.021 kb on + strand at 475.021 kb on + strand at 475.022 kb on - strand at 475.098 kb on + strand at 475.098 kb on + strand at 475.099 kb on - strand at 475.099 kb on - strand at 475.188 kb on + strand, within AO356_02215 at 475.188 kb on + strand, within AO356_02215 at 475.189 kb on - strand, within AO356_02215
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.008 mg/ml remove 472,491 + AO356_02195 0.29 +1.8 472,595 - AO356_02195 0.46 +1.0 472,718 + AO356_02195 0.65 +0.6 472,718 + AO356_02195 0.65 -0.6 472,719 - AO356_02195 0.66 -0.7 472,915 - +0.3 472,915 - -0.9 472,965 - +0.6 472,965 - -0.1 472,965 - +0.1 472,970 + +0.2 472,970 + -1.3 473,021 - +0.5 473,027 - +0.1 473,035 + +0.3 473,331 + +0.7 473,331 + +0.1 473,331 + -0.1 473,331 + -0.1 473,332 - +0.4 473,332 - -0.1 473,332 - +1.2 473,335 + +0.2 473,336 - +0.1 473,336 - -0.5 473,336 - +0.4 473,336 - -0.4 473,348 + -0.0 473,349 - -0.4 473,407 + -0.4 473,407 + +1.2 473,408 - +0.5 473,408 - +0.1 473,408 - +0.5 473,491 + -0.5 473,491 + +0.5 473,571 + -0.6 473,571 + -1.1 473,571 + -0.5 473,571 + -0.6 473,572 - +0.2 473,572 - -0.6 473,572 - +0.3 473,584 + AO356_02205 0.11 +0.5 473,584 + AO356_02205 0.11 +1.0 473,686 + AO356_02205 0.24 -0.6 473,687 - AO356_02205 0.24 +0.6 473,687 - AO356_02205 0.24 +0.1 473,857 + AO356_02205 0.44 -0.7 474,262 + -0.3 474,263 - -0.9 474,263 - -1.6 474,275 - -1.5 474,275 - +0.4 474,353 + -0.2 474,354 - +0.2 474,354 - -0.3 474,436 - AO356_02210 0.10 +0.4 474,436 - AO356_02210 0.10 -0.2 474,693 + AO356_02210 0.60 -0.2 474,732 + AO356_02210 0.67 +0.1 474,909 + -0.9 474,978 + +0.4 475,019 + -0.8 475,019 + +0.8 475,019 + +0.4 475,019 + -0.5 475,020 - +0.2 475,020 - +0.4 475,021 + -0.2 475,021 + +0.2 475,022 - -0.3 475,098 + +0.6 475,098 + -1.2 475,099 - +0.3 475,099 - +0.6 475,188 + AO356_02215 0.19 +2.4 475,188 + AO356_02215 0.19 +0.4 475,189 - AO356_02215 0.20 +0.1
Or see this region's nucleotide sequence