Experiment: MoYLS4 with Neomycin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0778 and DvMF_0779 overlap by 1 nucleotides DvMF_0779 and DvMF_0780 are separated by 170 nucleotides
DvMF_0778: DvMF_0778 - MCP methyltransferase, CheR-type (RefSeq), at 933,286 to 934,164
_0778
DvMF_0779: DvMF_0779 - PBS lyase HEAT domain protein repeat-containing protein (RefSeq), at 934,164 to 936,089
_0779
DvMF_0780: DvMF_0780 - response regulator receiver modulated CheB methylesterase (RefSeq), at 936,260 to 937,402
_0780
Position (kb) 934
935
936
937 Strain fitness (log2 ratio) -1
0
1 at 933.272 kb on - strand at 933.571 kb on - strand, within DvMF_0778 at 933.622 kb on + strand, within DvMF_0778 at 933.842 kb on - strand, within DvMF_0778 at 934.711 kb on - strand, within DvMF_0779 at 934.755 kb on - strand, within DvMF_0779 at 934.843 kb on + strand, within DvMF_0779 at 935.021 kb on - strand, within DvMF_0779 at 935.081 kb on + strand, within DvMF_0779 at 935.437 kb on + strand, within DvMF_0779 at 935.445 kb on - strand, within DvMF_0779 at 935.509 kb on + strand, within DvMF_0779 at 935.517 kb on - strand, within DvMF_0779 at 935.607 kb on - strand, within DvMF_0779 at 935.639 kb on - strand, within DvMF_0779 at 935.675 kb on + strand, within DvMF_0779 at 935.703 kb on - strand, within DvMF_0779 at 936.325 kb on + strand at 936.342 kb on + strand at 936.485 kb on - strand, within DvMF_0780 at 936.519 kb on + strand, within DvMF_0780 at 936.519 kb on + strand, within DvMF_0780 at 936.527 kb on - strand, within DvMF_0780 at 936.722 kb on - strand, within DvMF_0780 at 936.725 kb on - strand, within DvMF_0780 at 936.863 kb on - strand, within DvMF_0780 at 937.082 kb on - strand, within DvMF_0780
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Neomycin 0.125 mg/ml remove 933,272 - -0.5 933,571 - DvMF_0778 0.32 +1.0 933,622 + DvMF_0778 0.38 +0.3 933,842 - DvMF_0778 0.63 +1.0 934,711 - DvMF_0779 0.28 -0.1 934,755 - DvMF_0779 0.31 +0.7 934,843 + DvMF_0779 0.35 -0.7 935,021 - DvMF_0779 0.44 +0.8 935,081 + DvMF_0779 0.48 +0.9 935,437 + DvMF_0779 0.66 +0.0 935,445 - DvMF_0779 0.67 -0.1 935,509 + DvMF_0779 0.70 -0.7 935,517 - DvMF_0779 0.70 -0.3 935,607 - DvMF_0779 0.75 +0.2 935,639 - DvMF_0779 0.77 +0.1 935,675 + DvMF_0779 0.78 -0.1 935,703 - DvMF_0779 0.80 -0.0 936,325 + +0.3 936,342 + -0.2 936,485 - DvMF_0780 0.20 +0.4 936,519 + DvMF_0780 0.23 +0.6 936,519 + DvMF_0780 0.23 -0.2 936,527 - DvMF_0780 0.23 +1.3 936,722 - DvMF_0780 0.40 -0.2 936,725 - DvMF_0780 0.41 +0.4 936,863 - DvMF_0780 0.53 +0.5 937,082 - DvMF_0780 0.72 -0.3
Or see this region's nucleotide sequence