Experiment: BHIS with Benzethonium chloride 0.002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT3638 and BT3639 overlap by 1 nucleotides BT3639 and BT3640 are separated by 9 nucleotides BT3640 and BT3641 are separated by 202 nucleotides
BT3638: BT3638 - Na+/H+ anti-porter (NCBI ptt file), at 4,714,360 to 4,716,495
BT3638
BT3639: BT3639 - ThiF family protein, putative dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis (NCBI ptt file), at 4,716,495 to 4,717,211
BT3639
BT3640: BT3640 - lipoprotein releasing system ATP-binding protein (NCBI ptt file), at 4,717,221 to 4,717,877
BT3640
BT3641: BT3641 - conserved hypothetical protein (NCBI ptt file), at 4,718,080 to 4,719,009
BT3641
Position (kb)
4716
4717
4718 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4715.718 kb on + strand, within BT3638 at 4715.727 kb on + strand, within BT3638 at 4715.727 kb on + strand, within BT3638 at 4715.727 kb on + strand, within BT3638 at 4715.855 kb on + strand, within BT3638 at 4715.859 kb on + strand, within BT3638 at 4715.880 kb on + strand, within BT3638 at 4716.009 kb on + strand, within BT3638 at 4716.253 kb on + strand, within BT3638 at 4716.253 kb on + strand, within BT3638 at 4716.574 kb on + strand, within BT3639 at 4716.655 kb on + strand, within BT3639 at 4716.917 kb on + strand, within BT3639 at 4716.996 kb on + strand, within BT3639 at 4717.157 kb on + strand at 4717.199 kb on + strand at 4717.217 kb on + strand at 4717.947 kb on - strand at 4717.950 kb on + strand at 4717.955 kb on - strand at 4717.973 kb on - strand at 4717.973 kb on - strand at 4718.060 kb on - strand at 4718.164 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Benzethonium chloride 0.002 mM remove 4,715,718 + BT3638 0.64 +1.1 4,715,727 + BT3638 0.64 -1.2 4,715,727 + BT3638 0.64 +0.3 4,715,727 + BT3638 0.64 +0.3 4,715,855 + BT3638 0.70 +1.1 4,715,859 + BT3638 0.70 +1.1 4,715,880 + BT3638 0.71 -3.3 4,716,009 + BT3638 0.77 -0.7 4,716,253 + BT3638 0.89 -1.9 4,716,253 + BT3638 0.89 -0.1 4,716,574 + BT3639 0.11 -2.4 4,716,655 + BT3639 0.22 -1.6 4,716,917 + BT3639 0.59 -4.0 4,716,996 + BT3639 0.70 -0.7 4,717,157 + -0.6 4,717,199 + -1.0 4,717,217 + -1.8 4,717,947 - -1.9 4,717,950 + -0.4 4,717,955 - -0.1 4,717,973 - -1.0 4,717,973 - -0.7 4,718,060 - -2.1 4,718,164 + -1.7
Or see this region's nucleotide sequence