Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around p5482_37

Experiment: BHIS with Benzethonium chloride 0.002 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Benzethonium chloride 0.002 mM
30,029	+		p5482_35	0.75	+1.4
30,066	+		p5482_35	0.77	+1.7
30,066	+		p5482_35	0.77	-0.2
30,071	+		p5482_35	0.77	-1.2
30,084	+		p5482_35	0.78	+2.7
30,084	+		p5482_35	0.78	-0.7
30,084	+		p5482_35	0.78	+0.1
30,084	+		p5482_35	0.78	-1.6
30,084	+		p5482_35	0.78	-3.0
30,085	-		p5482_35	0.78	-0.5
30,085	-		p5482_35	0.78	+0.7
30,085	-		p5482_35	0.78	+1.1
30,085	-		p5482_35	0.78	+0.4
30,086	+		p5482_35	0.78	+2.7
30,087	-		p5482_35	0.79	-1.2
30,087	-		p5482_35	0.79	-2.2
30,087	-		p5482_35	0.79	+1.0
30,089	-		p5482_35	0.79	+0.7
30,089	-		p5482_35	0.79	+1.7
30,089	-		p5482_35	0.79	+0.5
30,104	+		p5482_35	0.80	-4.0
30,104	+		p5482_35	0.80	-0.8
30,105	-		p5482_35	0.80	+2.7
30,105	-		p5482_35	0.80	+0.6
30,105	-		p5482_35	0.80	-0.2
30,105	-		p5482_35	0.80	-0.3
30,105	-		p5482_35	0.80	+1.6
30,138	-		p5482_35	0.82	+0.5
30,138	-		p5482_35	0.82	-1.4
30,216	+		p5482_35	0.87	+0.7
30,216	+		p5482_35	0.87	+2.7
30,216	+		p5482_35	0.87	-0.5
30,216	+		p5482_35	0.87	+1.5
30,217	-		p5482_35	0.87	-1.2
30,217	-		p5482_35	0.87	-0.5
30,217	-		p5482_35	0.87	+2.0
30,217	-		p5482_35	0.87	-0.2
30,218	+		p5482_35	0.87	-1.6
30,218	+		p5482_35	0.87	+0.2
30,219	-		p5482_35	0.87	+0.9
30,219	-		p5482_35	0.87	+0.8
30,219	-		p5482_35	0.87	+0.3
30,219	-		p5482_35	0.87	-1.3
30,228	+		p5482_35	0.88	-0.6
30,228	+		p5482_35	0.88	-0.8
30,228	+		p5482_35	0.88	-2.2
30,229	-		p5482_35	0.88	+0.7
30,229	-		p5482_35	0.88	-2.2
30,229	-		p5482_35	0.88	+0.1
30,229	-		p5482_35	0.88	-0.2
30,230	+		p5482_35	0.88	-3.0
30,231	-		p5482_35	0.88	+2.7
30,231	-		p5482_35	0.88	+1.3
30,231	-		p5482_35	0.88	+0.9
30,231	-		p5482_35	0.88	+2.7
30,291	+				+0.8
30,292	-				+2.7
30,292	-				+0.9
30,292	-				+2.7
30,293	+				-1.7
30,320	+				-0.5
30,321	-				-0.9
30,332	+				+0.5
30,332	+				+0.6
30,332	+				+1.3
30,333	-				+0.1
30,333	-				-0.1
30,333	-				+0.7
30,333	-				+0.5
30,380	+				-0.6
30,389	-				+0.3
30,414	+				+0.6
30,415	-				-1.4
30,415	-				-2.3
30,418	+				-3.9
30,418	+				+2.4
30,419	-				-0.5
30,420	+				+2.7
30,420	+				-0.2
30,421	-				+0.3
30,423	+				+2.7
30,432	+				-1.4
30,433	-				-0.3
30,450	+				+1.3
30,524	+		p5482_36	0.23	+1.7
30,524	+		p5482_36	0.23	+0.2
30,525	-		p5482_36	0.23	+0.4
30,525	-		p5482_36	0.23	-0.2
30,526	+		p5482_36	0.23	-1.0
30,532	+		p5482_36	0.25	+1.1
30,532	+		p5482_36	0.25	-2.0
30,533	-		p5482_36	0.25	-1.3
30,533	-		p5482_36	0.25	+0.5
30,562	+		p5482_36	0.32	+0.7
30,562	+		p5482_36	0.32	+0.0
30,563	-		p5482_36	0.33	+0.7
30,589	-		p5482_36	0.39	+2.7
30,607	-		p5482_36	0.44	-1.0
30,663	-		p5482_36	0.58	+0.9
30,672	+		p5482_36	0.60	-1.2
30,673	-		p5482_36	0.60	+0.9
30,673	-		p5482_36	0.60	+2.7
30,687	+		p5482_36	0.64	-0.7
30,687	+		p5482_36	0.64	+2.7
30,753	+		p5482_36	0.80	+0.5
30,754	-		p5482_36	0.80	+0.5
30,754	-		p5482_36	0.80	-2.4
30,790	-		p5482_36	0.89	-1.6
30,817	+				-1.8
30,817	+				-0.3
30,817	+				-2.7
30,817	+				+0.5
30,818	-				-1.0
30,818	-				+0.7
30,818	-				-0.4
30,827	+				-1.9
30,827	+				-2.0
30,828	-				-2.9
30,828	-				-0.1
30,828	-				-0.8
30,840	+				+0.3
30,840	+				-1.7
30,840	+				+0.9
30,841	-				-0.5
30,841	-				-0.1
30,841	-				-1.3
30,842	+				-0.7
30,842	+				-0.5
30,842	+				-0.3
30,843	-				+1.0
30,843	-				-0.3
30,843	-				-1.0
30,843	-				-0.4
30,844	+				+0.8
30,845	-				-0.6
30,845	-				-1.6
30,893	-				-0.8
30,904	-				-2.9
30,905	+				-2.0
30,905	+				-1.5
30,905	+				-0.5
30,906	-				+0.6
30,911	+				+0.8
30,912	+				+0.1
30,912	+				-0.2
30,912	+				-0.2
30,912	+				-1.7
30,912	+				-1.1
30,912	+				+2.7
30,913	-				+0.3
30,913	-				-1.6
30,913	-				+0.0
30,913	-				-1.1
30,913	-				+1.3
30,913	-				-2.6
30,913	-				-1.4
30,914	+				-1.2
30,914	+				-2.6
30,914	+				+2.2
30,914	+				+0.7
30,915	-				+0.8
30,915	-				+1.7
30,925	+				+0.0
30,925	+				+0.7
30,926	-				-0.3
30,926	-				-1.4
30,926	-				+0.1
30,967	+				-0.0
30,968	-				+0.7
31,014	-				-0.3
31,018	+				+2.7
31,022	-				-0.1
31,024	+				-3.5
31,024	+				+1.1
31,025	-				-0.9
31,134	+		p5482_37	0.32	-1.5
31,134	+		p5482_37	0.32	+0.4
31,135	-		p5482_37	0.32	+2.7
31,135	-		p5482_37	0.32	-0.5
31,153	-		p5482_37	0.37	-0.7
31,158	-		p5482_37	0.38	+2.7
31,158	-		p5482_37	0.38	+1.8
31,158	-		p5482_37	0.38	+1.2
31,163	-		p5482_37	0.39	+2.5
31,300	+		p5482_37	0.75	-1.7
31,301	-		p5482_37	0.75	+1.7
31,437	-				+1.2
31,462	+				-1.7
31,492	-				+3.1
31,492	-				-0.2
31,516	+				+0.4
31,517	-				+0.0
31,573	-				-1.7
31,642	-				+0.8
31,642	-				+0.7
31,762	+				-1.5
31,774	-				-1.4
31,774	-				+1.5
31,784	+				-1.9
31,785	-				-1.3
31,785	-				+2.7
31,785	-				-1.0
31,785	-				-0.9
31,796	+				-2.4
31,796	+				-3.6
31,796	+				-2.3
31,845	+				+0.4
31,845	+				-1.7
31,846	-				-2.0
31,849	+				-0.3
31,850	-				+2.7
31,921	-				-0.1
31,964	-		p5482_38	0.11	-0.2
32,004	-		p5482_38	0.15	+0.8
32,004	-		p5482_38	0.15	-1.1
32,026	-		p5482_38	0.17	+1.2
32,068	-		p5482_38	0.21	+0.1
32,068	-		p5482_38	0.21	-0.5
32,068	-		p5482_38	0.21	-0.7
32,072	-		p5482_38	0.22	-0.3
32,072	-		p5482_38	0.22	-1.2
32,142	-		p5482_38	0.29	+1.7
32,142	-		p5482_38	0.29	+2.7
32,154	-		p5482_38	0.30	-0.4
32,160	-		p5482_38	0.30	+0.3
32,199	-		p5482_38	0.34	+1.1
32,199	-		p5482_38	0.34	-2.9
32,209	-		p5482_38	0.35	+0.5
32,240	-		p5482_38	0.38	-0.9
32,240	-		p5482_38	0.38	+0.7
32,240	-		p5482_38	0.38	+1.2
32,242	-		p5482_38	0.39	+2.7
32,242	-		p5482_38	0.39	-1.2
32,242	-		p5482_38	0.39	-1.5
32,250	-		p5482_38	0.39	-0.9
32,250	-				+2.7
32,250	-		p5482_38	0.39	+0.7
32,252	-		p5482_38	0.40	+0.1
32,252	-		p5482_38	0.40	+1.2
32,256	-		p5482_38	0.40	-0.9
32,256	-		p5482_38	0.40	+1.1
32,259	-		p5482_38	0.40	+0.1
32,392	-		p5482_38	0.53	+0.7
32,392	-		p5482_38	0.53	-0.4
32,392	-		p5482_38	0.53	-1.0