Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24670

Experiment: Urea (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Urea (N); with MOPS
5,524,002	+				+1.2
5,524,002	+				-0.5
5,524,002	+				+0.4
5,524,002	+				+0.1
5,524,002	+				-0.1
5,524,002	+				+0.3
5,524,002	+				-1.1
5,524,290	+				-1.6
5,524,290	+				-0.5
5,524,290	+				+0.4
5,524,290	+				+0.2
5,524,290	+				-1.0
5,524,317	+				+0.2
5,524,317	+				+0.2
5,524,317	+				+1.3
5,524,317	+				-0.1
5,524,317	+				-0.7
5,524,318	-				-1.5
5,524,349	+		PFLU_RS24665	0.21	-0.9
5,524,349	+		PFLU_RS24665	0.21	+0.6
5,524,350	-		PFLU_RS24665	0.22	+0.6
5,524,350	-		PFLU_RS24665	0.22	-1.0
5,524,491	+		PFLU_RS24665	0.75	+0.2
5,524,491	+		PFLU_RS24665	0.75	-0.8
5,524,491	+		PFLU_RS24665	0.75	+1.5
5,524,492	-		PFLU_RS24665	0.75	-1.3
5,524,492	-		PFLU_RS24665	0.75	-0.7
5,524,492	-		PFLU_RS24665	0.75	+1.2
5,524,494	+		PFLU_RS24665	0.76	-2.6
5,524,494	+		PFLU_RS24665	0.76	-0.5
5,524,494	+		PFLU_RS24665	0.76	-1.5
5,524,494	+		PFLU_RS24665	0.76	+0.3
5,524,494	+		PFLU_RS24665	0.76	-1.1
5,524,494	+		PFLU_RS24665	0.76	-0.9
5,524,494	+		PFLU_RS24665	0.76	+0.4
5,524,494	+		PFLU_RS24665	0.76	-0.6
5,524,494	+		PFLU_RS24665	0.76	+0.2
5,524,494	+		PFLU_RS24665	0.76	+0.0
5,524,494	+		PFLU_RS24665	0.76	+0.9
5,524,494	+		PFLU_RS24665	0.76	-2.2
5,524,494	+		PFLU_RS24665	0.76	+1.5
5,524,495	-		PFLU_RS24665	0.77	+0.3
5,524,495	-		PFLU_RS24665	0.77	+2.3
5,524,495	-		PFLU_RS24665	0.77	+1.7
5,524,495	-		PFLU_RS24665	0.77	+0.8
5,524,495	-		PFLU_RS24665	0.77	+0.3
5,524,495	-		PFLU_RS24665	0.77	-0.2
5,524,495	-		PFLU_RS24665	0.77	-0.2
5,524,495	-		PFLU_RS24665	0.77	-2.0
5,524,495	-		PFLU_RS24665	0.77	-2.4
5,524,495	-		PFLU_RS24665	0.77	+0.3
5,524,495	-		PFLU_RS24665	0.77	-1.4
5,524,495	-		PFLU_RS24665	0.77	-2.8
5,524,495	-		PFLU_RS24665	0.77	-0.2
5,524,495	-		PFLU_RS24665	0.77	+0.6
5,524,495	-		PFLU_RS24665	0.77	+0.3
5,524,495	-		PFLU_RS24665	0.77	+0.7
5,524,495	-		PFLU_RS24665	0.77	+0.3
5,524,495	-		PFLU_RS24665	0.77	+0.5
5,524,559	+				+0.1
5,524,559	+				-1.1
5,524,559	+				+0.2
5,524,560	-				-0.5
5,524,560	-				+2.1
5,524,568	+				+1.8
5,524,569	-				+0.1
5,524,569	-				+0.6
5,524,622	+				-0.1
5,524,622	+				-2.5
5,524,622	+				-1.0
5,524,622	+				-0.5
5,524,623	-				-0.2
5,524,646	+				-0.5
5,524,646	+				+1.5
5,524,646	+				+0.2
5,524,646	+				-0.3
5,524,647	-				-0.4
5,524,647	-				+0.3
5,524,724	+				-0.4
5,524,724	+				-1.7
5,524,725	-				+0.3
5,524,725	-				+0.7
5,524,725	-				+0.6
5,524,726	+				+1.1
5,524,726	+				+1.0
5,524,726	+				-0.8
5,524,726	+				+0.4
5,524,726	+				-0.5
5,524,726	+				+1.1
5,524,726	+				-1.5
5,524,726	+				-0.0
5,524,726	+				+0.2
5,524,726	+				+0.5
5,524,726	+				+0.9
5,524,726	+				-1.1
5,524,726	+				+0.4
5,524,726	+				-0.1
5,524,726	+				-0.8
5,524,726	+				-1.1
5,524,726	+				+0.0
5,524,726	+				+0.5
5,524,726	+				+0.9
5,524,726	+				+1.0
5,524,726	+				+2.4
5,524,726	+				+0.2
5,524,727	-				-0.5
5,524,727	-				-0.4
5,524,727	-				-0.5
5,524,727	-				-0.4
5,524,727	-				+0.9
5,524,727	-				-2.3
5,524,727	-				-0.2
5,524,727	-				-0.1
5,524,727	-				+0.9
5,524,727	-				+2.5
5,524,727	-				-0.3
5,524,727	-				+0.3
5,524,727	-				+0.8
5,524,727	-				-0.1
5,524,754	-				+0.2
5,524,805	+				+0.0
5,524,805	+				+0.1
5,524,843	+				+0.6
5,524,843	+				+1.4
5,524,843	+				-0.5
5,524,843	+				+0.1
5,524,844	-				+2.5
5,524,948	+				+0.5
5,524,949	-				-0.6
5,524,949	-				-0.9
5,524,963	+		PFLU_RS24670	0.14	-2.1
5,524,963	+		PFLU_RS24670	0.14	-0.1
5,524,963	+		PFLU_RS24670	0.14	-1.8
5,524,964	-		PFLU_RS24670	0.15	-0.5
5,524,964	-		PFLU_RS24670	0.15	-1.1
5,525,231	+				-0.7
5,525,232	-				+0.5
5,525,267	+		PFLU_RS24675	0.15	-0.3
5,525,267	+		PFLU_RS24675	0.15	-2.5
5,525,267	+		PFLU_RS24675	0.15	+1.5
5,525,267	+		PFLU_RS24675	0.15	+0.5
5,525,267	+		PFLU_RS24675	0.15	+1.2
5,525,267	+		PFLU_RS24675	0.15	+0.3
5,525,267	+		PFLU_RS24675	0.15	+1.7
5,525,267	+		PFLU_RS24675	0.15	+0.1
5,525,267	+		PFLU_RS24675	0.15	+2.1
5,525,267	+		PFLU_RS24675	0.15	-0.9
5,525,267	+		PFLU_RS24675	0.15	-0.5
5,525,267	+		PFLU_RS24675	0.15	-1.4
5,525,267	+		PFLU_RS24675	0.15	+0.3
5,525,267	+		PFLU_RS24675	0.15	+0.6
5,525,267	+		PFLU_RS24675	0.15	+1.2
5,525,267	+		PFLU_RS24675	0.15	-0.8
5,525,267	+		PFLU_RS24675	0.15	-0.3
5,525,268	-		PFLU_RS24675	0.16	+1.1
5,525,268	-		PFLU_RS24675	0.16	+0.2
5,525,268	-		PFLU_RS24675	0.16	-0.7
5,525,268	-		PFLU_RS24675	0.16	-0.6
5,525,268	-		PFLU_RS24675	0.16	-1.0
5,525,268	-		PFLU_RS24675	0.16	+0.2
5,525,268	-		PFLU_RS24675	0.16	+0.3
5,525,268	-		PFLU_RS24675	0.16	-0.8
5,525,268	-		PFLU_RS24675	0.16	+1.0
5,525,268	-		PFLU_RS24675	0.16	+0.3
5,525,268	-		PFLU_RS24675	0.16	-0.1
5,525,268	-		PFLU_RS24675	0.16	+0.2
5,525,268	-		PFLU_RS24675	0.16	+0.3
5,525,268	-		PFLU_RS24675	0.16	+1.5
5,525,268	-		PFLU_RS24675	0.16	-1.2
5,525,268	-		PFLU_RS24675	0.16	+0.3
5,525,268	-		PFLU_RS24675	0.16	+0.8
5,525,268	-		PFLU_RS24675	0.16	+0.5
5,525,268	-		PFLU_RS24675	0.16	+0.3
5,525,268	-		PFLU_RS24675	0.16	+0.9
5,525,268	-		PFLU_RS24675	0.16	-0.7
5,525,268	-		PFLU_RS24675	0.16	-0.7
5,525,292	+		PFLU_RS24675	0.24	+1.3
5,525,293	-		PFLU_RS24675	0.25	+0.9
5,525,293	-		PFLU_RS24675	0.25	+0.0
5,525,293	-		PFLU_RS24675	0.25	+0.5
5,525,316	-		PFLU_RS24675	0.33	+0.0
5,525,393	-		PFLU_RS24675	0.61	+0.7
5,525,393	-		PFLU_RS24675	0.61	-1.8
5,525,462	+		PFLU_RS24675	0.85	+1.5
5,525,462	+		PFLU_RS24675	0.85	-0.3
5,525,481	+				+2.2
5,525,481	+				+0.0
5,525,481	+				-0.1
5,525,481	+				-0.6
5,525,481	+				+0.4
5,525,481	+				+1.8
5,525,482	-				+0.2
5,525,482	-				+0.3
5,525,482	-				+0.1
5,525,482	-				-0.8
5,525,482	-				+0.2
5,525,482	-				+0.3
5,525,482	-				-0.1
5,525,482	-				+1.3
5,525,494	-				+0.5
5,525,494	-				+0.9
5,525,521	+				-1.5
5,525,521	+				-0.5
5,525,522	-				+0.5
5,525,522	-				-1.8
5,525,522	-				+0.2
5,525,538	+				-0.4
5,525,539	-				-2.0
5,525,546	+				-0.0
5,525,547	-				+0.2
5,525,547	-				-0.8
5,525,570	+				-2.8
5,525,570	+				-0.1
5,525,570	+				+0.9
5,525,571	-				-0.4
5,525,571	-				+0.3
5,525,571	-				-0.0
5,525,571	-				+0.2
5,525,571	-				+1.1
5,525,571	-				+0.1
5,525,723	+				+0.5
5,525,768	+				-0.2
5,525,768	+				+0.8
5,525,768	+				+0.1
5,525,768	+				+0.3
5,525,769	-				-0.4
5,525,821	+				+0.1
5,525,821	+				+0.6
5,525,822	-				-0.2
5,525,862	+				+1.5
5,525,862	+				+0.1
5,525,863	-				-1.3
5,525,863	-				-1.1
5,525,863	-				-0.4
5,525,877	+		PFLU_RS24680	0.14	-0.5
5,525,877	+		PFLU_RS24680	0.14	-0.5
5,525,877	+		PFLU_RS24680	0.14	-0.2
5,525,888	-		PFLU_RS24680	0.17	-1.4
5,525,888	-		PFLU_RS24680	0.17	-0.8
5,525,888	-		PFLU_RS24680	0.17	+1.5
5,526,054	+		PFLU_RS24680	0.71	-0.7
5,526,054	+		PFLU_RS24680	0.71	+0.3
5,526,054	+		PFLU_RS24680	0.71	-0.7
5,526,055	-		PFLU_RS24680	0.71	+0.0
5,526,055	-		PFLU_RS24680	0.71	+0.5
5,526,055	-		PFLU_RS24680	0.71	+1.2
5,526,141	+				-1.7
5,526,141	+				-1.2
5,526,141	+				-0.2
5,526,142	-				+0.3
5,526,142	-				+0.2
5,526,142	-				+2.1
5,526,142	-				+0.4
5,526,142	-				-0.8
5,526,151	+				-0.8
5,526,151	+				-0.7
5,526,151	+				-1.2
5,526,151	+				-1.7
5,526,151	+				-2.3
5,526,151	+				-0.2
5,526,151	+				-0.1
5,526,151	+				+1.1
5,526,151	+				+0.5
5,526,151	+				+1.1
5,526,151	+				+0.1
5,526,152	-				+0.2
5,526,152	-				-0.1
5,526,152	-				-0.0
5,526,152	-				+1.5
5,526,152	-				-2.4
5,526,152	-				+1.2
5,526,152	-				+0.3
5,526,152	-				+1.3
5,526,152	-				-0.2