Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11715

Experiment: R2A with Magnesium sulfate 3.90625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Magnesium sulfate 3.90625 mM
2,597,495	+		LRK54_RS11710	0.37	-2.3
2,597,495	+		LRK54_RS11710	0.37	-3.4
2,597,495	+		LRK54_RS11710	0.37	-2.1
2,597,495	+		LRK54_RS11710	0.37	-3.1
2,597,496	-		LRK54_RS11710	0.37	-1.7
2,597,496	-		LRK54_RS11710	0.37	-2.3
2,597,496	-		LRK54_RS11710	0.37	-1.9
2,597,742	-		LRK54_RS11710	0.53	-2.0
2,597,852	+		LRK54_RS11710	0.60	-1.6
2,597,853	-		LRK54_RS11710	0.60	+0.3
2,597,853	-		LRK54_RS11710	0.60	-1.6
2,597,853	-		LRK54_RS11710	0.60	-2.2
2,597,853	-		LRK54_RS11710	0.60	-1.7
2,597,895	-		LRK54_RS11710	0.63	-2.0
2,598,209	+		LRK54_RS11710	0.83	-1.0
2,598,209	+		LRK54_RS11710	0.83	+1.0
2,598,209	+		LRK54_RS11710	0.83	-2.4
2,598,209	+		LRK54_RS11710	0.83	-1.2
2,598,209	+		LRK54_RS11710	0.83	-1.4
2,598,209	+		LRK54_RS11710	0.83	-2.1
2,598,209	+		LRK54_RS11710	0.83	-3.3
2,598,209	+		LRK54_RS11710	0.83	-1.6
2,598,209	+		LRK54_RS11710	0.83	-2.9
2,598,210	-		LRK54_RS11710	0.83	-2.2
2,598,210	-		LRK54_RS11710	0.83	-4.0
2,598,210	-		LRK54_RS11710	0.83	-2.2
2,598,210	-		LRK54_RS11710	0.83	-1.9
2,598,210	-		LRK54_RS11710	0.83	-3.1
2,598,210	-		LRK54_RS11710	0.83	+0.6
2,598,210	-		LRK54_RS11710	0.83	-2.9
2,598,210	-		LRK54_RS11710	0.83	-2.7
2,598,210	-		LRK54_RS11710	0.83	-1.2
2,598,218	+		LRK54_RS11710	0.83	-1.4
2,598,218	+		LRK54_RS11710	0.83	-1.6
2,598,218	+		LRK54_RS11710	0.83	-2.1
2,598,218	+		LRK54_RS11710	0.83	-1.2
2,598,218	+		LRK54_RS11710	0.83	-0.0
2,598,218	+		LRK54_RS11710	0.83	-2.7
2,598,218	+		LRK54_RS11710	0.83	-2.9
2,598,218	+		LRK54_RS11710	0.83	-2.3
2,598,218	+		LRK54_RS11710	0.83	-0.7
2,598,218	+		LRK54_RS11710	0.83	-1.0
2,598,219	-		LRK54_RS11710	0.83	-1.7
2,598,219	-		LRK54_RS11710	0.83	-0.7
2,598,219	-		LRK54_RS11710	0.83	-1.9
2,598,219	-		LRK54_RS11710	0.83	+0.6
2,598,219	-		LRK54_RS11710	0.83	-0.0
2,598,219	-		LRK54_RS11710	0.83	-0.5
2,598,219	-		LRK54_RS11710	0.83	-2.3
2,598,219	-		LRK54_RS11710	0.83	-3.7
2,598,221	+		LRK54_RS11710	0.83	+0.6
2,598,221	+		LRK54_RS11710	0.83	-0.4
2,598,221	+		LRK54_RS11710	0.83	-2.8
2,598,221	+		LRK54_RS11710	0.83	-1.0
2,598,221	+		LRK54_RS11710	0.83	-1.7
2,598,221	+		LRK54_RS11710	0.83	-2.6
2,598,221	+		LRK54_RS11710	0.83	-1.7
2,598,222	-		LRK54_RS11710	0.84	-1.2
2,598,222	-		LRK54_RS11710	0.84	-0.4
2,598,222	-		LRK54_RS11710	0.84	-0.7
2,598,222	-		LRK54_RS11710	0.84	-2.1
2,598,222	-		LRK54_RS11710	0.84	+0.6
2,598,222	-		LRK54_RS11710	0.84	-3.0
2,598,222	-		LRK54_RS11710	0.84	-1.4
2,598,328	+				-1.9
2,598,328	+				-0.0
2,598,328	+				-2.2
2,598,328	+				-2.2
2,598,328	+				-2.0
2,598,328	+				-2.7
2,598,328	+				-1.9
2,598,329	-				-0.7
2,598,329	-				-3.6
2,598,329	-				-1.0
2,598,329	-				-0.6
2,598,329	-				-0.4
2,598,329	-				-1.0
2,598,329	-				-0.7
2,598,329	-				-2.0
2,598,329	-				-1.7
2,598,329	-				-1.6
2,598,329	-				-1.7
2,598,350	+				-1.6
2,598,350	+				-1.9
2,598,350	+				-2.7
2,598,350	+				-1.0
2,598,350	+				-0.0
2,598,350	+				-0.4
2,598,350	+				-1.3
2,598,350	+				-1.6
2,598,350	+				-1.7
2,598,350	+				-2.6
2,598,351	-				-0.0
2,598,351	-				-2.0
2,598,351	-				-2.0
2,598,351	-				-2.2
2,598,351	-				-0.7
2,598,351	-				-2.3
2,598,351	-				-1.0
2,598,416	+				-1.4
2,598,416	+				-0.0
2,598,416	+				-2.7
2,598,416	+				-0.4
2,598,416	+				-2.0
2,598,416	+				-1.2
2,598,416	+				-1.6
2,598,416	+				+0.6
2,598,417	-				-2.2
2,598,417	-				-2.2
2,598,417	-				-3.9
2,598,417	-				-1.0
2,598,417	-				-1.4
2,598,417	-				-2.5
2,598,417	-				-2.9
2,598,417	-				-2.7
2,598,725	+				-3.1
2,598,725	+				-2.0
2,598,725	+				-2.1
2,598,725	+				-2.1
2,598,725	+				-1.2
2,598,725	+				-2.5
2,598,725	+				+0.6
2,598,725	+				-2.1
2,598,725	+				-2.9
2,598,726	-				+0.9
2,598,726	-				-0.4
2,598,726	-				+0.8
2,598,726	-				+2.1
2,598,726	-				-0.1
2,598,726	-				-1.2
2,598,726	-				+1.9
2,598,741	+				-1.4
2,598,741	+				-1.6
2,598,741	+				-0.8
2,598,741	+				-2.3
2,598,741	+				-2.1
2,598,741	+				-1.7
2,598,741	+				-2.0
2,598,741	+				-1.2
2,598,741	+				-0.6
2,598,741	+				-2.0
2,598,741	+				-1.3
2,598,742	-				+1.3
2,598,742	-				-0.9
2,598,742	-				+0.6
2,598,742	-				-2.0
2,598,742	-				-1.6
2,598,742	-				+2.0
2,598,742	-				+0.8
2,598,742	-				-2.2
2,598,742	-				-0.1
2,598,802	+				-1.4
2,598,802	+				+0.7
2,598,802	+				+0.7
2,598,802	+				+0.0
2,598,803	-				+2.3
2,598,803	-				+0.6
2,598,803	-				+1.7
2,598,803	-				-0.3
2,598,988	+				+1.6
2,598,989	-				-1.2
2,599,075	+		LRK54_RS11720	0.13	+0.8
2,599,075	+		LRK54_RS11720	0.13	-0.6
2,599,075	+		LRK54_RS11720	0.13	-1.5
2,599,075	+		LRK54_RS11720	0.13	+0.1
2,599,075	+		LRK54_RS11720	0.13	+1.2
2,599,075	+		LRK54_RS11720	0.13	+0.5
2,599,075	+		LRK54_RS11720	0.13	+0.7
2,599,075	+		LRK54_RS11720	0.13	-0.4
2,599,075	+		LRK54_RS11720	0.13	+0.0
2,599,075	+		LRK54_RS11720	0.13	-0.9
2,599,075	+		LRK54_RS11720	0.13	-0.0
2,599,076	-		LRK54_RS11720	0.13	+0.8
2,599,076	-		LRK54_RS11720	0.13	+0.3
2,599,076	-		LRK54_RS11720	0.13	+0.4
2,599,076	-		LRK54_RS11720	0.13	-1.7
2,599,076	-		LRK54_RS11720	0.13	-0.4
2,599,076	-		LRK54_RS11720	0.13	+0.2
2,599,076	-		LRK54_RS11720	0.13	-0.0
2,599,076	-		LRK54_RS11720	0.13	+0.4
2,599,076	-		LRK54_RS11720	0.13	-0.4
2,599,076	-		LRK54_RS11720	0.13	+0.2
2,599,076	-		LRK54_RS11720	0.13	-0.9
2,599,076	-		LRK54_RS11720	0.13	+0.0
2,599,076	-		LRK54_RS11720	0.13	-0.8
2,599,076	-		LRK54_RS11720	0.13	+0.3
2,599,076	-		LRK54_RS11720	0.13	+0.9
2,599,076	-		LRK54_RS11720	0.13	-1.4
2,599,076	-		LRK54_RS11720	0.13	-1.3
2,599,135	+		LRK54_RS11720	0.18	+0.6
2,599,135	+		LRK54_RS11720	0.18	-0.2
2,599,135	+		LRK54_RS11720	0.18	-1.8
2,599,135	+		LRK54_RS11720	0.18	+0.2
2,599,136	-		LRK54_RS11720	0.18	-0.7
2,599,136	-		LRK54_RS11720	0.18	+0.9
2,599,136	-		LRK54_RS11720	0.18	-0.7
2,599,136	-		LRK54_RS11720	0.18	-0.0
2,599,354	+		LRK54_RS11720	0.34	+1.0
2,599,354	+		LRK54_RS11720	0.34	+0.6
2,599,354	+		LRK54_RS11720	0.34	+0.4
2,599,355	-		LRK54_RS11720	0.34	-2.4
2,599,355	-		LRK54_RS11720	0.34	-1.2
2,599,450	+		LRK54_RS11720	0.42	+0.1
2,599,450	+		LRK54_RS11720	0.42	+0.6
2,599,450	+		LRK54_RS11720	0.42	-1.0
2,599,450	+		LRK54_RS11720	0.42	-1.9
2,599,450	+		LRK54_RS11720	0.42	-0.1
2,599,450	+		LRK54_RS11720	0.42	+0.3
2,599,450	+		LRK54_RS11720	0.42	+0.7
2,599,450	+		LRK54_RS11720	0.42	+2.9
2,599,450	+		LRK54_RS11720	0.42	-1.4
2,599,450	+		LRK54_RS11720	0.42	+0.2
2,599,450	+		LRK54_RS11720	0.42	-0.6
2,599,450	+		LRK54_RS11720	0.42	+1.1
2,599,450	+		LRK54_RS11720	0.42	-0.3
2,599,450	+		LRK54_RS11720	0.42	-2.2
2,599,451	-		LRK54_RS11720	0.42	+1.2
2,599,451	-		LRK54_RS11720	0.42	+0.4
2,599,451	-		LRK54_RS11720	0.42	+2.0
2,599,451	-		LRK54_RS11720	0.42	+1.1
2,599,454	+		LRK54_RS11720	0.42	+0.3
2,599,454	+		LRK54_RS11720	0.42	-0.1
2,599,454	+		LRK54_RS11720	0.42	+0.6
2,599,454	+		LRK54_RS11720	0.42	-0.9
2,599,455	-		LRK54_RS11720	0.42	-1.7
2,599,455	-		LRK54_RS11720	0.42	+0.6
2,599,549	+		LRK54_RS11720	0.49	-2.0
2,599,549	+		LRK54_RS11720	0.49	+0.4
2,599,549	+		LRK54_RS11720	0.49	+0.4
2,599,549	+		LRK54_RS11720	0.49	+1.6
2,599,549	+		LRK54_RS11720	0.49	-1.2
2,599,549	+		LRK54_RS11720	0.49	-1.2
2,599,549	+		LRK54_RS11720	0.49	+0.0
2,599,549	+		LRK54_RS11720	0.49	-0.7
2,599,549	+		LRK54_RS11720	0.49	-0.7
2,599,549	+		LRK54_RS11720	0.49	-0.3
2,599,549	+		LRK54_RS11720	0.49	-0.2
2,599,549	+		LRK54_RS11720	0.49	+0.3
2,599,549	+		LRK54_RS11720	0.49	-0.0
2,599,549	+		LRK54_RS11720	0.49	-2.0
2,599,549	+		LRK54_RS11720	0.49	+0.4
2,599,549	+		LRK54_RS11720	0.49	-0.1
2,599,550	-		LRK54_RS11720	0.49	-0.0
2,599,550	-		LRK54_RS11720	0.49	+0.4
2,599,550	-		LRK54_RS11720	0.49	+1.0
2,599,550	-		LRK54_RS11720	0.49	+1.0
2,599,550	-		LRK54_RS11720	0.49	+1.0
2,599,550	-		LRK54_RS11720	0.49	-1.5
2,599,550	-		LRK54_RS11720	0.49	-0.3
2,599,550	-		LRK54_RS11720	0.49	-0.0
2,599,550	-		LRK54_RS11720	0.49	+0.6
2,599,550	-		LRK54_RS11720	0.49	-0.4
2,599,550	-		LRK54_RS11720	0.49	+1.6
2,599,594	+		LRK54_RS11720	0.52	-1.1
2,599,594	+		LRK54_RS11720	0.52	-0.0
2,599,595	-		LRK54_RS11720	0.53	+0.3
2,599,633	+		LRK54_RS11720	0.55	+0.2
2,599,633	+		LRK54_RS11720	0.55	+0.1
2,599,633	+		LRK54_RS11720	0.55	+0.3
2,599,633	+		LRK54_RS11720	0.55	+0.8
2,599,633	+		LRK54_RS11720	0.55	-0.7
2,599,633	+		LRK54_RS11720	0.55	+0.6
2,599,633	+		LRK54_RS11720	0.55	+0.7
2,599,633	+		LRK54_RS11720	0.55	-1.0
2,599,633	+		LRK54_RS11720	0.55	+1.3
2,599,633	+		LRK54_RS11720	0.55	-0.1
2,599,633	+		LRK54_RS11720	0.55	-0.5
2,599,633	+		LRK54_RS11720	0.55	-0.3
2,599,633	+		LRK54_RS11720	0.55	+0.5
2,599,633	+		LRK54_RS11720	0.55	-1.1
2,599,633	+		LRK54_RS11720	0.55	+0.5
2,599,634	-		LRK54_RS11720	0.56	+0.2
2,599,634	-		LRK54_RS11720	0.56	-0.0
2,599,634	-		LRK54_RS11720	0.56	-0.0
2,599,634	-		LRK54_RS11720	0.56	+0.9
2,599,634	-		LRK54_RS11720	0.56	+0.3
2,599,634	-		LRK54_RS11720	0.56	-0.2
2,599,634	-		LRK54_RS11720	0.56	-1.6
2,599,634	-		LRK54_RS11720	0.56	-2.5
2,599,634	-		LRK54_RS11720	0.56	+1.6
2,599,634	-		LRK54_RS11720	0.56	+0.9