Experiment: Polymyxin B sulfate 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4024 and Ga0059261_4025 overlap by 4 nucleotides Ga0059261_4025 and Ga0059261_4026 overlap by 8 nucleotides Ga0059261_4026 and Ga0059261_4027 overlap by 20 nucleotides
Ga0059261_4024: Ga0059261_4024 - Predicted phosphotransferase related to Ser/Thr protein kinases, at 4,142,173 to 4,143,165
_4024
Ga0059261_4025: Ga0059261_4025 - Nucleotidyl transferase, at 4,143,162 to 4,143,923
_4025
Ga0059261_4026: Ga0059261_4026 - double-strand break repair protein AddB, alphaproteobacterial type, at 4,143,916 to 4,146,861
_4026
Ga0059261_4027: Ga0059261_4027 - DNA helicase/exodeoxyribonuclease V, subunit A (EC 3.1.11.5), at 4,146,842 to 4,150,240
_4027
Position (kb)
4143
4144
4145
4146
4147 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4142.947 kb on + strand, within Ga0059261_4024 at 4142.947 kb on + strand, within Ga0059261_4024 at 4143.058 kb on + strand, within Ga0059261_4024 at 4143.059 kb on - strand, within Ga0059261_4024 at 4143.120 kb on + strand at 4143.120 kb on + strand at 4143.378 kb on + strand, within Ga0059261_4025 at 4143.378 kb on + strand, within Ga0059261_4025 at 4143.378 kb on + strand, within Ga0059261_4025 at 4143.837 kb on + strand, within Ga0059261_4025 at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4146.841 kb on + strand at 4146.841 kb on + strand at 4146.841 kb on + strand at 4146.842 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.05 mg/ml remove 4,142,947 + Ga0059261_4024 0.78 +0.7 4,142,947 + Ga0059261_4024 0.78 -0.5 4,143,058 + Ga0059261_4024 0.89 +0.0 4,143,059 - Ga0059261_4024 0.89 -0.7 4,143,120 + -0.3 4,143,120 + +2.9 4,143,378 + Ga0059261_4025 0.28 -1.6 4,143,378 + Ga0059261_4025 0.28 -1.1 4,143,378 + Ga0059261_4025 0.28 -0.5 4,143,837 + Ga0059261_4025 0.89 -0.7 4,143,943 + -0.3 4,143,943 + -0.8 4,143,943 + -1.5 4,143,943 + +0.1 4,143,943 + -0.2 4,143,943 + -0.1 4,143,943 + -1.1 4,146,841 + -0.5 4,146,841 + -1.7 4,146,841 + +0.6 4,146,842 - -0.7
Or see this region's nucleotide sequence