Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1998

Experiment: Polymyxin B sulfate 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.05 mg/ml
2,097,941	+		Ga0059261_1996	0.34	+0.2
2,098,365	+				+0.1
2,098,365	+				+0.5
2,098,372	+				-0.7
2,098,372	+				-0.4
2,098,372	+				-0.0
2,098,372	+				+0.4
2,098,373	-				+0.1
2,098,380	+				-0.4
2,098,380	+				+1.0
2,098,380	+				-1.0
2,098,380	+				-1.3
2,098,380	+				+0.2
2,098,381	-				+0.5
2,098,381	-				+0.0
2,098,381	-				+0.7
2,098,381	-				-0.6
2,098,381	-				-1.1
2,098,436	+		Ga0059261_1997	0.22	+0.1
2,098,436	+		Ga0059261_1997	0.22	+0.3
2,098,436	+		Ga0059261_1997	0.22	+0.5
2,098,436	+		Ga0059261_1997	0.22	-0.2
2,098,437	-		Ga0059261_1997	0.22	+0.1
2,098,437	-		Ga0059261_1997	0.22	-0.4
2,098,437	-		Ga0059261_1997	0.22	-1.9
2,098,437	-		Ga0059261_1997	0.22	+1.6
2,098,437	-		Ga0059261_1997	0.22	-0.3
2,098,505	+		Ga0059261_1997	0.46	+0.2
2,098,506	-		Ga0059261_1997	0.47	+0.4
2,098,506	-		Ga0059261_1997	0.47	-0.1
2,098,506	-		Ga0059261_1997	0.47	-0.5
2,098,520	+		Ga0059261_1997	0.52	-0.5
2,098,520	+		Ga0059261_1997	0.52	-0.6
2,098,520	+		Ga0059261_1997	0.52	-1.0
2,098,520	+				+0.2
2,098,521	-		Ga0059261_1997	0.52	+0.8
2,098,521	-		Ga0059261_1997	0.52	-0.4
2,098,521	-		Ga0059261_1997	0.52	+0.2
2,098,521	-		Ga0059261_1997	0.52	+0.2
2,098,521	-		Ga0059261_1997	0.52	-0.2
2,098,557	+		Ga0059261_1997	0.65	-0.1
2,098,558	-		Ga0059261_1997	0.65	+0.0
2,098,622	+		Ga0059261_1997	0.87	+0.0
2,098,622	+		Ga0059261_1997	0.87	-0.7
2,098,622	+		Ga0059261_1997	0.87	+0.2
2,098,623	-		Ga0059261_1997	0.88	+0.6
2,098,623	-		Ga0059261_1997	0.88	+0.6
2,098,625	+		Ga0059261_1997	0.88	-0.1
2,098,625	+		Ga0059261_1997	0.88	+0.0
2,098,625	+		Ga0059261_1997	0.88	-0.3
2,098,626	-				+1.2
2,098,626	-		Ga0059261_1997	0.89	+2.0
2,098,626	-		Ga0059261_1997	0.89	-0.1
2,098,650	+				+0.9
2,098,650	+				-0.3
2,098,650	+				+0.0
2,098,650	+				-0.1
2,098,650	+				-0.0
2,098,650	+				+0.2
2,098,650	+				+0.0
2,098,651	-				+0.4
2,098,651	-				-0.6
2,098,651	-				-0.2
2,098,651	-				-0.8
2,098,651	-				+0.7
2,098,651	-				-0.8
2,098,651	-				+0.7
2,098,651	-				-0.6
2,098,655	+				-0.0
2,098,655	+				-2.3
2,098,906	+		Ga0059261_1998	0.28	-0.1
2,098,906	+		Ga0059261_1998	0.28	-0.4
2,098,906	+		Ga0059261_1998	0.28	-0.5
2,098,906	+		Ga0059261_1998	0.28	-1.1
2,098,906	+		Ga0059261_1998	0.28	-1.6
2,098,906	+		Ga0059261_1998	0.28	-0.1
2,098,907	-		Ga0059261_1998	0.28	-0.0
2,098,907	-		Ga0059261_1998	0.28	-0.5
2,098,907	-		Ga0059261_1998	0.28	-0.8
2,098,907	-		Ga0059261_1998	0.28	-1.0
2,098,907	-		Ga0059261_1998	0.28	-1.6
2,098,907	-		Ga0059261_1998	0.28	-0.2
2,098,907	-		Ga0059261_1998	0.28	-0.8
2,098,931	+		Ga0059261_1998	0.31	-1.8
2,098,931	+		Ga0059261_1998	0.31	+0.5
2,098,931	+				+2.8
2,098,932	-		Ga0059261_1998	0.31	-0.6
2,098,951	+		Ga0059261_1998	0.33	-0.5
2,098,951	+		Ga0059261_1998	0.33	+0.2
2,098,951	+		Ga0059261_1998	0.33	-2.5
2,098,951	+		Ga0059261_1998	0.33	-0.2
2,098,951	+		Ga0059261_1998	0.33	-0.6
2,098,951	+		Ga0059261_1998	0.33	-0.4
2,098,951	+		Ga0059261_1998	0.33	+0.3
2,098,952	-		Ga0059261_1998	0.33	+0.2
2,098,952	-		Ga0059261_1998	0.33	-1.2
2,098,952	-		Ga0059261_1998	0.33	-0.2
2,098,952	-		Ga0059261_1998	0.33	+0.7
2,098,952	-				+2.2
2,098,952	-		Ga0059261_1998	0.33	-1.7
2,098,961	+		Ga0059261_1998	0.34	-0.5
2,099,040	+		Ga0059261_1998	0.43	-0.4
2,099,041	-		Ga0059261_1998	0.43	-0.4
2,099,041	-		Ga0059261_1998	0.43	+0.1
2,099,041	-		Ga0059261_1998	0.43	-2.3
2,099,041	-		Ga0059261_1998	0.43	+0.7
2,099,148	+		Ga0059261_1998	0.56	-1.6
2,099,151	-		Ga0059261_1998	0.56	-0.6
2,099,151	-		Ga0059261_1998	0.56	-0.0
2,099,442	-		Ga0059261_1998	0.90	-0.8
2,099,442	-		Ga0059261_1998	0.90	-0.7
2,099,450	+				-0.5
2,099,450	+				-0.3
2,099,451	-				+1.2
2,099,492	+				+0.3
2,099,543	+				+0.0
2,099,544	-				+1.1
2,099,544	-				+0.0
2,099,602	+				-0.5
2,099,602	+				+0.3
2,099,602	+				-0.4
2,099,603	-				+0.9
2,099,603	-				+0.8
2,099,603	-				-0.8
2,099,603	-				-0.2
2,099,603	-				+0.2
2,099,603	-				-0.3
2,099,603	-				+0.4
2,099,610	+				-0.1
2,099,610	+				+1.2
2,099,610	+				+0.5
2,099,610	+				-0.4
2,099,611	-				+0.2
2,099,611	-				+0.9
2,099,611	-				-0.1
2,099,684	+				-1.7
2,099,685	-				+0.0
2,099,686	+				+1.5
2,099,686	+				+2.2
2,099,686	+				-0.7
2,099,686	+				-1.8
2,099,686	+				-0.5
2,099,686	+				-0.2
2,099,687	-				-0.5
2,099,693	+				-0.6
2,100,173	-		Ga0059261_1999	0.37	-1.1
2,100,265	+		Ga0059261_1999	0.44	-0.1
2,100,265	+		Ga0059261_1999	0.44	+0.3
2,100,265	+		Ga0059261_1999	0.44	-0.8
2,100,266	-		Ga0059261_1999	0.44	+0.5
2,100,266	-		Ga0059261_1999	0.44	+0.1
2,100,266	-		Ga0059261_1999	0.44	+1.9
2,100,266	-		Ga0059261_1999	0.44	-0.1
2,100,291	-		Ga0059261_1999	0.45	-0.1
2,100,349	+		Ga0059261_1999	0.50	+0.0
2,100,349	+		Ga0059261_1999	0.50	-0.6
2,100,349	+		Ga0059261_1999	0.50	-0.2
2,100,350	-		Ga0059261_1999	0.50	+0.0
2,100,350	-		Ga0059261_1999	0.50	+0.6
2,100,355	+		Ga0059261_1999	0.50	-0.6
2,100,355	+		Ga0059261_1999	0.50	+0.6
2,100,356	-		Ga0059261_1999	0.50	-0.2
2,100,356	-		Ga0059261_1999	0.50	-1.0
2,100,356	-		Ga0059261_1999	0.50	+1.2
2,100,356	-		Ga0059261_1999	0.50	+0.4
2,100,356	-		Ga0059261_1999	0.50	+0.8
2,100,358	+		Ga0059261_1999	0.50	+2.2
2,100,358	+		Ga0059261_1999	0.50	-0.4
2,100,359	-		Ga0059261_1999	0.50	-0.5