Experiment: Polymyxin B sulfate 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0740 and Ga0059261_0741 are separated by 146 nucleotides Ga0059261_0741 and Ga0059261_0742 are separated by 16 nucleotides Ga0059261_0742 and Ga0059261_0743 overlap by 4 nucleotides
Ga0059261_0740: Ga0059261_0740 - Acyl-CoA dehydrogenases, at 768,989 to 770,611
_0740
Ga0059261_0741: Ga0059261_0741 - Domain of unknown function (DUF4403), at 770,758 to 772,281
_0741
Ga0059261_0742: Ga0059261_0742 - Uncharacterized small membrane protein, at 772,298 to 772,627
_0742
Ga0059261_0743: Ga0059261_0743 - Kef-type K+ transport systems, membrane components, at 772,624 to 774,441
_0743
Position (kb) 770
771
772
773 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 769.777 kb on - strand, within Ga0059261_0740 at 769.909 kb on - strand, within Ga0059261_0740 at 769.909 kb on - strand, within Ga0059261_0740 at 769.909 kb on - strand, within Ga0059261_0740 at 769.974 kb on + strand, within Ga0059261_0740 at 769.975 kb on - strand, within Ga0059261_0740 at 769.975 kb on - strand, within Ga0059261_0740 at 769.975 kb on - strand, within Ga0059261_0740 at 770.011 kb on + strand, within Ga0059261_0740 at 770.011 kb on + strand, within Ga0059261_0740 at 770.011 kb on + strand, within Ga0059261_0740 at 770.012 kb on - strand, within Ga0059261_0740 at 770.012 kb on - strand, within Ga0059261_0740 at 770.107 kb on - strand, within Ga0059261_0740 at 770.107 kb on - strand, within Ga0059261_0740 at 770.107 kb on - strand, within Ga0059261_0740 at 770.107 kb on - strand, within Ga0059261_0740 at 770.181 kb on + strand, within Ga0059261_0740 at 770.181 kb on + strand, within Ga0059261_0740 at 770.181 kb on + strand, within Ga0059261_0740 at 770.181 kb on + strand, within Ga0059261_0740 at 770.181 kb on + strand, within Ga0059261_0740 at 770.181 kb on + strand, within Ga0059261_0740 at 770.181 kb on + strand, within Ga0059261_0740 at 770.181 kb on + strand, within Ga0059261_0740 at 770.181 kb on + strand, within Ga0059261_0740 at 770.182 kb on - strand, within Ga0059261_0740 at 770.182 kb on - strand, within Ga0059261_0740 at 770.182 kb on - strand, within Ga0059261_0740 at 770.182 kb on - strand, within Ga0059261_0740 at 770.182 kb on - strand, within Ga0059261_0740 at 770.182 kb on - strand, within Ga0059261_0740 at 770.182 kb on - strand, within Ga0059261_0740 at 770.182 kb on - strand, within Ga0059261_0740 at 770.182 kb on - strand, within Ga0059261_0740 at 770.182 kb on - strand, within Ga0059261_0740 at 770.328 kb on + strand, within Ga0059261_0740 at 770.329 kb on - strand, within Ga0059261_0740 at 770.329 kb on - strand, within Ga0059261_0740 at 770.376 kb on + strand, within Ga0059261_0740 at 770.376 kb on + strand, within Ga0059261_0740 at 770.376 kb on + strand, within Ga0059261_0740 at 770.377 kb on - strand, within Ga0059261_0740 at 770.377 kb on - strand, within Ga0059261_0740 at 770.377 kb on - strand, within Ga0059261_0740 at 770.712 kb on + strand at 770.712 kb on + strand at 770.713 kb on - strand at 770.745 kb on + strand at 770.746 kb on - strand at 770.746 kb on - strand at 770.746 kb on - strand at 770.759 kb on + strand at 770.759 kb on + strand at 770.856 kb on + strand at 770.857 kb on - strand at 770.931 kb on + strand, within Ga0059261_0741 at 770.932 kb on - strand, within Ga0059261_0741 at 771.020 kb on + strand, within Ga0059261_0741 at 771.020 kb on + strand, within Ga0059261_0741 at 771.020 kb on + strand, within Ga0059261_0741 at 771.020 kb on + strand, within Ga0059261_0741 at 771.020 kb on + strand, within Ga0059261_0741 at 771.021 kb on - strand, within Ga0059261_0741 at 771.021 kb on - strand at 771.021 kb on - strand, within Ga0059261_0741 at 771.021 kb on - strand, within Ga0059261_0741 at 771.021 kb on - strand, within Ga0059261_0741 at 771.275 kb on + strand, within Ga0059261_0741 at 771.275 kb on + strand, within Ga0059261_0741 at 771.275 kb on + strand, within Ga0059261_0741 at 771.275 kb on + strand, within Ga0059261_0741 at 771.275 kb on + strand, within Ga0059261_0741 at 771.275 kb on + strand, within Ga0059261_0741 at 771.275 kb on + strand, within Ga0059261_0741 at 771.275 kb on + strand, within Ga0059261_0741 at 771.276 kb on - strand, within Ga0059261_0741 at 771.276 kb on - strand, within Ga0059261_0741 at 771.276 kb on - strand, within Ga0059261_0741 at 771.276 kb on - strand, within Ga0059261_0741 at 771.276 kb on - strand, within Ga0059261_0741 at 771.276 kb on - strand, within Ga0059261_0741 at 771.276 kb on - strand, within Ga0059261_0741 at 771.276 kb on - strand, within Ga0059261_0741 at 771.276 kb on - strand, within Ga0059261_0741 at 771.276 kb on - strand, within Ga0059261_0741 at 771.276 kb on - strand, within Ga0059261_0741 at 771.276 kb on - strand, within Ga0059261_0741 at 771.293 kb on + strand, within Ga0059261_0741 at 771.294 kb on - strand, within Ga0059261_0741 at 771.294 kb on - strand, within Ga0059261_0741 at 771.386 kb on + strand, within Ga0059261_0741 at 771.386 kb on + strand, within Ga0059261_0741 at 771.386 kb on + strand, within Ga0059261_0741 at 771.386 kb on + strand, within Ga0059261_0741 at 771.386 kb on + strand, within Ga0059261_0741 at 771.386 kb on + strand, within Ga0059261_0741 at 771.387 kb on - strand, within Ga0059261_0741 at 771.387 kb on - strand, within Ga0059261_0741 at 771.387 kb on - strand, within Ga0059261_0741 at 771.387 kb on - strand, within Ga0059261_0741 at 771.387 kb on - strand, within Ga0059261_0741 at 771.387 kb on - strand, within Ga0059261_0741 at 771.387 kb on - strand, within Ga0059261_0741 at 771.387 kb on - strand, within Ga0059261_0741 at 771.387 kb on - strand, within Ga0059261_0741 at 771.387 kb on - strand, within Ga0059261_0741 at 771.551 kb on + strand, within Ga0059261_0741 at 771.551 kb on + strand, within Ga0059261_0741 at 771.795 kb on + strand, within Ga0059261_0741 at 771.795 kb on + strand, within Ga0059261_0741 at 771.795 kb on + strand, within Ga0059261_0741 at 771.795 kb on + strand, within Ga0059261_0741 at 771.795 kb on + strand, within Ga0059261_0741 at 771.795 kb on + strand, within Ga0059261_0741 at 771.795 kb on + strand, within Ga0059261_0741 at 771.795 kb on + strand, within Ga0059261_0741 at 771.796 kb on - strand, within Ga0059261_0741 at 771.796 kb on - strand, within Ga0059261_0741 at 771.796 kb on - strand, within Ga0059261_0741 at 771.796 kb on - strand, within Ga0059261_0741 at 771.797 kb on + strand, within Ga0059261_0741 at 771.797 kb on + strand, within Ga0059261_0741 at 771.798 kb on - strand, within Ga0059261_0741 at 771.798 kb on - strand, within Ga0059261_0741 at 771.909 kb on + strand, within Ga0059261_0741 at 771.981 kb on + strand, within Ga0059261_0741 at 771.982 kb on - strand at 771.982 kb on - strand, within Ga0059261_0741 at 772.021 kb on - strand, within Ga0059261_0741 at 772.084 kb on + strand, within Ga0059261_0741 at 772.085 kb on - strand, within Ga0059261_0741 at 772.085 kb on - strand, within Ga0059261_0741 at 772.249 kb on + strand at 772.250 kb on - strand at 772.250 kb on - strand at 772.250 kb on - strand at 772.250 kb on - strand at 772.250 kb on - strand at 772.325 kb on + strand at 772.325 kb on + strand at 772.326 kb on - strand at 772.326 kb on - strand at 772.326 kb on - strand at 772.326 kb on - strand at 772.404 kb on + strand, within Ga0059261_0742 at 772.404 kb on + strand, within Ga0059261_0742 at 772.404 kb on + strand at 772.404 kb on + strand, within Ga0059261_0742 at 772.405 kb on - strand, within Ga0059261_0742 at 772.405 kb on - strand, within Ga0059261_0742 at 772.405 kb on - strand, within Ga0059261_0742 at 772.405 kb on - strand, within Ga0059261_0742 at 772.509 kb on + strand, within Ga0059261_0742 at 772.509 kb on + strand, within Ga0059261_0742 at 772.510 kb on - strand, within Ga0059261_0742 at 772.510 kb on - strand, within Ga0059261_0742 at 772.510 kb on - strand, within Ga0059261_0742 at 772.510 kb on - strand, within Ga0059261_0742 at 772.510 kb on - strand, within Ga0059261_0742 at 772.510 kb on - strand, within Ga0059261_0742 at 772.781 kb on + strand at 772.929 kb on - strand, within Ga0059261_0743 at 772.929 kb on - strand, within Ga0059261_0743 at 773.081 kb on + strand, within Ga0059261_0743 at 773.081 kb on + strand, within Ga0059261_0743 at 773.084 kb on + strand, within Ga0059261_0743 at 773.084 kb on + strand, within Ga0059261_0743 at 773.085 kb on - strand, within Ga0059261_0743 at 773.085 kb on - strand, within Ga0059261_0743 at 773.085 kb on - strand, within Ga0059261_0743 at 773.085 kb on - strand, within Ga0059261_0743 at 773.085 kb on - strand, within Ga0059261_0743 at 773.085 kb on - strand, within Ga0059261_0743 at 773.085 kb on - strand, within Ga0059261_0743 at 773.085 kb on - strand, within Ga0059261_0743 at 773.124 kb on - strand, within Ga0059261_0743
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.05 mg/ml remove 769,777 - Ga0059261_0740 0.49 -0.4 769,909 - Ga0059261_0740 0.57 +0.6 769,909 - Ga0059261_0740 0.57 -0.9 769,909 - Ga0059261_0740 0.57 -0.3 769,974 + Ga0059261_0740 0.61 +0.4 769,975 - Ga0059261_0740 0.61 -0.1 769,975 - Ga0059261_0740 0.61 -0.7 769,975 - Ga0059261_0740 0.61 -0.6 770,011 + Ga0059261_0740 0.63 -1.5 770,011 + Ga0059261_0740 0.63 -0.1 770,011 + Ga0059261_0740 0.63 +0.7 770,012 - Ga0059261_0740 0.63 -1.2 770,012 - Ga0059261_0740 0.63 -1.1 770,107 - Ga0059261_0740 0.69 +0.2 770,107 - Ga0059261_0740 0.69 -0.2 770,107 - Ga0059261_0740 0.69 +0.1 770,107 - Ga0059261_0740 0.69 -0.1 770,181 + Ga0059261_0740 0.73 +0.1 770,181 + Ga0059261_0740 0.73 -0.6 770,181 + Ga0059261_0740 0.73 -0.1 770,181 + Ga0059261_0740 0.73 -0.2 770,181 + Ga0059261_0740 0.73 -0.5 770,181 + Ga0059261_0740 0.73 -0.2 770,181 + Ga0059261_0740 0.73 -0.1 770,181 + Ga0059261_0740 0.73 -0.1 770,181 + Ga0059261_0740 0.73 +0.3 770,182 - Ga0059261_0740 0.74 -0.4 770,182 - Ga0059261_0740 0.74 +0.9 770,182 - Ga0059261_0740 0.74 +0.2 770,182 - Ga0059261_0740 0.74 -0.4 770,182 - Ga0059261_0740 0.74 -0.1 770,182 - Ga0059261_0740 0.74 +0.1 770,182 - Ga0059261_0740 0.74 +0.4 770,182 - Ga0059261_0740 0.74 -0.6 770,182 - Ga0059261_0740 0.74 -0.2 770,182 - Ga0059261_0740 0.74 -0.4 770,328 + Ga0059261_0740 0.83 +0.0 770,329 - Ga0059261_0740 0.83 -0.4 770,329 - Ga0059261_0740 0.83 +0.6 770,376 + Ga0059261_0740 0.85 +0.2 770,376 + Ga0059261_0740 0.85 +0.4 770,376 + Ga0059261_0740 0.85 -0.9 770,377 - Ga0059261_0740 0.86 +0.4 770,377 - Ga0059261_0740 0.86 -0.0 770,377 - Ga0059261_0740 0.86 +0.3 770,712 + -2.6 770,712 + +0.3 770,713 - -0.7 770,745 + +0.3 770,746 - +0.5 770,746 - -0.4 770,746 - -1.1 770,759 + +0.5 770,759 + +0.6 770,856 + -0.5 770,857 - -1.4 770,931 + Ga0059261_0741 0.11 -2.7 770,932 - Ga0059261_0741 0.11 -0.6 771,020 + Ga0059261_0741 0.17 -2.2 771,020 + Ga0059261_0741 0.17 -1.1 771,020 + Ga0059261_0741 0.17 -1.1 771,020 + Ga0059261_0741 0.17 -3.0 771,020 + Ga0059261_0741 0.17 -1.9 771,021 - Ga0059261_0741 0.17 -1.7 771,021 - -0.7 771,021 - Ga0059261_0741 0.17 -2.1 771,021 - Ga0059261_0741 0.17 -1.9 771,021 - Ga0059261_0741 0.17 -2.3 771,275 + Ga0059261_0741 0.34 -2.6 771,275 + Ga0059261_0741 0.34 -1.1 771,275 + Ga0059261_0741 0.34 -1.5 771,275 + Ga0059261_0741 0.34 -2.0 771,275 + Ga0059261_0741 0.34 -2.6 771,275 + Ga0059261_0741 0.34 -1.4 771,275 + Ga0059261_0741 0.34 -2.5 771,275 + Ga0059261_0741 0.34 -1.5 771,276 - Ga0059261_0741 0.34 -2.7 771,276 - Ga0059261_0741 0.34 -1.5 771,276 - Ga0059261_0741 0.34 -1.6 771,276 - Ga0059261_0741 0.34 -2.3 771,276 - Ga0059261_0741 0.34 -0.7 771,276 - Ga0059261_0741 0.34 -1.6 771,276 - Ga0059261_0741 0.34 -0.5 771,276 - Ga0059261_0741 0.34 -1.2 771,276 - Ga0059261_0741 0.34 -1.7 771,276 - Ga0059261_0741 0.34 -0.7 771,276 - Ga0059261_0741 0.34 -1.3 771,276 - Ga0059261_0741 0.34 -0.7 771,293 + Ga0059261_0741 0.35 -1.7 771,294 - Ga0059261_0741 0.35 -1.1 771,294 - Ga0059261_0741 0.35 -1.0 771,386 + Ga0059261_0741 0.41 -1.8 771,386 + Ga0059261_0741 0.41 +0.1 771,386 + Ga0059261_0741 0.41 -0.7 771,386 + Ga0059261_0741 0.41 -2.3 771,386 + Ga0059261_0741 0.41 -1.8 771,386 + Ga0059261_0741 0.41 -0.9 771,387 - Ga0059261_0741 0.41 -2.0 771,387 - Ga0059261_0741 0.41 -0.7 771,387 - Ga0059261_0741 0.41 -1.5 771,387 - Ga0059261_0741 0.41 -2.5 771,387 - Ga0059261_0741 0.41 -2.0 771,387 - Ga0059261_0741 0.41 -1.7 771,387 - Ga0059261_0741 0.41 +0.2 771,387 - Ga0059261_0741 0.41 -1.5 771,387 - Ga0059261_0741 0.41 -1.9 771,387 - Ga0059261_0741 0.41 -0.5 771,551 + Ga0059261_0741 0.52 -2.2 771,551 + Ga0059261_0741 0.52 -1.5 771,795 + Ga0059261_0741 0.68 -1.5 771,795 + Ga0059261_0741 0.68 -1.5 771,795 + Ga0059261_0741 0.68 -1.7 771,795 + Ga0059261_0741 0.68 -1.5 771,795 + Ga0059261_0741 0.68 -3.5 771,795 + Ga0059261_0741 0.68 -2.8 771,795 + Ga0059261_0741 0.68 -1.6 771,795 + Ga0059261_0741 0.68 -2.8 771,796 - Ga0059261_0741 0.68 -1.3 771,796 - Ga0059261_0741 0.68 -2.0 771,796 - Ga0059261_0741 0.68 +0.3 771,796 - Ga0059261_0741 0.68 -1.5 771,797 + Ga0059261_0741 0.68 -0.7 771,797 + Ga0059261_0741 0.68 -2.1 771,798 - Ga0059261_0741 0.68 -2.2 771,798 - Ga0059261_0741 0.68 -1.4 771,909 + Ga0059261_0741 0.76 -1.4 771,981 + Ga0059261_0741 0.80 -1.5 771,982 - -1.5 771,982 - Ga0059261_0741 0.80 -1.9 772,021 - Ga0059261_0741 0.83 -2.8 772,084 + Ga0059261_0741 0.87 -0.9 772,085 - Ga0059261_0741 0.87 -1.8 772,085 - Ga0059261_0741 0.87 -2.6 772,249 + -0.6 772,250 - -1.7 772,250 - -3.6 772,250 - -0.7 772,250 - -0.8 772,250 - -4.3 772,325 + -0.9 772,325 + -2.9 772,326 - +0.9 772,326 - -0.4 772,326 - -0.9 772,326 - +0.4 772,404 + Ga0059261_0742 0.32 +0.3 772,404 + Ga0059261_0742 0.32 -0.1 772,404 + +0.9 772,404 + Ga0059261_0742 0.32 -1.6 772,405 - Ga0059261_0742 0.32 +0.3 772,405 - Ga0059261_0742 0.32 +0.1 772,405 - Ga0059261_0742 0.32 -1.0 772,405 - Ga0059261_0742 0.32 -0.5 772,509 + Ga0059261_0742 0.64 -0.2 772,509 + Ga0059261_0742 0.64 +0.3 772,510 - Ga0059261_0742 0.64 -0.1 772,510 - Ga0059261_0742 0.64 +0.7 772,510 - Ga0059261_0742 0.64 +0.2 772,510 - Ga0059261_0742 0.64 -0.4 772,510 - Ga0059261_0742 0.64 +0.4 772,510 - Ga0059261_0742 0.64 +0.4 772,781 + +0.6 772,929 - Ga0059261_0743 0.17 -0.5 772,929 - Ga0059261_0743 0.17 -0.2 773,081 + Ga0059261_0743 0.25 -0.8 773,081 + Ga0059261_0743 0.25 -0.6 773,084 + Ga0059261_0743 0.25 -0.1 773,084 + Ga0059261_0743 0.25 -1.5 773,085 - Ga0059261_0743 0.25 +0.7 773,085 - Ga0059261_0743 0.25 +0.5 773,085 - Ga0059261_0743 0.25 -0.5 773,085 - Ga0059261_0743 0.25 -0.4 773,085 - Ga0059261_0743 0.25 +0.3 773,085 - Ga0059261_0743 0.25 -0.6 773,085 - Ga0059261_0743 0.25 +0.3 773,085 - Ga0059261_0743 0.25 +0.9 773,124 - Ga0059261_0743 0.28 -0.1
Or see this region's nucleotide sequence