Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS33465 and AZOBR_RS33470 are separated by 528 nucleotides AZOBR_RS33470 and AZOBR_RS33475 are separated by 5 nucleotides AZOBR_RS33475 and AZOBR_RS33480 are separated by 201 nucleotides
AZOBR_RS33465: AZOBR_RS33465 - GDP-mannose 4 6-dehydratase, at 21,716 to 22,696
_RS33465
AZOBR_RS33470: AZOBR_RS33470 - sugar ABC transporter permease, at 23,225 to 24,040
_RS33470
AZOBR_RS33475: AZOBR_RS33475 - sugar ABC transporter ATP-binding protein, at 24,046 to 24,822
_RS33475
AZOBR_RS33480: AZOBR_RS33480 - hydrolase, at 25,024 to 25,740
_RS33480
Position (kb)
23
24
25 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 22.227 kb on + strand at 22.305 kb on + strand, within AZOBR_RS33465 at 22.305 kb on + strand, within AZOBR_RS33465 at 22.612 kb on - strand at 22.621 kb on - strand at 22.650 kb on + strand at 22.651 kb on - strand at 22.651 kb on - strand at 22.704 kb on + strand at 22.705 kb on - strand at 22.708 kb on + strand at 22.709 kb on - strand at 22.709 kb on - strand at 22.895 kb on + strand at 22.904 kb on + strand at 22.905 kb on - strand at 23.000 kb on - strand at 23.000 kb on - strand at 23.086 kb on + strand at 23.152 kb on + strand at 23.152 kb on + strand at 23.152 kb on + strand at 23.152 kb on + strand at 23.213 kb on + strand at 23.456 kb on + strand, within AZOBR_RS33470 at 23.618 kb on + strand at 23.619 kb on - strand, within AZOBR_RS33470 at 23.662 kb on - strand, within AZOBR_RS33470 at 23.889 kb on - strand, within AZOBR_RS33470 at 23.956 kb on - strand at 24.002 kb on + strand at 24.002 kb on + strand at 24.051 kb on + strand at 24.293 kb on - strand, within AZOBR_RS33475 at 24.506 kb on - strand at 24.775 kb on + strand at 24.776 kb on - strand at 24.976 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 22,227 + -1.6 22,305 + AZOBR_RS33465 0.60 +0.1 22,305 + AZOBR_RS33465 0.60 +3.0 22,612 - +2.0 22,621 - +1.7 22,650 + -1.7 22,651 - -0.9 22,651 - +2.2 22,704 + +1.4 22,705 - +1.5 22,708 + +1.4 22,709 - +2.1 22,709 - +0.5 22,895 + +1.9 22,904 + -1.9 22,905 - -0.1 23,000 - +0.7 23,000 - -1.1 23,086 + -0.6 23,152 + +0.5 23,152 + -0.3 23,152 + +0.4 23,152 + -0.0 23,213 + -0.3 23,456 + AZOBR_RS33470 0.28 -2.4 23,618 + -0.3 23,619 - AZOBR_RS33470 0.48 -1.6 23,662 - AZOBR_RS33470 0.54 -2.7 23,889 - AZOBR_RS33470 0.81 -2.5 23,956 - +0.2 24,002 + -0.9 24,002 + -1.3 24,051 + -0.3 24,293 - AZOBR_RS33475 0.32 -1.9 24,506 - +0.7 24,775 + -0.9 24,776 - -0.3 24,976 - -0.9
Or see this region's nucleotide sequence