Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31425 and AZOBR_RS31430 are separated by 151 nucleotides AZOBR_RS31430 and AZOBR_RS31435 are separated by 176 nucleotides
AZOBR_RS31425: AZOBR_RS31425 - glucuronate isomerase, at 417,313 to 418,716
_RS31425
AZOBR_RS31430: AZOBR_RS31430 - galactarate dehydratase, at 418,868 to 420,391
_RS31430
AZOBR_RS31435: AZOBR_RS31435 - LysR family transcriptional regulator, at 420,568 to 421,434
_RS31435
Position (kb) 418
419
420
421 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 418.015 kb on + strand, within AZOBR_RS31425 at 418.309 kb on + strand, within AZOBR_RS31425 at 418.310 kb on - strand, within AZOBR_RS31425 at 418.705 kb on + strand at 418.706 kb on - strand at 418.706 kb on - strand at 418.706 kb on - strand at 418.820 kb on - strand at 419.039 kb on + strand, within AZOBR_RS31430 at 419.039 kb on + strand, within AZOBR_RS31430 at 419.040 kb on - strand, within AZOBR_RS31430 at 419.040 kb on - strand, within AZOBR_RS31430 at 419.040 kb on - strand, within AZOBR_RS31430 at 419.135 kb on + strand, within AZOBR_RS31430 at 419.240 kb on + strand, within AZOBR_RS31430 at 419.240 kb on + strand, within AZOBR_RS31430 at 419.241 kb on - strand, within AZOBR_RS31430 at 419.241 kb on - strand, within AZOBR_RS31430 at 419.366 kb on + strand, within AZOBR_RS31430 at 419.367 kb on - strand, within AZOBR_RS31430 at 419.367 kb on - strand, within AZOBR_RS31430 at 419.699 kb on + strand, within AZOBR_RS31430 at 419.700 kb on - strand, within AZOBR_RS31430 at 419.796 kb on - strand, within AZOBR_RS31430 at 419.882 kb on + strand, within AZOBR_RS31430 at 419.882 kb on + strand, within AZOBR_RS31430 at 419.883 kb on - strand, within AZOBR_RS31430 at 419.883 kb on - strand, within AZOBR_RS31430 at 419.883 kb on - strand, within AZOBR_RS31430 at 420.020 kb on + strand, within AZOBR_RS31430 at 420.021 kb on - strand, within AZOBR_RS31430 at 420.205 kb on + strand, within AZOBR_RS31430 at 420.220 kb on + strand, within AZOBR_RS31430 at 420.722 kb on + strand, within AZOBR_RS31435 at 420.722 kb on + strand, within AZOBR_RS31435 at 420.722 kb on + strand, within AZOBR_RS31435 at 420.723 kb on - strand, within AZOBR_RS31435 at 420.723 kb on - strand, within AZOBR_RS31435 at 420.783 kb on - strand, within AZOBR_RS31435 at 420.783 kb on - strand, within AZOBR_RS31435 at 420.977 kb on + strand, within AZOBR_RS31435 at 420.978 kb on - strand, within AZOBR_RS31435 at 420.978 kb on - strand, within AZOBR_RS31435
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 418,015 + AZOBR_RS31425 0.50 -0.1 418,309 + AZOBR_RS31425 0.71 -1.0 418,310 - AZOBR_RS31425 0.71 -0.4 418,705 + -0.9 418,706 - +0.1 418,706 - -3.0 418,706 - -0.2 418,820 - +0.6 419,039 + AZOBR_RS31430 0.11 +2.6 419,039 + AZOBR_RS31430 0.11 +0.8 419,040 - AZOBR_RS31430 0.11 +0.5 419,040 - AZOBR_RS31430 0.11 -0.7 419,040 - AZOBR_RS31430 0.11 +0.7 419,135 + AZOBR_RS31430 0.18 -0.5 419,240 + AZOBR_RS31430 0.24 +1.9 419,240 + AZOBR_RS31430 0.24 +0.5 419,241 - AZOBR_RS31430 0.24 +0.4 419,241 - AZOBR_RS31430 0.24 -0.4 419,366 + AZOBR_RS31430 0.33 +0.3 419,367 - AZOBR_RS31430 0.33 -0.9 419,367 - AZOBR_RS31430 0.33 +0.5 419,699 + AZOBR_RS31430 0.55 -0.2 419,700 - AZOBR_RS31430 0.55 +0.6 419,796 - AZOBR_RS31430 0.61 -1.3 419,882 + AZOBR_RS31430 0.67 +2.3 419,882 + AZOBR_RS31430 0.67 +1.3 419,883 - AZOBR_RS31430 0.67 +0.3 419,883 - AZOBR_RS31430 0.67 +1.1 419,883 - AZOBR_RS31430 0.67 -0.1 420,020 + AZOBR_RS31430 0.76 +0.4 420,021 - AZOBR_RS31430 0.76 -1.1 420,205 + AZOBR_RS31430 0.88 +0.6 420,220 + AZOBR_RS31430 0.89 +0.8 420,722 + AZOBR_RS31435 0.18 -2.4 420,722 + AZOBR_RS31435 0.18 -0.3 420,722 + AZOBR_RS31435 0.18 -2.2 420,723 - AZOBR_RS31435 0.18 -0.9 420,723 - AZOBR_RS31435 0.18 -1.0 420,783 - AZOBR_RS31435 0.25 +0.1 420,783 - AZOBR_RS31435 0.25 -2.1 420,977 + AZOBR_RS31435 0.47 -0.0 420,978 - AZOBR_RS31435 0.47 -0.3 420,978 - AZOBR_RS31435 0.47 -0.1
Or see this region's nucleotide sequence