Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29425 and AZOBR_RS29430 are separated by 16 nucleotides AZOBR_RS29430 and AZOBR_RS29435 overlap by 4 nucleotides AZOBR_RS29435 and AZOBR_RS29440 are separated by 2 nucleotides AZOBR_RS29440 and AZOBR_RS29445 are separated by 212 nucleotides
AZOBR_RS29425: AZOBR_RS29425 - hypothetical protein, at 722,570 to 723,424
_RS29425
AZOBR_RS29430: AZOBR_RS29430 - hemin ABC transporter substrate-binding protein, at 723,441 to 724,316
_RS29430
AZOBR_RS29435: AZOBR_RS29435 - hemin ABC transporter permease, at 724,313 to 725,422
_RS29435
AZOBR_RS29440: AZOBR_RS29440 - hemin ABC transporter ATP-binding protein, at 725,425 to 726,099
_RS29440
AZOBR_RS29445: AZOBR_RS29445 - transcriptional regulator, at 726,312 to 726,980
_RS29445
Position (kb) 724
725
726 Strain fitness (log2 ratio) -2
-1
0
1 at 723.651 kb on + strand, within AZOBR_RS29430 at 723.651 kb on + strand, within AZOBR_RS29430 at 723.651 kb on + strand, within AZOBR_RS29430 at 723.652 kb on - strand, within AZOBR_RS29430 at 724.062 kb on + strand, within AZOBR_RS29430 at 724.062 kb on + strand, within AZOBR_RS29430 at 724.062 kb on + strand, within AZOBR_RS29430 at 724.063 kb on - strand, within AZOBR_RS29430 at 724.887 kb on + strand, within AZOBR_RS29435 at 724.916 kb on + strand, within AZOBR_RS29435 at 724.917 kb on - strand, within AZOBR_RS29435 at 724.917 kb on - strand, within AZOBR_RS29435 at 724.917 kb on - strand, within AZOBR_RS29435 at 725.920 kb on + strand, within AZOBR_RS29440 at 726.199 kb on + strand at 726.351 kb on + strand at 726.352 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 723,651 + AZOBR_RS29430 0.24 -0.7 723,651 + AZOBR_RS29430 0.24 +0.0 723,651 + AZOBR_RS29430 0.24 +0.8 723,652 - AZOBR_RS29430 0.24 -0.1 724,062 + AZOBR_RS29430 0.71 -2.2 724,062 + AZOBR_RS29430 0.71 +1.4 724,062 + AZOBR_RS29430 0.71 -0.6 724,063 - AZOBR_RS29430 0.71 -0.2 724,887 + AZOBR_RS29435 0.52 +0.9 724,916 + AZOBR_RS29435 0.54 +0.6 724,917 - AZOBR_RS29435 0.54 +0.4 724,917 - AZOBR_RS29435 0.54 +0.7 724,917 - AZOBR_RS29435 0.54 -0.1 725,920 + AZOBR_RS29440 0.73 +0.3 726,199 + +0.9 726,351 + -1.0 726,352 - +0.5
Or see this region's nucleotide sequence