Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS28125 and AZOBR_RS28130 are separated by 302 nucleotides AZOBR_RS28130 and AZOBR_RS28135 overlap by 1 nucleotides AZOBR_RS28135 and AZOBR_RS28140 are separated by 97 nucleotides
AZOBR_RS28125: AZOBR_RS28125 - 3-carboxy-cis cis-muconate cycloisomerase, at 481,450 to 482,811
_RS28125
AZOBR_RS28130: AZOBR_RS28130 - pyridine nucleotide-disulfide oxidoreductase, at 483,114 to 484,367
_RS28130
AZOBR_RS28135: AZOBR_RS28135 - reductase, at 484,367 to 484,690
_RS28135
AZOBR_RS28140: AZOBR_RS28140 - cytochrome P450, at 484,788 to 485,951
_RS28140
Position (kb) 483
484
485 Strain fitness (log2 ratio) -2
-1
0
1 at 482.251 kb on + strand, within AZOBR_RS28125 at 482.620 kb on + strand, within AZOBR_RS28125 at 482.743 kb on + strand at 482.743 kb on + strand at 482.743 kb on + strand at 483.188 kb on + strand at 483.189 kb on - strand at 483.215 kb on + strand at 483.215 kb on + strand at 483.216 kb on - strand at 483.216 kb on - strand at 483.216 kb on - strand at 483.271 kb on + strand, within AZOBR_RS28130 at 483.271 kb on + strand, within AZOBR_RS28130 at 483.271 kb on + strand, within AZOBR_RS28130 at 483.272 kb on - strand, within AZOBR_RS28130 at 483.365 kb on - strand, within AZOBR_RS28130 at 483.365 kb on - strand, within AZOBR_RS28130 at 483.766 kb on + strand, within AZOBR_RS28130 at 483.767 kb on - strand, within AZOBR_RS28130 at 483.880 kb on + strand, within AZOBR_RS28130 at 483.881 kb on - strand, within AZOBR_RS28130 at 484.220 kb on - strand, within AZOBR_RS28130 at 484.220 kb on - strand, within AZOBR_RS28130 at 484.536 kb on + strand, within AZOBR_RS28135 at 484.537 kb on - strand, within AZOBR_RS28135 at 484.537 kb on - strand, within AZOBR_RS28135 at 484.537 kb on - strand, within AZOBR_RS28135 at 484.537 kb on - strand, within AZOBR_RS28135 at 484.537 kb on - strand, within AZOBR_RS28135 at 484.999 kb on + strand, within AZOBR_RS28140 at 484.999 kb on + strand, within AZOBR_RS28140
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 482,251 + AZOBR_RS28125 0.59 -0.5 482,620 + AZOBR_RS28125 0.86 -0.6 482,743 + -0.9 482,743 + +0.5 482,743 + +1.0 483,188 + -1.1 483,189 - +0.1 483,215 + +0.6 483,215 + +0.6 483,216 - +0.3 483,216 - -0.7 483,216 - +1.3 483,271 + AZOBR_RS28130 0.13 +0.2 483,271 + AZOBR_RS28130 0.13 +0.2 483,271 + AZOBR_RS28130 0.13 +0.0 483,272 - AZOBR_RS28130 0.13 +0.0 483,365 - AZOBR_RS28130 0.20 +0.3 483,365 - AZOBR_RS28130 0.20 -0.9 483,766 + AZOBR_RS28130 0.52 +0.0 483,767 - AZOBR_RS28130 0.52 -0.6 483,880 + AZOBR_RS28130 0.61 +0.4 483,881 - AZOBR_RS28130 0.61 -0.7 484,220 - AZOBR_RS28130 0.88 -0.8 484,220 - AZOBR_RS28130 0.88 -2.6 484,536 + AZOBR_RS28135 0.52 +0.1 484,537 - AZOBR_RS28135 0.52 +0.9 484,537 - AZOBR_RS28135 0.52 +1.4 484,537 - AZOBR_RS28135 0.52 -0.3 484,537 - AZOBR_RS28135 0.52 -1.8 484,537 - AZOBR_RS28135 0.52 -0.4 484,999 + AZOBR_RS28140 0.18 -0.5 484,999 + AZOBR_RS28140 0.18 -0.2
Or see this region's nucleotide sequence