Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27700 and AZOBR_RS27705 are separated by 4 nucleotides AZOBR_RS27705 and AZOBR_RS27710 are separated by 456 nucleotides
AZOBR_RS27700: AZOBR_RS27700 - hypothetical protein, at 376,565 to 377,827
_RS27700
AZOBR_RS27705: AZOBR_RS27705 - hypothetical protein, at 377,832 to 380,573
_RS27705
AZOBR_RS27710: AZOBR_RS27710 - hypothetical protein, at 381,030 to 381,809
_RS27710
Position (kb) 377
378
379
380
381 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 376.876 kb on + strand, within AZOBR_RS27700 at 376.876 kb on + strand, within AZOBR_RS27700 at 376.929 kb on + strand, within AZOBR_RS27700 at 376.970 kb on + strand, within AZOBR_RS27700 at 376.971 kb on - strand, within AZOBR_RS27700 at 376.971 kb on - strand, within AZOBR_RS27700 at 376.971 kb on - strand, within AZOBR_RS27700 at 376.971 kb on - strand, within AZOBR_RS27700 at 376.986 kb on + strand, within AZOBR_RS27700 at 376.987 kb on - strand, within AZOBR_RS27700 at 377.064 kb on + strand, within AZOBR_RS27700 at 377.065 kb on - strand, within AZOBR_RS27700 at 377.265 kb on + strand, within AZOBR_RS27700 at 377.266 kb on - strand, within AZOBR_RS27700 at 377.266 kb on - strand, within AZOBR_RS27700 at 377.266 kb on - strand, within AZOBR_RS27700 at 377.373 kb on + strand, within AZOBR_RS27700 at 377.374 kb on - strand, within AZOBR_RS27700 at 377.432 kb on - strand, within AZOBR_RS27700 at 377.470 kb on + strand, within AZOBR_RS27700 at 377.475 kb on + strand, within AZOBR_RS27700 at 377.475 kb on + strand, within AZOBR_RS27700 at 377.476 kb on - strand, within AZOBR_RS27700 at 377.520 kb on + strand, within AZOBR_RS27700 at 377.520 kb on + strand, within AZOBR_RS27700 at 377.520 kb on + strand, within AZOBR_RS27700 at 377.520 kb on + strand, within AZOBR_RS27700 at 377.520 kb on + strand, within AZOBR_RS27700 at 377.520 kb on + strand, within AZOBR_RS27700 at 377.521 kb on - strand, within AZOBR_RS27700 at 377.589 kb on + strand, within AZOBR_RS27700 at 377.589 kb on + strand, within AZOBR_RS27700 at 377.801 kb on - strand at 378.196 kb on + strand, within AZOBR_RS27705 at 378.196 kb on + strand, within AZOBR_RS27705 at 378.337 kb on + strand, within AZOBR_RS27705 at 378.364 kb on + strand, within AZOBR_RS27705 at 379.127 kb on - strand, within AZOBR_RS27705 at 379.394 kb on - strand, within AZOBR_RS27705 at 379.394 kb on - strand, within AZOBR_RS27705 at 379.693 kb on + strand, within AZOBR_RS27705 at 380.218 kb on + strand, within AZOBR_RS27705 at 380.219 kb on - strand, within AZOBR_RS27705 at 380.219 kb on - strand, within AZOBR_RS27705 at 380.219 kb on - strand, within AZOBR_RS27705 at 380.281 kb on + strand, within AZOBR_RS27705 at 380.282 kb on - strand, within AZOBR_RS27705 at 380.282 kb on - strand, within AZOBR_RS27705 at 380.408 kb on - strand at 380.524 kb on + strand at 380.525 kb on - strand at 380.669 kb on + strand at 380.814 kb on - strand at 380.814 kb on - strand at 380.825 kb on + strand at 381.127 kb on + strand, within AZOBR_RS27710 at 381.286 kb on + strand, within AZOBR_RS27710 at 381.287 kb on - strand, within AZOBR_RS27710 at 381.287 kb on - strand, within AZOBR_RS27710 at 381.287 kb on - strand, within AZOBR_RS27710 at 381.484 kb on + strand, within AZOBR_RS27710 at 381.484 kb on + strand, within AZOBR_RS27710 at 381.484 kb on + strand, within AZOBR_RS27710 at 381.484 kb on + strand, within AZOBR_RS27710 at 381.485 kb on - strand, within AZOBR_RS27710 at 381.485 kb on - strand, within AZOBR_RS27710 at 381.504 kb on - strand, within AZOBR_RS27710 at 381.520 kb on + strand, within AZOBR_RS27710 at 381.520 kb on + strand, within AZOBR_RS27710 at 381.521 kb on - strand, within AZOBR_RS27710 at 381.521 kb on - strand, within AZOBR_RS27710
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 376,876 + AZOBR_RS27700 0.25 -0.3 376,876 + AZOBR_RS27700 0.25 -0.0 376,929 + AZOBR_RS27700 0.29 -0.1 376,970 + AZOBR_RS27700 0.32 -1.2 376,971 - AZOBR_RS27700 0.32 -0.1 376,971 - AZOBR_RS27700 0.32 +1.1 376,971 - AZOBR_RS27700 0.32 +0.1 376,971 - AZOBR_RS27700 0.32 +2.2 376,986 + AZOBR_RS27700 0.33 -0.2 376,987 - AZOBR_RS27700 0.33 +0.3 377,064 + AZOBR_RS27700 0.40 -1.0 377,065 - AZOBR_RS27700 0.40 +0.8 377,265 + AZOBR_RS27700 0.55 -0.9 377,266 - AZOBR_RS27700 0.56 -0.5 377,266 - AZOBR_RS27700 0.56 -1.4 377,266 - AZOBR_RS27700 0.56 -0.6 377,373 + AZOBR_RS27700 0.64 -0.2 377,374 - AZOBR_RS27700 0.64 -0.7 377,432 - AZOBR_RS27700 0.69 +0.7 377,470 + AZOBR_RS27700 0.72 -0.3 377,475 + AZOBR_RS27700 0.72 +0.7 377,475 + AZOBR_RS27700 0.72 -1.2 377,476 - AZOBR_RS27700 0.72 +0.1 377,520 + AZOBR_RS27700 0.76 -1.2 377,520 + AZOBR_RS27700 0.76 +0.4 377,520 + AZOBR_RS27700 0.76 +0.1 377,520 + AZOBR_RS27700 0.76 +2.1 377,520 + AZOBR_RS27700 0.76 +0.9 377,520 + AZOBR_RS27700 0.76 -0.0 377,521 - AZOBR_RS27700 0.76 -3.3 377,589 + AZOBR_RS27700 0.81 +0.2 377,589 + AZOBR_RS27700 0.81 -3.6 377,801 - -0.6 378,196 + AZOBR_RS27705 0.13 -1.2 378,196 + AZOBR_RS27705 0.13 -0.6 378,337 + AZOBR_RS27705 0.18 +0.6 378,364 + AZOBR_RS27705 0.19 -2.5 379,127 - AZOBR_RS27705 0.47 +1.5 379,394 - AZOBR_RS27705 0.57 -1.2 379,394 - AZOBR_RS27705 0.57 -0.3 379,693 + AZOBR_RS27705 0.68 +0.4 380,218 + AZOBR_RS27705 0.87 -0.5 380,219 - AZOBR_RS27705 0.87 -0.1 380,219 - AZOBR_RS27705 0.87 +0.5 380,219 - AZOBR_RS27705 0.87 +0.2 380,281 + AZOBR_RS27705 0.89 -1.7 380,282 - AZOBR_RS27705 0.89 -2.1 380,282 - AZOBR_RS27705 0.89 +0.5 380,408 - -1.6 380,524 + +0.7 380,525 - -0.6 380,669 + -0.5 380,814 - -0.2 380,814 - +0.6 380,825 + -3.4 381,127 + AZOBR_RS27710 0.12 +0.3 381,286 + AZOBR_RS27710 0.33 +0.3 381,287 - AZOBR_RS27710 0.33 +0.4 381,287 - AZOBR_RS27710 0.33 -0.3 381,287 - AZOBR_RS27710 0.33 +0.2 381,484 + AZOBR_RS27710 0.58 +0.3 381,484 + AZOBR_RS27710 0.58 -1.6 381,484 + AZOBR_RS27710 0.58 +1.1 381,484 + AZOBR_RS27710 0.58 -1.0 381,485 - AZOBR_RS27710 0.58 -0.2 381,485 - AZOBR_RS27710 0.58 +0.1 381,504 - AZOBR_RS27710 0.61 -0.6 381,520 + AZOBR_RS27710 0.63 +0.8 381,520 + AZOBR_RS27710 0.63 -0.0 381,521 - AZOBR_RS27710 0.63 +0.0 381,521 - AZOBR_RS27710 0.63 -0.6
Or see this region's nucleotide sequence