Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27555 and AZOBR_RS27560 are separated by 482 nucleotides AZOBR_RS27560 and AZOBR_RS27565 are separated by 14 nucleotides AZOBR_RS27565 and AZOBR_RS27570 are separated by 84 nucleotides AZOBR_RS27570 and AZOBR_RS27575 are separated by 51 nucleotides
AZOBR_RS27555: AZOBR_RS27555 - hypothetical protein, at 344,289 to 344,822
_RS27555
AZOBR_RS27560: AZOBR_RS27560 - hypothetical protein, at 345,305 to 345,634
_RS27560
AZOBR_RS27565: AZOBR_RS27565 - GntR family transcriptional regulator, at 345,649 to 347,049
_RS27565
AZOBR_RS27570: AZOBR_RS27570 - MerR family transcriptional regulator, at 347,134 to 347,565
_RS27570
AZOBR_RS27575: AZOBR_RS27575 - arsenic resistance protein, at 347,617 to 348,579
_RS27575
Position (kb) 345
346
347
348 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 344.822 kb on + strand at 344.823 kb on - strand at 344.823 kb on - strand at 345.025 kb on + strand at 345.026 kb on + strand at 345.026 kb on - strand at 345.026 kb on - strand at 345.026 kb on - strand at 345.102 kb on + strand at 345.103 kb on - strand at 345.103 kb on - strand at 345.103 kb on - strand at 345.103 kb on - strand at 345.103 kb on - strand at 345.805 kb on + strand, within AZOBR_RS27565 at 345.805 kb on + strand, within AZOBR_RS27565 at 345.806 kb on - strand, within AZOBR_RS27565 at 345.859 kb on + strand, within AZOBR_RS27565 at 345.860 kb on - strand, within AZOBR_RS27565 at 345.860 kb on - strand, within AZOBR_RS27565 at 346.078 kb on + strand, within AZOBR_RS27565 at 346.078 kb on + strand, within AZOBR_RS27565 at 346.259 kb on - strand, within AZOBR_RS27565 at 346.381 kb on + strand, within AZOBR_RS27565 at 346.381 kb on + strand, within AZOBR_RS27565 at 346.381 kb on + strand, within AZOBR_RS27565 at 346.381 kb on + strand, within AZOBR_RS27565 at 346.382 kb on - strand, within AZOBR_RS27565 at 346.382 kb on - strand, within AZOBR_RS27565 at 346.470 kb on + strand, within AZOBR_RS27565 at 346.613 kb on - strand, within AZOBR_RS27565 at 346.846 kb on + strand, within AZOBR_RS27565 at 346.846 kb on + strand, within AZOBR_RS27565 at 346.846 kb on + strand, within AZOBR_RS27565 at 346.890 kb on - strand, within AZOBR_RS27565 at 346.966 kb on + strand at 346.966 kb on + strand at 347.047 kb on + strand at 347.048 kb on - strand at 347.052 kb on + strand at 347.206 kb on + strand, within AZOBR_RS27570 at 347.207 kb on - strand, within AZOBR_RS27570 at 347.254 kb on + strand, within AZOBR_RS27570 at 347.254 kb on + strand, within AZOBR_RS27570 at 347.761 kb on + strand, within AZOBR_RS27575 at 347.762 kb on - strand, within AZOBR_RS27575 at 347.956 kb on + strand, within AZOBR_RS27575 at 347.957 kb on - strand, within AZOBR_RS27575 at 347.957 kb on - strand, within AZOBR_RS27575
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 344,822 + -0.5 344,823 - +0.5 344,823 - +0.8 345,025 + +1.1 345,026 + +0.6 345,026 - -0.0 345,026 - -1.8 345,026 - -1.3 345,102 + +0.3 345,103 - +1.9 345,103 - +2.1 345,103 - -0.1 345,103 - -0.5 345,103 - -0.4 345,805 + AZOBR_RS27565 0.11 -0.8 345,805 + AZOBR_RS27565 0.11 -1.2 345,806 - AZOBR_RS27565 0.11 -0.0 345,859 + AZOBR_RS27565 0.15 +3.0 345,860 - AZOBR_RS27565 0.15 +0.7 345,860 - AZOBR_RS27565 0.15 -0.0 346,078 + AZOBR_RS27565 0.31 -0.9 346,078 + AZOBR_RS27565 0.31 +0.8 346,259 - AZOBR_RS27565 0.44 -1.1 346,381 + AZOBR_RS27565 0.52 -0.8 346,381 + AZOBR_RS27565 0.52 -3.3 346,381 + AZOBR_RS27565 0.52 -0.2 346,381 + AZOBR_RS27565 0.52 -0.5 346,382 - AZOBR_RS27565 0.52 +1.1 346,382 - AZOBR_RS27565 0.52 -0.5 346,470 + AZOBR_RS27565 0.59 -1.0 346,613 - AZOBR_RS27565 0.69 +0.1 346,846 + AZOBR_RS27565 0.85 +0.1 346,846 + AZOBR_RS27565 0.85 -0.6 346,846 + AZOBR_RS27565 0.85 +1.4 346,890 - AZOBR_RS27565 0.89 +1.1 346,966 + -0.6 346,966 + -0.6 347,047 + +0.1 347,048 - -0.2 347,052 + +2.5 347,206 + AZOBR_RS27570 0.17 +0.3 347,207 - AZOBR_RS27570 0.17 +0.5 347,254 + AZOBR_RS27570 0.28 +0.4 347,254 + AZOBR_RS27570 0.28 +0.2 347,761 + AZOBR_RS27575 0.15 +0.5 347,762 - AZOBR_RS27575 0.15 -1.6 347,956 + AZOBR_RS27575 0.35 +0.1 347,957 - AZOBR_RS27575 0.35 -0.9 347,957 - AZOBR_RS27575 0.35 -1.5
Or see this region's nucleotide sequence