Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25425 and AZOBR_RS25430 are separated by 32 nucleotides AZOBR_RS25430 and AZOBR_RS25435 overlap by 4 nucleotides AZOBR_RS25435 and AZOBR_RS25440 overlap by 4 nucleotides AZOBR_RS25440 and AZOBR_RS25445 are separated by 23 nucleotides
AZOBR_RS25425: AZOBR_RS25425 - dioxygenase, at 758,205 to 758,987
_RS25425
AZOBR_RS25430: AZOBR_RS25430 - Citrate lyase, at 759,020 to 759,871
_RS25430
AZOBR_RS25435: AZOBR_RS25435 - oxidoreductase, at 759,868 to 761,352
_RS25435
AZOBR_RS25440: AZOBR_RS25440 - hypothetical protein, at 761,349 to 761,804
_RS25440
AZOBR_RS25445: AZOBR_RS25445 - peptidase M19, at 761,828 to 762,811
_RS25445
Position (kb) 759
760
761
762 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 759.357 kb on + strand, within AZOBR_RS25430 at 759.498 kb on + strand, within AZOBR_RS25430 at 759.498 kb on + strand, within AZOBR_RS25430 at 759.699 kb on + strand, within AZOBR_RS25430 at 759.699 kb on + strand, within AZOBR_RS25430 at 759.700 kb on - strand, within AZOBR_RS25430 at 759.935 kb on + strand at 759.935 kb on + strand at 760.104 kb on - strand, within AZOBR_RS25435 at 760.544 kb on + strand, within AZOBR_RS25435 at 760.853 kb on + strand, within AZOBR_RS25435 at 760.946 kb on + strand, within AZOBR_RS25435 at 760.958 kb on + strand, within AZOBR_RS25435 at 760.958 kb on + strand, within AZOBR_RS25435 at 760.958 kb on + strand, within AZOBR_RS25435 at 761.027 kb on + strand, within AZOBR_RS25435 at 761.599 kb on + strand, within AZOBR_RS25440 at 761.600 kb on - strand, within AZOBR_RS25440 at 762.036 kb on + strand, within AZOBR_RS25445 at 762.110 kb on + strand, within AZOBR_RS25445 at 762.110 kb on + strand, within AZOBR_RS25445 at 762.241 kb on + strand, within AZOBR_RS25445 at 762.285 kb on + strand, within AZOBR_RS25445 at 762.286 kb on - strand, within AZOBR_RS25445 at 762.286 kb on - strand, within AZOBR_RS25445
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 759,357 + AZOBR_RS25430 0.40 -0.3 759,498 + AZOBR_RS25430 0.56 -0.9 759,498 + AZOBR_RS25430 0.56 -1.6 759,699 + AZOBR_RS25430 0.80 +1.7 759,699 + AZOBR_RS25430 0.80 +0.6 759,700 - AZOBR_RS25430 0.80 +0.1 759,935 + -0.8 759,935 + +0.1 760,104 - AZOBR_RS25435 0.16 -2.1 760,544 + AZOBR_RS25435 0.46 +0.4 760,853 + AZOBR_RS25435 0.66 +0.0 760,946 + AZOBR_RS25435 0.73 +1.1 760,958 + AZOBR_RS25435 0.73 +0.0 760,958 + AZOBR_RS25435 0.73 -2.9 760,958 + AZOBR_RS25435 0.73 +0.4 761,027 + AZOBR_RS25435 0.78 +0.7 761,599 + AZOBR_RS25440 0.55 -1.6 761,600 - AZOBR_RS25440 0.55 -2.2 762,036 + AZOBR_RS25445 0.21 +0.1 762,110 + AZOBR_RS25445 0.29 -0.2 762,110 + AZOBR_RS25445 0.29 -2.6 762,241 + AZOBR_RS25445 0.42 +0.1 762,285 + AZOBR_RS25445 0.46 +0.7 762,286 - AZOBR_RS25445 0.47 +0.2 762,286 - AZOBR_RS25445 0.47 -0.4
Or see this region's nucleotide sequence