Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23910 and AZOBR_RS23915 are separated by 439 nucleotides AZOBR_RS23915 and AZOBR_RS23920 are separated by 2 nucleotides AZOBR_RS23920 and AZOBR_RS23925 are separated by 4 nucleotides
AZOBR_RS23910: AZOBR_RS23910 - N-carbamoylsarcosine amidase, at 395,101 to 395,730
_RS23910
AZOBR_RS23915: AZOBR_RS23915 - ABC transporter substrate-binding protein, at 396,170 to 397,660
_RS23915
AZOBR_RS23920: AZOBR_RS23920 - peptide ABC transporter permease, at 397,663 to 398,601
_RS23920
AZOBR_RS23925: AZOBR_RS23925 - peptide ABC transporter permease, at 398,606 to 399,493
_RS23925
Position (kb) 396
397
398 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 395.711 kb on + strand at 395.711 kb on + strand at 395.711 kb on + strand at 395.711 kb on + strand at 395.711 kb on + strand at 395.711 kb on + strand at 395.711 kb on + strand at 395.711 kb on + strand at 395.712 kb on - strand at 395.712 kb on - strand at 395.785 kb on + strand at 395.786 kb on - strand at 396.077 kb on - strand at 396.077 kb on - strand at 396.326 kb on + strand, within AZOBR_RS23915 at 396.327 kb on - strand, within AZOBR_RS23915 at 396.399 kb on - strand, within AZOBR_RS23915 at 396.513 kb on - strand, within AZOBR_RS23915 at 396.513 kb on - strand, within AZOBR_RS23915 at 396.607 kb on + strand, within AZOBR_RS23915 at 396.764 kb on + strand, within AZOBR_RS23915 at 396.765 kb on - strand, within AZOBR_RS23915 at 396.765 kb on - strand, within AZOBR_RS23915 at 396.765 kb on - strand, within AZOBR_RS23915 at 397.133 kb on + strand, within AZOBR_RS23915 at 397.436 kb on + strand, within AZOBR_RS23915 at 397.436 kb on + strand, within AZOBR_RS23915 at 397.505 kb on + strand, within AZOBR_RS23915 at 397.506 kb on - strand, within AZOBR_RS23915 at 397.506 kb on - strand, within AZOBR_RS23915 at 397.506 kb on - strand, within AZOBR_RS23915 at 397.506 kb on - strand, within AZOBR_RS23915 at 397.506 kb on - strand, within AZOBR_RS23915 at 397.768 kb on + strand, within AZOBR_RS23920 at 397.768 kb on + strand, within AZOBR_RS23920 at 397.768 kb on + strand, within AZOBR_RS23920 at 397.769 kb on - strand, within AZOBR_RS23920 at 397.769 kb on - strand, within AZOBR_RS23920 at 397.843 kb on + strand, within AZOBR_RS23920 at 397.843 kb on + strand, within AZOBR_RS23920 at 397.843 kb on + strand, within AZOBR_RS23920 at 397.861 kb on + strand, within AZOBR_RS23920 at 397.861 kb on + strand, within AZOBR_RS23920 at 397.862 kb on - strand, within AZOBR_RS23920 at 397.862 kb on - strand, within AZOBR_RS23920 at 397.862 kb on - strand, within AZOBR_RS23920 at 397.862 kb on - strand, within AZOBR_RS23920 at 397.862 kb on - strand, within AZOBR_RS23920 at 398.239 kb on + strand, within AZOBR_RS23920 at 398.239 kb on + strand, within AZOBR_RS23920 at 398.239 kb on + strand, within AZOBR_RS23920 at 398.240 kb on - strand, within AZOBR_RS23920 at 398.240 kb on - strand, within AZOBR_RS23920 at 398.240 kb on - strand, within AZOBR_RS23920 at 398.491 kb on + strand, within AZOBR_RS23920 at 398.491 kb on + strand, within AZOBR_RS23920
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 395,711 + +1.6 395,711 + -0.6 395,711 + +1.4 395,711 + -0.8 395,711 + +0.8 395,711 + +0.6 395,711 + -0.1 395,711 + +0.0 395,712 - -0.9 395,712 - -0.3 395,785 + -0.7 395,786 - +0.8 396,077 - +0.1 396,077 - -0.8 396,326 + AZOBR_RS23915 0.10 +0.6 396,327 - AZOBR_RS23915 0.11 -0.9 396,399 - AZOBR_RS23915 0.15 +2.1 396,513 - AZOBR_RS23915 0.23 -1.6 396,513 - AZOBR_RS23915 0.23 +0.3 396,607 + AZOBR_RS23915 0.29 -0.8 396,764 + AZOBR_RS23915 0.40 -1.2 396,765 - AZOBR_RS23915 0.40 -0.7 396,765 - AZOBR_RS23915 0.40 -3.1 396,765 - AZOBR_RS23915 0.40 -0.0 397,133 + AZOBR_RS23915 0.65 -0.6 397,436 + AZOBR_RS23915 0.85 -0.7 397,436 + AZOBR_RS23915 0.85 -0.7 397,505 + AZOBR_RS23915 0.90 -0.0 397,506 - AZOBR_RS23915 0.90 -0.9 397,506 - AZOBR_RS23915 0.90 +0.1 397,506 - AZOBR_RS23915 0.90 -0.8 397,506 - AZOBR_RS23915 0.90 +0.7 397,506 - AZOBR_RS23915 0.90 +0.1 397,768 + AZOBR_RS23920 0.11 +1.2 397,768 + AZOBR_RS23920 0.11 -0.0 397,768 + AZOBR_RS23920 0.11 -0.4 397,769 - AZOBR_RS23920 0.11 +1.8 397,769 - AZOBR_RS23920 0.11 -0.7 397,843 + AZOBR_RS23920 0.19 +0.6 397,843 + AZOBR_RS23920 0.19 -0.3 397,843 + AZOBR_RS23920 0.19 -0.4 397,861 + AZOBR_RS23920 0.21 -0.1 397,861 + AZOBR_RS23920 0.21 +0.0 397,862 - AZOBR_RS23920 0.21 -0.2 397,862 - AZOBR_RS23920 0.21 -0.3 397,862 - AZOBR_RS23920 0.21 -0.3 397,862 - AZOBR_RS23920 0.21 +0.2 397,862 - AZOBR_RS23920 0.21 -1.0 398,239 + AZOBR_RS23920 0.61 +0.4 398,239 + AZOBR_RS23920 0.61 -0.7 398,239 + AZOBR_RS23920 0.61 +0.2 398,240 - AZOBR_RS23920 0.61 +0.3 398,240 - AZOBR_RS23920 0.61 +1.1 398,240 - AZOBR_RS23920 0.61 +0.2 398,491 + AZOBR_RS23920 0.88 +0.8 398,491 + AZOBR_RS23920 0.88 +0.2
Or see this region's nucleotide sequence