Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS20635 and AZOBR_RS20640 are separated by 265 nucleotides AZOBR_RS20640 and AZOBR_RS20645 overlap by 1 nucleotides AZOBR_RS20645 and AZOBR_RS20650 are separated by 21 nucleotides
AZOBR_RS20635: AZOBR_RS20635 - putative methyl-accepting chemotaxis protein, at 1,389,331 to 1,391,007
_RS20635
AZOBR_RS20640: AZOBR_RS20640 - glutamyl-tRNA amidotransferase subunit C, at 1,391,273 to 1,391,560
_RS20640
AZOBR_RS20645: AZOBR_RS20645 - glutamyl-tRNA(Gln) amidotransferase, at 1,391,560 to 1,393,041
_RS20645
AZOBR_RS20650: AZOBR_RS20650 - glutamyl-tRNA amidotransferase subunit B, at 1,393,063 to 1,394,514
_RS20650
Position (kb)
1391
1392
1393
1394 Strain fitness (log2 ratio)
-2
-1
0
1 at 1390.731 kb on - strand, within AZOBR_RS20635 at 1390.784 kb on + strand, within AZOBR_RS20635 at 1390.817 kb on + strand, within AZOBR_RS20635 at 1390.818 kb on - strand, within AZOBR_RS20635 at 1390.818 kb on - strand, within AZOBR_RS20635 at 1390.818 kb on - strand, within AZOBR_RS20635 at 1390.832 kb on + strand, within AZOBR_RS20635 at 1390.833 kb on - strand, within AZOBR_RS20635 at 1391.063 kb on - strand at 1391.077 kb on - strand at 1391.155 kb on + strand at 1391.156 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 1,390,731 - AZOBR_RS20635 0.83 +0.9 1,390,784 + AZOBR_RS20635 0.87 +0.0 1,390,817 + AZOBR_RS20635 0.89 -0.5 1,390,818 - AZOBR_RS20635 0.89 -0.2 1,390,818 - AZOBR_RS20635 0.89 -1.2 1,390,818 - AZOBR_RS20635 0.89 +0.5 1,390,832 + AZOBR_RS20635 0.90 -0.1 1,390,833 - AZOBR_RS20635 0.90 -0.5 1,391,063 - +0.4 1,391,077 - -0.6 1,391,155 + -2.7 1,391,156 - -1.3
Or see this region's nucleotide sequence