Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS19595
Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chlorite 1 mM |
---|---|---|---|---|---|
remove | |||||
1,166,445 | + | AZOBR_RS19590 | 0.78 | -0.8 | |
1,166,707 | - | +0.6 | |||
1,166,707 | - | +0.2 | |||
1,166,801 | + | -0.5 | |||
1,167,489 | - | AZOBR_RS19595 | 0.48 | +0.9 | |
1,167,489 | - | AZOBR_RS19595 | 0.48 | +0.7 | |
1,167,489 | - | AZOBR_RS19595 | 0.48 | -3.0 | |
1,167,489 | - | AZOBR_RS19595 | 0.48 | +0.2 | |
1,167,972 | - | +0.1 | |||
1,167,972 | - | +0.3 | |||
1,167,972 | - | -1.4 | |||
1,168,068 | - | +0.2 | |||
1,168,068 | - | -0.1 | |||
1,168,391 | + | AZOBR_RS19600 | 0.33 | +0.1 | |
1,168,391 | + | AZOBR_RS19600 | 0.33 | +1.0 | |
1,168,391 | + | AZOBR_RS19600 | 0.33 | -0.2 | |
1,168,413 | + | AZOBR_RS19600 | 0.37 | -0.8 | |
1,168,414 | - | AZOBR_RS19600 | 0.37 | -1.3 | |
1,168,418 | + | AZOBR_RS19600 | 0.38 | -1.5 | |
1,168,848 | + | +0.0 | |||
1,168,963 | + | +0.1 |
Or see this region's nucleotide sequence