Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13150 and AZOBR_RS13155 are separated by 46 nucleotides AZOBR_RS13155 and AZOBR_RS13160 are separated by 60 nucleotides
AZOBR_RS13150: AZOBR_RS13150 - ABC transporter substrate-binding protein, at 2,774,026 to 2,775,030
_RS13150
AZOBR_RS13155: AZOBR_RS13155 - acyl-CoA dehydrogenase, at 2,775,077 to 2,776,303
_RS13155
AZOBR_RS13160: AZOBR_RS13160 - histidine kinase, at 2,776,364 to 2,778,106
_RS13160
Position (kb)
2775
2776
2777 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2774.690 kb on - strand, within AZOBR_RS13150 at 2774.690 kb on - strand, within AZOBR_RS13150 at 2774.830 kb on + strand, within AZOBR_RS13150 at 2774.830 kb on + strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.941 kb on + strand at 2774.941 kb on + strand at 2774.942 kb on - strand at 2775.123 kb on + strand at 2775.389 kb on + strand, within AZOBR_RS13155 at 2775.389 kb on + strand, within AZOBR_RS13155 at 2775.593 kb on + strand, within AZOBR_RS13155 at 2775.593 kb on + strand, within AZOBR_RS13155 at 2775.887 kb on + strand, within AZOBR_RS13155 at 2776.252 kb on + strand at 2776.253 kb on - strand at 2776.253 kb on - strand at 2776.470 kb on + strand at 2776.471 kb on - strand at 2776.687 kb on - strand, within AZOBR_RS13160 at 2776.687 kb on - strand, within AZOBR_RS13160 at 2776.801 kb on - strand, within AZOBR_RS13160 at 2777.127 kb on + strand, within AZOBR_RS13160 at 2777.221 kb on - strand, within AZOBR_RS13160 at 2777.260 kb on - strand, within AZOBR_RS13160 at 2777.260 kb on - strand, within AZOBR_RS13160 at 2777.260 kb on - strand, within AZOBR_RS13160 at 2777.260 kb on - strand, within AZOBR_RS13160
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 2,774,690 - AZOBR_RS13150 0.66 -0.9 2,774,690 - AZOBR_RS13150 0.66 +0.0 2,774,830 + AZOBR_RS13150 0.80 -1.5 2,774,830 + AZOBR_RS13150 0.80 -1.0 2,774,831 - AZOBR_RS13150 0.80 +0.2 2,774,831 - AZOBR_RS13150 0.80 +0.3 2,774,831 - AZOBR_RS13150 0.80 +0.1 2,774,831 - AZOBR_RS13150 0.80 -1.6 2,774,831 - AZOBR_RS13150 0.80 -0.6 2,774,831 - AZOBR_RS13150 0.80 -4.1 2,774,941 + -0.3 2,774,941 + +0.3 2,774,942 - -0.3 2,775,123 + -0.6 2,775,389 + AZOBR_RS13155 0.25 -0.4 2,775,389 + AZOBR_RS13155 0.25 +0.7 2,775,593 + AZOBR_RS13155 0.42 +0.6 2,775,593 + AZOBR_RS13155 0.42 +0.9 2,775,887 + AZOBR_RS13155 0.66 +0.3 2,776,252 + +0.7 2,776,253 - +0.1 2,776,253 - +0.8 2,776,470 + +1.7 2,776,471 - -0.3 2,776,687 - AZOBR_RS13160 0.19 +0.6 2,776,687 - AZOBR_RS13160 0.19 -0.3 2,776,801 - AZOBR_RS13160 0.25 -0.9 2,777,127 + AZOBR_RS13160 0.44 -0.2 2,777,221 - AZOBR_RS13160 0.49 -0.8 2,777,260 - AZOBR_RS13160 0.51 -1.2 2,777,260 - AZOBR_RS13160 0.51 +2.0 2,777,260 - AZOBR_RS13160 0.51 +0.0 2,777,260 - AZOBR_RS13160 0.51 -2.6
Or see this region's nucleotide sequence