Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13135 and AZOBR_RS13140 are separated by 72 nucleotides AZOBR_RS13140 and AZOBR_RS13145 are separated by 28 nucleotides AZOBR_RS13145 and AZOBR_RS13150 are separated by 39 nucleotides
AZOBR_RS13135: AZOBR_RS13135 - hypothetical protein, at 2,772,228 to 2,772,440
_RS13135
AZOBR_RS13140: AZOBR_RS13140 - glyoxylate reductase (NADP+), at 2,772,513 to 2,773,172
_RS13140
AZOBR_RS13145: AZOBR_RS13145 - hypothetical protein, at 2,773,201 to 2,773,986
_RS13145
AZOBR_RS13150: AZOBR_RS13150 - ABC transporter substrate-binding protein, at 2,774,026 to 2,775,030
_RS13150
Position (kb)
2773
2774 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2772.419 kb on + strand at 2772.448 kb on + strand at 2772.448 kb on + strand at 2772.525 kb on + strand at 2772.526 kb on - strand at 2772.526 kb on - strand at 2772.529 kb on + strand at 2772.529 kb on + strand at 2772.529 kb on + strand at 2772.529 kb on + strand at 2772.530 kb on - strand at 2772.530 kb on - strand at 2772.530 kb on - strand at 2772.530 kb on - strand at 2772.530 kb on - strand at 2773.021 kb on - strand, within AZOBR_RS13140 at 2773.119 kb on + strand at 2773.119 kb on + strand at 2773.119 kb on + strand at 2773.167 kb on + strand at 2773.331 kb on - strand, within AZOBR_RS13145 at 2773.336 kb on + strand, within AZOBR_RS13145 at 2773.337 kb on - strand, within AZOBR_RS13145 at 2773.577 kb on - strand, within AZOBR_RS13145 at 2773.642 kb on + strand, within AZOBR_RS13145 at 2773.643 kb on - strand, within AZOBR_RS13145 at 2773.643 kb on - strand, within AZOBR_RS13145 at 2773.669 kb on + strand, within AZOBR_RS13145 at 2773.670 kb on - strand, within AZOBR_RS13145 at 2773.670 kb on - strand, within AZOBR_RS13145 at 2773.670 kb on - strand, within AZOBR_RS13145 at 2774.690 kb on - strand, within AZOBR_RS13150 at 2774.690 kb on - strand, within AZOBR_RS13150 at 2774.830 kb on + strand, within AZOBR_RS13150 at 2774.830 kb on + strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.941 kb on + strand at 2774.941 kb on + strand at 2774.942 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 2,772,419 + +1.1 2,772,448 + +0.6 2,772,448 + -0.3 2,772,525 + -0.1 2,772,526 - -0.6 2,772,526 - +0.2 2,772,529 + -0.4 2,772,529 + -0.3 2,772,529 + +0.8 2,772,529 + +1.2 2,772,530 - -0.6 2,772,530 - -0.5 2,772,530 - -0.7 2,772,530 - +0.9 2,772,530 - +0.2 2,773,021 - AZOBR_RS13140 0.77 -0.2 2,773,119 + +0.3 2,773,119 + +0.2 2,773,119 + +0.3 2,773,167 + -0.6 2,773,331 - AZOBR_RS13145 0.17 +0.7 2,773,336 + AZOBR_RS13145 0.17 +0.7 2,773,337 - AZOBR_RS13145 0.17 -0.7 2,773,577 - AZOBR_RS13145 0.48 +0.0 2,773,642 + AZOBR_RS13145 0.56 +0.2 2,773,643 - AZOBR_RS13145 0.56 +0.5 2,773,643 - AZOBR_RS13145 0.56 +0.2 2,773,669 + AZOBR_RS13145 0.60 +1.7 2,773,670 - AZOBR_RS13145 0.60 -0.1 2,773,670 - AZOBR_RS13145 0.60 +0.0 2,773,670 - AZOBR_RS13145 0.60 -0.2 2,774,690 - AZOBR_RS13150 0.66 -0.9 2,774,690 - AZOBR_RS13150 0.66 +0.0 2,774,830 + AZOBR_RS13150 0.80 -1.5 2,774,830 + AZOBR_RS13150 0.80 -1.0 2,774,831 - AZOBR_RS13150 0.80 +0.2 2,774,831 - AZOBR_RS13150 0.80 +0.3 2,774,831 - AZOBR_RS13150 0.80 +0.1 2,774,831 - AZOBR_RS13150 0.80 -1.6 2,774,831 - AZOBR_RS13150 0.80 -0.6 2,774,831 - AZOBR_RS13150 0.80 -4.1 2,774,941 + -0.3 2,774,941 + +0.3 2,774,942 - -0.3
Or see this region's nucleotide sequence