Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS13135
Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chlorite 1 mM |
---|---|---|---|---|---|
remove | |||||
2,771,540 | + | -0.3 | |||
2,771,540 | + | +1.3 | |||
2,771,540 | + | -0.7 | |||
2,771,540 | + | +0.4 | |||
2,771,541 | - | +2.9 | |||
2,771,579 | + | -0.1 | |||
2,772,048 | + | +0.2 | |||
2,772,049 | - | +1.8 | |||
2,772,049 | - | +0.4 | |||
2,772,051 | + | +0.2 | |||
2,772,052 | - | +0.5 | |||
2,772,052 | - | +0.7 | |||
2,772,052 | - | +0.3 | |||
2,772,114 | + | -0.4 | |||
2,772,114 | + | -0.1 | |||
2,772,114 | + | -0.1 | |||
2,772,115 | - | +0.5 | |||
2,772,115 | - | +0.8 | |||
2,772,115 | - | -2.5 | |||
2,772,419 | + | +1.1 | |||
2,772,448 | + | +0.6 | |||
2,772,448 | + | -0.3 | |||
2,772,525 | + | -0.1 | |||
2,772,526 | - | -0.6 | |||
2,772,526 | - | +0.2 | |||
2,772,529 | + | -0.4 | |||
2,772,529 | + | -0.3 | |||
2,772,529 | + | +0.8 | |||
2,772,529 | + | +1.2 | |||
2,772,530 | - | -0.6 | |||
2,772,530 | - | -0.5 | |||
2,772,530 | - | -0.7 | |||
2,772,530 | - | +0.9 | |||
2,772,530 | - | +0.2 | |||
2,773,021 | - | AZOBR_RS13140 | 0.77 | -0.2 | |
2,773,119 | + | +0.3 | |||
2,773,119 | + | +0.2 | |||
2,773,119 | + | +0.3 | |||
2,773,167 | + | -0.6 | |||
2,773,331 | - | AZOBR_RS13145 | 0.17 | +0.7 | |
2,773,336 | + | AZOBR_RS13145 | 0.17 | +0.7 | |
2,773,337 | - | AZOBR_RS13145 | 0.17 | -0.7 |
Or see this region's nucleotide sequence