Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS11090
Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chlorite 1 mM |
---|---|---|---|---|---|
remove | |||||
2,331,875 | + | AZOBR_RS11080 | 0.50 | -1.3 | |
2,331,875 | + | AZOBR_RS11080 | 0.50 | -2.4 | |
2,331,875 | + | AZOBR_RS11080 | 0.50 | -0.4 | |
2,331,876 | - | AZOBR_RS11080 | 0.51 | +0.1 | |
2,332,013 | + | AZOBR_RS11080 | 0.67 | -0.2 | |
2,332,013 | + | AZOBR_RS11080 | 0.67 | +0.7 | |
2,332,013 | + | AZOBR_RS11080 | 0.67 | -1.6 | |
2,332,013 | + | AZOBR_RS11080 | 0.67 | -0.1 | |
2,332,013 | + | AZOBR_RS11080 | 0.67 | -1.3 | |
2,332,014 | - | AZOBR_RS11080 | 0.67 | +0.4 | |
2,332,014 | - | AZOBR_RS11080 | 0.67 | +0.7 | |
2,332,014 | - | AZOBR_RS11080 | 0.67 | -2.6 | |
2,332,014 | - | AZOBR_RS11080 | 0.67 | +1.3 | |
2,332,014 | - | AZOBR_RS11080 | 0.67 | +0.4 | |
2,332,080 | - | AZOBR_RS11080 | 0.75 | -1.8 | |
2,332,086 | - | AZOBR_RS11080 | 0.75 | -0.7 | |
2,332,268 | + | +0.0 | |||
2,332,268 | + | -0.3 | |||
2,332,268 | + | +1.0 | |||
2,332,268 | + | +0.5 | |||
2,332,742 | + | +0.9 | |||
2,332,742 | + | -1.5 | |||
2,335,854 | - | +1.7 | |||
2,336,074 | - | AZOBR_RS11095 | 0.12 | -1.6 | |
2,336,119 | - | AZOBR_RS11095 | 0.16 | -2.6 | |
2,336,343 | + | AZOBR_RS11095 | 0.36 | -1.0 |
Or see this region's nucleotide sequence